NAACTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTCCATATCCTGGGAGACACTAGTAGCTACATCTTGTCTTCAC
GCTATCCATCCAAAAAGGACCCTCTCTCTCACCTCTTTTCTTCCCCTATC
CTACCAGGAAGACCTTCCTCTTCACCCAGTGATTGGCTCCTTTATTCATT
AGGGGATTGGTTCACAAGAAGTCACCTGAGTACATGACTCATTCTTTGTC
TGCAGCCCCTCTCAGGAGAGCAGAATTAGCATTAAAATCCAAACAGCATC
AGGCCCATCCACAACACTTCCCCCTTTCTGTTCTAATAAAAAAACAAAAC
TTTTCTCTCAAATATAAATAGAGCACAACTATTACCATTTTGTAATTTAT
AAAGTATAAGATAGTCCTAATACCCAGCCCATCAGTTATGTCATTAAGGT
AGAACATTGTCATCTACCCTAAATTAAAAGACTTATGATTCTTCCTTGAC
TTATGGCCTGGCTTTAGATTATATGCCATATTATAAACCATCCTCTCAAA
TCTCTTCTTTCAAAGTAAATAGCCTTGGTTGGCTATGACACTATAAGTAG
TTTTTTAACCCCATCAAGGAATGGGTGGGTAGGGGTGTTGTGGGGGGNTT
TTTNNTNNNNAATTATTATAAANTAAAAAAATTTTGTTTTTTTTGATATG
TTAAATATGTTTTTTTTTTTTCTTTGTTATTTTTTTTTTTTTTTATTGTG
TGCTT

NAACGATGATGTTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATATAAATTCTTTATAAGGATCC
ACTTGAAATAACTCAAAAGCTTCCAGAAGGAAAAAAAAAAAAGAACATTT
TCTTACTGTGTTTTTTAAAGTGAAAACCACACTTCTCAAGCATATCTGAG
AAATTACCTAAGCAGGATGATGGACATGCAGTGTCTTAAATAGGAACTGA
GCCTTTTGTAAGTGCTTGCTCCACTGCAATAGTTCCCAATGGATCTGAGT
TTCTTGTGCTGATCTGTGGTGCAGAGAGCTCTCTAGAAACTAGCTGTGGT
CGGTTGGAGGACAGAGTGGGGAACCAAGTCCTTGAAGGAGAAGGAACTAA
GAGTGAAGGGGAAGAAAACAGCATCTGACACGCCCCACCCCCTCCAATGA
TTTGATCTCTGGAAGGGATGCACCTGGTAACAAGAGTAAGCACTGGATAG
GACCTGTTTACAGCTTTGGTGATGTGGCTGTCTCTAGAAGAGAAGACTGT
CCTTGATTTCAGTGTCTTTAATACTCTTTCAGGTTTCTCAATATTTCACA
TGCAGCCCTGATGAAATTCAAATAGTTAAAACATTTAGATTAGCAGTCTT
TGCTGACCACATATTAATGTGTCCAGTTGGAACTCTTACCTCAGAAAGGT
TACTGAGCTTCAGGTATGTGGGAAGGTGGATCGTGAAAGGTAGACTGATC
CTCGGN

Query= MSMg01no528_g14.g1 MSMg01no528_g14.g1 CHROMAT_FILE:
MSMg01no528_g14.g1 PHD_FILE: MSMg01no528_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:00 2005
         (630 letters)



>mm_chr9_24742926_24743958
          Length = 1033

 Score = 1127 bits (583), Expect = 0.0
 Identities = 620/633 (97%), Gaps = 3/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atataaattctttataaggatccacttgaaataactcaaaagcttccagaaggaaaaaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 atataaattctttataaggatccacttgaaataactcaaaagcttccagaagaaaaaaaa 260

                                                                       
Query: 61  aaaaa--gaacattttcttactgtgttttttaaagtgaaaaccacacttctcaagcatat 118
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaagaacattttcttactgtgttttttaaagtgaaaaccacacttctcaagcatat 320

                                                                       
Query: 119 ctgagaaattacctaagcaggatgatggacatgcagtgtcttaaataggaactgagcctt 178
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaagaaattacctaagcaggatgatggacatgcagtgtcttaaataggaactgagcctt 380

                                                                       
Query: 179 ttgtaagtgcttgctccactgcaatagttcccaatggatctgagtttcttgtgctgatct 238
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 ttgtaagtgcttgctccacttcaatagtttccaatggatctgagtttcttgtgctgatct 440

                                                                       
Query: 239 gtggtgcagagagctctctagaaactagctgtggtcggttggaggacagagtggggaacc 298
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| 
Sbjct: 441 gtggtgcagagagctctctagaaactagctgtggtcggttggaggagagagtggggaaca 500

                                                                       
Query: 299 aagtccttgaaggagaaggaactaagagtgaaggggaagaaaacagcatctgacacgccc 358
           ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 501 aagtccttggaggagaaggaactaagagtgaaggggaagaaaacagcatctggcactccc 560

                                                                       
Query: 359 caccccctccaatgatttgatctctggaagggatgcacctggtaacaagagtaagcactg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccccctccaatgatttgatctctggaagggatgcacctggtaacaagagtaagcactg 620

                                                                       
Query: 419 gataggacctgtttacagctttggtgatgtggctgtctctagaagagaagactgtccttg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gataggacctgtttacagctttggtgatgtggctgtctctagaagagaagactgtccttg 680

                                                                       
Query: 479 atttcagtgtctttaatactctttcaggtt-tctcaatatttcacatgcagccctgatga 537
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 681 atttcagtgtctttaatactctttcaggttctctcaatatttcacatgcagccctgatga 740

                                                                       
Query: 538 aattcaaatagttaaaacatttagattagcagtctttgctgaccacatattaatgtgtcc 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 741 aattcaaatagttaaaacatttagattagcagtctttgctgaccacatattaacgtgtcc 800

                                            
Query: 598 agttggaactcttacctcagaaaggttactgag 630
           |||||||||||||||||||||||||||||||||
Sbjct: 801 agttggaactcttacctcagaaaggttactgag 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1033
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1023
Effective search space:   634260
Effective search space used:   634260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)