GACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGNGN
GGAATTNTCAGATTCCTGAGTCTTCCTCACCTGCACTCTGTGAAGGGAGC
CTGGCACATCTATATATAGCATGGAAGTCCACTGCTGAGATCTAATGCTA
AGGAAAAGCTCCTTCCAAAATAGTGCCAGTGACTGACAGTGCCCCTGGTC
ACTCCAGAGCTTAGATAGAGACATACAAAGCAAATGCTTATCTCCTGCCT
GCTAACATGACATCTGGTCTACAGCTGGGGCCCTCGAGGAAGACTCGAGG
AAGACTATCAACTTTCAAATCTGATTATCTAAGTAATAGACTTTTTTTTT
TTTTTTTGAGACGGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCA
CTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCT
CCCGAGTGCTGGGATTAAAGGCGTGCGACACCACGCCCGGCTCAGTAATA
GACTTTTGTAAGGCTGCCACAGGTAAGGTTTTTTTCTAAAGGATCTGGTC
AGAGTTCATTCAAGAGCTTCTGGAGAACACACACCCATTGTAGATGTCTG
AAAGAACATCTGTGATTCAGGGGAAAGACCGAGACATCAACGTTAACAGG
AGTTTGGAAGAAAATGGTCTCTCTCACAGGTGACTTCCACAGATAGATTC
ACCTCACGTGTGGGGAAAACAGCNNAGAACCAGAATCAAAAGTGGAGTCT
GAAGACAAGCTGGGANGGCTGCAGTN

CATTTTATAAGGAGAGGGCCGCCTTTCATCAXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAAGACAGCCAGGGCTACCAGAGAAAGTCTGTCT
CAAATATCTAAATTTAATAAATTTATAAATTNAAATTAAACTTTTTAGNN
GATGATACTTNGCATCAAAAAACCTGGNAAACTGGGCCANGGGAGGGAAC
TTACAGCCAGAAGGACATTGGGGAAGGGAAGGGGCTTTTATAAGAAANNN
NAAANNCANNANCACAANAAAANNCAAACNCACCCNCCCCNCCCACCCCC
CNCCTCCCCNTCCNNTCNCCCCACCNACCCCCCCACCACANNNNAAACCC
CNCNNNCNNNNCCCCNNNNCCCCNCACNACCNCCTTCCCTCTCCCCCCNC
CCCCNNCCCNCCNNCCCCCNNCCCCNNNNNNCANNCNTAANNNNNNNNCN
CCNACTTTNNCCCTTNCCCCCNCNCCNNNTCCCCNNCCCACNNNNCACCN
NNNACCCCCCCNCCCTCCTNTCCCCCCACCCCACNCTCCCTTTATCNCCC
CACACACCANNCACAAATTNNACCACCNAAAAAAANCCACAACNCTTCAC
ACACCTTTANAAACNCCCCNCTACATCACCCCCCACCTCTTTTCCCCCCT
TTCCCGGTCTGCCGCTGGTGGTGTGTG

Query= MSMg01no527_h13.b1 MSMg01no527_h13.b1 CHROMAT_FILE:
MSMg01no527_h13.b1 PHD_FILE: MSMg01no527_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:43 2005
         (558 letters)



>mm_chr9_89859981_89860938
          Length = 958

 Score =  984 bits (509), Expect = 0.0
 Identities = 539/557 (96%), Gaps = 15/557 (2%)
 Strand = Plus / Plus

                                                                       
Query: 2   cttcctcacctgcactctgtgaagggagcctggcacatctatatatagcatggaagtcca 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cttcctcacctgcactctgtgaagggagcctggcacatctatatatagcatggaagtcca 261

                                                                       
Query: 62  ctgctgagatctaatgctaaggaaaagctccttccaaaatagtgccagtgactgacagtg 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgctgagatctaatgctaaggaaaagctccttccaaaatagtgccagtgactgacagtg 321

                                                                       
Query: 122 cccctggtcactccagagcttagatagagacatacaaagcaaatgcttatctcctgcctg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccctggtcactccagagcttagatagagacatacaaagcaaatgcttatctcctgcctg 381

                                                                       
Query: 182 ctaacatgacatctggtctacagctggggccctcgaggaagactcgaggaagactatcaa 241
           ||||||||||||||||||||||||||||||           |||||||||||||||||||
Sbjct: 382 ctaacatgacatctggtctacagctggggc-----------actcgaggaagactatcaa 430

                                                                       
Query: 242 ctttcaaatctgattatctaagtaatagacttttttttttttttttgagacggggtttct 301
           |||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||
Sbjct: 431 ctttcaaatctgattatctaagtaatagacttttttttttttt---gagacagggtttct 487

                                                                       
Query: 302 ctgtatagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactcaga 361
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactcaga 547

                                                                       
Query: 362 aatccgcctgcctctgcctcccgagtgctgggattaaaggcgtgcgacaccacgcccggc 421
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 548 aatccgcctgcctctgcctcccgagtgctgggattaaaggcgtgcgacaccatgcccggc 607

                                                                       
Query: 422 tcagtaatagacttttgtaaggctgccacaggtaaggtttttttctaaaggatctggtca 481
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 608 tcagtaatagacttttgtaaggctgccacaggtaaggtttttt-ctaaaggatctggtca 666

                                                                       
Query: 482 gagttcattcaagagcttctggagaacacacacccattgtagatgtctgaaagaacatct 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gagttcattcaagagcttctggagaacacacacccattgtagatgtctgaaagaacatct 726

                            
Query: 542 gtgattcaggggaaaga 558
           |||||||||||||||||
Sbjct: 727 gtgattcaggggaaaga 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)