Query= MSMg01no524_g17.b1 MSMg01no524_g17.b1 CHROMAT_FILE:
MSMg01no524_g17.b1 PHD_FILE: MSMg01no524_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:41 2005
(708 letters)
>mm_chr9_5496678_5497785
Length = 1108
Score = 1307 bits (676), Expect = 0.0
Identities = 697/704 (99%)
Strand = Plus / Minus
Query: 5 gaattcttgactccttcatttattttacagacttcattccccctagtgctaggaattgtc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 gaattcttgactccttgatttattttacagacttcattccccctagtgctaggaattgtc 849
Query: 65 tcccttctcctttttcctacagacaatgagaggcaacatcaaggttcatttcagatgttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tcccttctcctttttcctacagacaatgagaggcaacatcaaggttcatttcagatgttg 789
Query: 125 aattgttttaagttacctttgttcatagtacaagtgatggagattcagctataccaatat 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 788 aattgttttaagttacctttgttcatagtacaggtgatggagattcagctataccaatat 729
Query: 185 taattgtcatgtcctcaactaaacccagattaacattgattttaaaataagaatcaggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 taattgtcatgtcctcaactaaacccagattaacattgattttaaaataagaatcaggaa 669
Query: 245 acattgggttttctaagactgttttgtttcagctgctatctacttaaatatatttaatag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acattgggttttctaagactgttttgtttcagctgctatctacttaaatatatttaatag 609
Query: 305 ttgttttaatacttagtttgtttggactattttggtttctgtttggggatcttctggcag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ttgttttaatacttagtttgtttggactattttggtttctgtttggggatcttctggcag 549
Query: 365 tagttcatgggtttatgtagtgtctggggtttaattcacactaggaagagatgccacatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tagttcatgggtttatgtagtgtctggggtttaattcacactaggaagagatgccacatg 489
Query: 425 gtctcttgaatgatcttactgggaaatgtacagataaaatcaacccagctcttccagact 484
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 488 gtctcttgaatgatcttactgggaaatgaacagataaaatcaaccctgctcttccagact 429
Query: 485 cattttttgccatcttttgctaccatctgtgcttccagcccaaattaaattgagaattaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cattttttgccatcttttgctaccatctgtgcttccagcccaaattaaattgagaattaa 369
Query: 545 aatagagaatgcagcactttatttctgaaatcaggttcaggtttccacagcaacaaatca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatagagaatgcagcactttatttctgaaatcaggttcaggtttccacagcaacaaatca 309
Query: 605 tctaaatgtcagtctacgttagcatgatgggttagtctgtgctaactttggtttgaaatc 664
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 308 tctaaatgtcagtctacgttagcatgatgggtttgtctgtgctaactttggtttgaaatc 249
Query: 665 taactctgtatggtggtaggtgggtgactagttaatggagtcac 708
|| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 248 tatctctgtatggtggtaggtgggtgactagtcaatggagtcac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 708
Length of database: 1108
Length adjustment: 10
Effective length of query: 698
Effective length of database: 1098
Effective search space: 766404
Effective search space used: 766404
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no524_g17.g1 MSMg01no524_g17.g1 CHROMAT_FILE:
MSMg01no524_g17.g1 PHD_FILE: MSMg01no524_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:41 2005
(659 letters)
>mm_chr9_5336284_5337342
Length = 1059
Score = 1251 bits (647), Expect = 0.0
Identities = 656/659 (99%)
Strand = Plus / Plus
Query: 1 tctgtggaataaatatattcataatctacgtattctttgtctactctgcagaagcaacaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtggaataaatatatttataatctacgtattctttgtctactctgcagaagcaacaa 260
Query: 61 gcaactgaatctcatttcttcagcttgaagaagtgatcttggccaaggattacattctat 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gcaactgaatctcatttcttcagcttgaagaagtgatcttggccaaggatcacattctat 320
Query: 121 tcctgaaattccagaactagtgaaattaaggaaagaatacttatgaattcaagaccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgaaattccagaactagtgaaattaaggaaagaatacttatgaattcaagaccagcc 380
Query: 181 taagcaacacagtgggattctgttccatagacaagcaaacaagcaaaaataaaacaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagcaacacagtgggattctgttccatagacaagcaaacaagcaaaaataaaacaaaaa 440
Query: 241 aaaaatttaccaaaagagaaatttgttttatttatttgtgtacataaataaaaagaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaatttaccaaaagagaaatttgttttatttatttgtgtacataaataaaaagaaagc 500
Query: 301 aaataattgttttaagttgggttctttaatggagaatgttatttaaattaaagtggtagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaataattgttttaagttgggttctttaatggagaatgttatttaaattaaagtggtagt 560
Query: 361 aaattgaagtgatatggagtatcaagctgtagttttaaactttagggctcatatgatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaattgaagtgatatggagtatcaagctgtagttttaaactttagggctcatatgatatc 620
Query: 421 cacattactagaaagaaaaaaaaaggaaacagcaacaacagggaatttagctctgaattt 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 cacattactagaaagaaaaaaaaaagaaacagcaacaacagggaatttagctctgaattt 680
Query: 481 agcagtgagatgaaacaaaactgtaattgtaatggtcagcttttaatacccaactttaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagtgagatgaaacaaaactgtaattgtaatggtcagcttttaatacccaactttaca 740
Query: 541 gaatctaaagtatcttagtgagaagcctctgaccaagccagtgaagcattatgttgatta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaatctaaagtatcttagtgagaagcctctgaccaagccagtgaagcattatgttgatta 800
Query: 601 ggtcacatgatacaggaaggcctagcctaatagtgggaaggatcatatccaaaatctaa 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggtcacatgatacaggaaggcctagcctaatagtgggaaggatcatatccaaaatctaa 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
