Query= MSMg01no525_m10.b1 MSMg01no525_m10.b1 CHROMAT_FILE:
MSMg01no525_m10.b1 PHD_FILE: MSMg01no525_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:30 2005
(414 letters)
>mm_chr9_23990660_23991477
Length = 818
Score = 735 bits (380), Expect = 0.0
Identities = 408/418 (97%), Gaps = 4/418 (0%)
Strand = Plus / Minus
Query: 1 gtgtcttcctgagaaagagcacaaag--ttgtgccccatatctgcccctgtgtcctgacc 58
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 618 gtgtcttcctgagaatgagcacaaagtattgtgccccatatctgcccctgtgtcctgacc 559
Query: 59 g-ttttctccactgggattcaaatccctttcttgaaagtagaaagtctgtactttgctgt 117
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtttttctccaatgggattcaaatccctttcttgaaagtagaaagtctgtactttgctgt 499
Query: 118 actttttttcatagcctggcagtgtctgaggagtagttcttctgtctgctggatcatata 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 actttttttcatagcctggcagtgtctgaggagtagttcttctgtctgctggatcatata 439
Query: 178 tcggaggattccaatctctgtcttcctttgtctggctgtctgtgttttgataattgaatt 237
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 tcggaggattccaatctctgtcttcctttgtctggctgtctgtgttttgaaaattgaatt 379
Query: 238 taggtatggcatatagggctcgtgggcttggcgttgcttaatgcagctccatctgcttca 297
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 taggtatggcatagagggctcgtgggcttggcgttgcttaatgcagctccatctgcttca 319
Query: 298 taattagtgccagtttctctctgagtctgacatcagattgtctgtcactgtggtttgcca 357
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taattagtgccagtttctctgtgagtctgacatcagattgtctgtcactgtggtttgcca 259
Query: 358 tagtaatgagaatttca-tttttttcctcacattttgaaagtgagaaaacgggacagg 414
||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 258 tagtaatgagaatttcattttttttcctcacattttgaaagtgagaaaatgggacagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 818
Length adjustment: 9
Effective length of query: 405
Effective length of database: 809
Effective search space: 327645
Effective search space used: 327645
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_m10.g1 MSMg01no525_m10.g1 CHROMAT_FILE:
MSMg01no525_m10.g1 PHD_FILE: MSMg01no525_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:30 2005
(625 letters)
>mm_chr9_23819332_23820356
Length = 1025
Score = 1147 bits (593), Expect = 0.0
Identities = 617/625 (98%)
Strand = Plus / Plus
Query: 1 ccaagaagtgttagtggtggcaaaagaggaaaaatcttagtgacataaaaataatttctg 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 201 ccaagaagtgttagtggtggcaaaagaggaaaaatcttagtgatataaaaataattcctg 260
Query: 61 tctaagcagttaggcaatgaccctagctagacacaacttcagagtcaagtcacaggatag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 tctaagcagttaggcaatgaccctagctagacacaacttcagagtcaagtcacagggtag 320
Query: 121 agttgagatgcatgactataaatgttacagtggcaaagaacagaaacaggtcgagaaagg 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttgagatgcatgactatagatgttacagtggcaaagaacagaaacaggtcgagaaagg 380
Query: 181 ttattgggcagggcagggagggagtggaggtggggatagcaattccagatagaatcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattgggcagggcagggagggagtggaggtggggatagcaattccagatagaatcctgc 440
Query: 241 atcagtggtgaagactgagacatgtcgaagtccctgagcaagtgaaagtcctctgcctgt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagtggtgaagactgagccatgtcgaagtccctgagcaagtgaaagtcctctgcctgt 500
Query: 301 tgattgtttaacacacattggctggacacatcgtaggttctggtagcataactattgtaa 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 tgattgtttaacacacattggctggacacattgtaggttctggtagcataactattgtaa 560
Query: 361 tgctaggttccctgttctttgtgaagtcctggagagggtacaaaactcattttagtctgg 420
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 tgctaggtgccctgttctttgtgaagtcctggcgagggtacaaaactcattttagtctgg 620
Query: 421 tgtttaataccttcttgggtctagattttttaatgtaattttaatatatcctatgaacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtttaataccttcttgggtctagattttttaatgtaattttaatatatcctatgaacat 680
Query: 481 atgtgtcttagttgatgtcatattgctgtgaagagacaccatgatcatggcagctcttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtgtcttagttgatgtcatattgctgtgaagagacaccatgatcatggcagctcttat 740
Query: 541 gaaggaaagcatttaattagggcttgcttatcgtttcagaggtttagtccattattatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaaggaaagcatttaattagggcttgcttatcgtttcagaggtttagtccattattatga 800
Query: 601 tgacagaaagcatggtggtgagaag 625
|||||||||||||||||||||||||
Sbjct: 801 tgacagaaagcatggtggtgagaag 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
