Query= MSMg01no526_m07.b1 MSMg01no526_m07.b1 CHROMAT_FILE:
MSMg01no526_m07.b1 PHD_FILE: MSMg01no526_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:47 2005
(596 letters)
>mm_chr9_77169703_77170698
Length = 996
Score = 1123 bits (581), Expect = 0.0
Identities = 587/589 (99%)
Strand = Plus / Minus
Query: 8 ttcaaagggatcagctatcgacaggaaaagagacaaagaagttatagcagtacaggggga 67
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttcaaagggaacagctatcgacaggaaaagagacaaagaagttatagcagtacaggggga 737
Query: 68 tatttaggaggattttgacctggttgtgtctgttcactattaactgcatacaaaagcttc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tatttaggaggattttgacctggttgtgtctgttcactattaactgcatacaaaagcttc 677
Query: 128 aagatttctggtgattttcaatggttgtgctcttgatcatggcaagcagagtactttatg 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aagatttctggtgattttcaatggttgtgctcttgatcatggcaagcagagtactttatg 617
Query: 188 acacatctcttacaacatcctcaaagttgttttacagcctagtgctgcttcccctgaggc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 acacatctcttacaacatcctcaaagttgttttacagcctagtgctgcttcccctgaggc 557
Query: 248 agccttcagtcagagaagaagaaatttatacttccaatcagaagatgtaataaactgaaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agccttcagtcagagaagaagaaatttatacttccaatcagaagatgtaataaactgaaa 497
Query: 308 tgattaatcttgaaaactggcacgaatggaaagtttagtgtctcttctgtataatttatc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgattaatcttgaaaactggcacgaatggaaagtttagtgtctcttctgtataatttatc 437
Query: 368 catttttttgtatttgagtttattctgaaggtttttcatttatgaccacccccagccttc 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 catttttttgtatttgagtttattctgaaggtttttcatttatgaccacccccagccttc 377
Query: 428 cctaaagaaatctgctctatctacagtgccatgactttcctaatttgtgtgaagtatgtg 487
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 376 cctaaagaaatctgctctatctacagcgccatgactttcctaatttgtgtgaagtatgtg 317
Query: 488 gtccacccatctctttgtaaagtttactgagccaagggaactaaaatgctcaaaattgac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtccacccatctctttgtaaagtttactgagccaagggaactaaaatgctcaaaattgac 257
Query: 548 atagtgagtggggtctgctacacagaggggctggagactctcttttaga 596
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atagtgagtggggtctgctacacagaggggctggagactctcttttaga 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_m07.g1 MSMg01no526_m07.g1 CHROMAT_FILE:
MSMg01no526_m07.g1 PHD_FILE: MSMg01no526_m07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:48 2005
(510 letters)
>mm_chr9_76996264_76997172
Length = 909
Score = 963 bits (498), Expect = 0.0
Identities = 507/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 1 actgttttacatataccatcacaaaacccacaatactatgaaggagattctggctggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgttttacatataccatcacaaaacccacaatactatgaaggagattctggctggcta 260
Query: 61 catatattgaagatcagtctagtaaactaggcttcatagctgtgaatgtgagccatacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catatattgaagatcagtctagtaaactaggcttcatagctgtgaatgtgagccatacct 320
Query: 121 tctggttcacaaacctcaatttaaaaaaaaaagacatatttaaactaacacatctatttt 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggttcacaaacctcaattt-aaaaaaaaagacatatttaaactaacacatctatttt 379
Query: 181 aaaaactgatgtgaaccaaaaaaaggaatttatgaatcaagaaaaaatttagcatatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaaactgatgtgaaccaaaaaaaggaatttatgaatcaagaaaaaatttagcatatgtt 439
Query: 241 cagctatttcaaatcttctatacattttttaaaaataattgcaacctaattttggagata 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 cagctatttcaaatcttctatacattttttaaaaataattgcaacctaattttgaagata 499
Query: 301 gacttcagatcacagtatttcaagtgtatagtgtctggaaatggaatagtatgaagatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gacttcagatcacagtatttcaagtgtatagtgtctggaaatggaatagtatgaagatgg 559
Query: 361 ttgaagcagaaactcaacagaacagatggagaaaatagttcctaagcacatccgccgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgaagcagaaactcaacagaacagatggagaaaatagttcctaagcacatccgccgaag 619
Query: 421 agtgttaagataccatgtctttcacatttctctacttgtgttttatttcacacacttata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 620 agtgttaagataccatgtctttcacatttctctacttgtgttttatttcacacgcttata 679
Query: 481 ctgttcatatggacatatttacagaaattt 510
||||||||||||||||||||||||||||||
Sbjct: 680 ctgttcatatggacatatttacagaaattt 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
