NNNNNCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCTGATCTTTCCAAGACTTTTATCATGAATGGGTGTT
GAATTTTGTCAAATGCTTTCTCTGCGTCTAAGGAGATGATCATGTGGTTT
TTGTCTTTGAGTTTGTTTATATAGTGAATTACGTTGATAGATTTCTGTAT
ATTAAACCATCCCTGCATCCCTGGAATGAAACCTACTTGGTCAGGATGGA
TTATTGTTTTGATGTGTTCTTGGTTTCGGTTTGCGAGAATTTTATTGAGT
ATTTTTGCATCAATATTCATATGGGAAATTGGTCTGAAGTTCTCTATTTT
TCTTGAGTCTTTCTGTGGTTTAGGCATCAGAGTAATTGTGGCTTCATAGA
ATGAATTGGGTAGAGTACCTTCTGCTTGTATTTTGTGGAATAGTTTGTGC
AGAACTGGAATTAGATCTTTGAAGGTCTAATAGAACTCTGCACTAAATCC
ATCTGGTCTTGGGCTGTTTTTGCTTGAGAGACTATTAATGACTACTTCTA
TTTTCTTTAGGGGATATAGGACTGTTTAGATCATTAACCTGATCCTGATT
TAACTTTGGTACCTGGTATCTGTCTAGGAATTTGTCCATTTCATCCAGGT
TTTCCAGTTTTGTTGAGTATAGCCTTCTGTAGAAGGATCTGATGGTGTTT
TGGATTTCTTCAGGATCTGTTGTTATGGCTCCN

TTTATACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACAGCAGACTAAAGTGT
AAGGCTCAAGATCTCTTAAAGCTTTCAAGTATTATCAGTTGTATTCCATT
GGACTACTGATAAACATTGAAACCAGGCTCTAGGAAGGATTTGGAAAGAA
TGCAGACATCACATCTGGTTATGTGGAATGAAACAGAAATAGGCTTTACT
TGCAAGGACAGCACAGGCTAGCACCAAAGAAAGACTTAAGAAAACAGATG
TATTTCCATTGGACAAAAAAACTTCATTTCTTTATTGTGCATGAACCATC
CTTGTAATGAAAATGCATATATTAATGGGCATTGTTGTTGTAAAAAGTTT
ATACAAAGAAGCAGAACAATACACAGATACATAACAATGCCCTAATAAAA
ATAACATGAGAAATTCTGTATATTTCTGGGTGATAAGATTATAGTAGAAT
ATTTTTAGACATTTGGAATTTTCTAGTTTTTTCACCAAAACTCTCCAAAA
GGCTATTCCTATTAGTCTCTACTATCAATAAAGAACTTTATTCAAATAAA
TAATATAACACTTGAAATAGTGTTTTTCCTAAATGCTCAAAACCATCTAA
CACATTTCCTAATGTGTTTTTTTTTCAAACTATACTCAAAATACGCTCAA
ACTCTCAAGACCATCCAACACATTTCCTAATGTGTTTCTTTTCA

Query= MSMg01no528_k07.g1 MSMg01no528_k07.g1 CHROMAT_FILE:
MSMg01no528_k07.g1 PHD_FILE: MSMg01no528_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:18 2005
         (663 letters)



>mm_chr9_84342000_84343064
          Length = 1065

 Score = 1270 bits (657), Expect = 0.0
 Identities = 663/665 (99%), Gaps = 2/665 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacagcagactaaagtgtaaggctcaagatctcttaaagctttcaagtattatcagttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tcacagcagactaaagtgtaaggctcaagatctcttaaagctttcaagtattatcagttg 806

                                                                       
Query: 61  tattccattggactactgataaacattgaaaccaggctctaggaaggatttggaaagaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tattccattggactactgataaacattgaaaccaggctctaggaaggatttggaaagaat 746

                                                                       
Query: 121 gcagacatcacatctggttatgtggaatgaaacagaaataggctttacttgcaaggacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gcagacatcacatctggttatgtggaatgaaacagaaataggctttacttgcaaggacag 686

                                                                       
Query: 181 cacaggctagcaccaaagaaagacttaagaaaacagatgtatttccattggac-aaaaaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 685 cacaggctagcaccaaagaaagacttaagaaaacagatgtatttccattggacaaaaaaa 626

                                                                       
Query: 240 acttcatttctttattgtgcatgaaccatccttgtaatgaaaatgcatatattaatgggc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acttcatttctttattgtgcatgaaccatccttgtaatgaaaatgcatatattaatgggc 566

                                                                       
Query: 300 attgttgttgtaaaaagtttatacaaagaagcagaacaatacacagatacataacaatgc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attgttgttgtaaaaagtttatacaaagaagcagaacaatacacagatacataacaatgc 506

                                                                       
Query: 360 cctaataaaaataacatgagaaattctgtatatttctgggtgataagattatagtagaat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctaataaaaataacatgagaaattctgtatatttctgggtgataagattatagtagaat 446

                                                                       
Query: 420 atttttagacatttggaattttctagttttttcaccaaaactctccaaaaggctattcct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttttagacatttggaattttctagttttttcaccaaaactctccaaaaggctattcct 386

                                                                       
Query: 480 attagtctctactatcaataaagaactttattcaaataaataatataacacttgaaatag 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attagtctctactatcaataaagaactttattcaaataaataatataacacttgaaatag 326

                                                                       
Query: 540 tgtttttcctaaatgctcaaaaccatctaacacatttcctaatgtg-tttttttttcaaa 598
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 325 tgtttttcctaaatgctcaaaaccatctaacacatttcctaatgtgttttttttttcaaa 266

                                                                       
Query: 599 ctatactcaaaatacgctcaaactctcaagaccatccaacacatttcctaatgtgtttct 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatactcaaaatacgctcaaactctcaagaccatccaacacatttcctaatgtgtttct 206

                
Query: 659 tttca 663
           |||||
Sbjct: 205 tttca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1065
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1055
Effective search space:   688915
Effective search space used:   688915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)