XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGTG
GATTTGTGATAGCATCTGCATGGAGAGAGACTTCAGCAAAAGATAGAGGT
CTGTTAGAATAATAGACATGAGCAAAACAGAACCAAAAACAAACGAGAAT
CATCAGTTCTGTATACCAACAAGGTTGGTAACTATTTAGGCCCGAGAAGG
GCATACACACATGAAGTCAATGTACTGTTCATGTCAGTATATTGAGGGAT
GGGAGGGGCTTGCTGCATGGGCGAGGCCAACTGTTTCTATTTAGAAGACC
CATGTAGAATGTCAAACCTTCTACATCACCAAGTCTGCCCTCTGTCTAAC
AGGGAAGGAAACATGTCACAGAGAGGATTCATTTTATTCCATGGCATCCT
TATATCAAGGATAATGTTAAGAGAGACATCCTATGTGAGTGTTGGTTATA
AACTAAGTTTCTAAACTTCAGAGACATAGGCCTCTAGAAAGACCTGGGTG
AGGGGCAGCCCTGAGGGTGTAGTGGGCTCTGGGAGAACTGTGATTCTTCT
GTCCCTAACACATGGAACAGTACATTTTGTAGGAAGCCTGAATAACTCAA
GACTTAGTCCTGGCAGTGAAGAGAGTTTGCTATGAGGTAATAGCTTAAGA
GTATATAAATTATATAGAAGCCAGCTTGGACACTGATTCTCGATGGGTTA
TTAATTGGGGAAATATGTGTTACACGATTTTAGAATAAAGTTAACATTAT
AACACN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACTCTGTAGACCAGGCTGGTCTCGAACTCAGAA
ATCCACCTGCCTCTGCCTCCTAAGTGCTGGGATTAAAGGCATGTGCCACC
ACCTCCCGGCTCCTCCTTCTTTCTTATACCACTTAGGATCACCAGCCTAA
GGGTGCCACCATCCCTAGTGAGCTGGATTCTCCCACATCAATCCTTAGTA
AAGAAAATGCCCAGGGAAAGGCAAATCAAAACAACCCTGAGATTCCATCT
CACACCAGTCAGAATGTCTAAGATCAAAAACTCAGGTGACAGCAGATGCT
GGCCAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGATGGGATTAG
AAGATGGCACAACCACTCTGGAAATCATTTTGGTGGCTCCTCAGAAAATT
GGACATAGTACTACCTGAGGATCCAGCTATACTACTCCTGGGCATATACC
CATAAGATGCTCCTTTATGTCACTCCTTCTCTTGCTCCACTATGCTCTTA
GTTTCCTTATTCATCTATAGCTTTAACCCTTTTTGACACCCTCATTTCTT
TCTCTTAACAATGTCTTACCAAATATTGTGGTGATACCCCATCATTTCCC
TATTTTCCCTCCTTATTATATAATATTCTCATTCTTTCTCCTTATTTTTG
CCCCCGCGCTTTTTTCTTTTCCTCCCCCATAATCTCATTCTACTTTTTCT
CCACTCATCTTCTCTCTCCACCTTN

Query= MSMg01no525_f11.b1 MSMg01no525_f11.b1 CHROMAT_FILE:
MSMg01no525_f11.b1 PHD_FILE: MSMg01no525_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:55 2005
         (657 letters)



>mm_chr9_55164180_55165236
          Length = 1057

 Score = 1151 bits (595), Expect = 0.0
 Identities = 633/657 (96%), Gaps = 18/657 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatagcatctgcatggagagagacttcagcaaaagatagaggtctgttagaataatagac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gatagcatctgcatggagagagacttcagcaaaagatagaggtctgttagaataatagac 651

                                                                       
Query: 61  atgagcaaaacagaaccaaaaacaaacgagaatcatcagttctgtataccaacaaggttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atgagcaaaacagaaccaaaaacaaacgagaatcatcagttctgtataccaacaaggttg 591

                                                                       
Query: 121 gtaactatttaggcccgagaagggcatacacacatgaagtcaatgtactgttcatgtcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gtaactatttaggcccgagaagggcatacacacatgaagtcaatgtactgttcatgtcag 531

                                                                       
Query: 181 tatattgagggatgggaggggcttgctgcatgggcgaggccaactgtttctatttagaag 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tatattgagggatgggagggtcttgctgcatgggcgaggccaactgtttctatttagaag 471

                                                                       
Query: 241 acccatgtagaatgtcaaaccttctacatcaccaagtctgccctctgtctaacagggaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acccatgtagaatgtcaaaccttctacatcaccaagtctgccctctgtctaacagggaag 411

                                                                       
Query: 301 gaaacatgtcacagagaggattcattttattccatggcatccttatatcaaggataatgt 360
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 410 gaaacatgtcacagagaggattcattttattccatgacatccttatatcaaggataatgt 351

                                                                       
Query: 361 taagagagacatcctatgtgagtgttggttataaactaagtttctaaacttcagagacat 420
           |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 350 taagagagacatcctatgtgggtgttggttataaactaagtttctagacttcagagacat 291

                                                                       
Query: 421 aggcctctagaaagacctgggtgaggggcagccctgagggtgtagtgggctctgggagaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aggcctctagaaagacctgggtgaggggcagccctgagggtgtagtgggctctgggagaa 231

                                                                       
Query: 481 ctgtgattcttctgtccctaacacatggaacagtacattttgtaggaagcctgaataact 540
           ||||||| ||||||||||||||||||||||                  ||||||||||||
Sbjct: 230 ctgtgatgcttctgtccctaacacatggaa------------------gcctgaataact 189

                                                                       
Query: 541 caagacttagtcctggcagtgaagagagtttgctatgaggtaatagcttaagagtatata 600
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 188 caagacttagtcctggcagtgaagagagtttgctatgaggtaatagtttaagagtatata 129

                                                                    
Query: 601 aattatatagaagccagcttggacactgattctcgatgggttattaattggggaaat 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aattatatagaagccagcttggacactgattctcgatgggttattaattggggaaat 72


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)