Query= MSMg01no529_g05.b1 MSMg01no529_g05.b1 CHROMAT_FILE:
MSMg01no529_g05.b1 PHD_FILE: MSMg01no529_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:19 2005
(640 letters)
>mm_chr9_124043344_124044384
Length = 1041
Score = 1087 bits (562), Expect = 0.0
Identities = 619/638 (97%), Gaps = 1/638 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctaagagttacaaacacaggtacatgtgagttgattaaagagaattgtttggt 63
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 841 ggaattcctaagagttagaaacacaggtacatgtgggttgattaaagagagttgttcagt 782
Query: 64 gtagaattgtagtgagacttagtgtaaacttcccgtgtcatttcaaagtgtagctaagat 123
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 781 gtagaattgtagtgagacttggtgtcaacttcccgtgtcatttcaaagtgtagctaagat 722
Query: 124 taagccaggactagaatatagccttcattaattgtaaactcatctcctgaatttatctag 183
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaagccaggactagaatgtagccttcattaattgtaaactcatctcctgaatttatctag 662
Query: 184 gcatgattgtaagtggtatcagaccctctccccacccactcgttcaatggcttatcaccg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcatgattgtaagtggtatcagaccctctccccacccactcgttcaatggcttatcaccg 602
Query: 244 actgcacactgagattggaaaaccctgtcaaaacttgctaattcgtgagtcctctgaaac 303
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 601 actgcacactgagattggaaaacactgtcaaaacttgctaattcttgagtcctctgaaac 542
Query: 304 cctctttgagagtgtggagtagactctgctgttcacct-cagagagaggcacctgcactg 362
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||
Sbjct: 541 cctctttgagagtgtggagtagactctgcttttcacctacagagagaggcacctggactg 482
Query: 363 agtgatcctcaacagcttttccattttaaaggtgtatagttttgtgagaatgtttcatcc 422
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 agtgatcctcaacagcttttccattttaaaggtgtatagttttgtaagaatgtttcatcc 422
Query: 423 atgtggatggaataataatggtaatgaagaaaagagaataaaaagaatcaaagaaagcca 482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgtggatggaataataatggtaatgaagaaaagagaataaaaagaatcaaagaaagcca 362
Query: 483 cctgcatttcaactatattggaacactgcaaacacttgggatatgcagggctagagtgaa 542
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 cctgcctttcaactatattggaacactgcaaacacttgggatatgcagggttagagtgaa 302
Query: 543 atgcaaggagagtctggggcacttcatgcatgtgaaaatacctgtttataaataatttcc 602
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 atgcaaggagagtctggggcacttcatgcatgtgaaaatacctgtttataagtaatttcc 242
Query: 603 cgagccttttcaaggtctgggctccagcattctgcaga 640
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgagccttttcaaggtctgggctccagcattctgcaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_g05.g1 MSMg01no529_g05.g1 CHROMAT_FILE:
MSMg01no529_g05.g1 PHD_FILE: MSMg01no529_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:19 2005
(638 letters)
>mm_chr9_123850081_123851118
Length = 1038
Score = 1176 bits (608), Expect = 0.0
Identities = 626/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 ttctgttagcccactgacttgtccttaaatattcgtaaaagctaaagaggctttttttgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 202 ttctgttagcccactgacttgtccttaaatattcgtaaaagctaa-gaggctttttttgc 260
Query: 61 catctggtatgctttcagggtttgggagtcattatctttgaaaggtaaacccataaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctggtatgctttcagggtttgggagtcattatctttgaaaggtaaacccataaggag 320
Query: 121 gtaggtccgaatcaccctgtgaccatgggaatttagcctaggtctcttgttcccggctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaggtccgaatcaccctgtgaccatgggaatttagcctaggtctcttgttcccggctgt 380
Query: 181 caaagatggaaatgatgctgtgctggctctgagcacagaggcaagcatcatgcctctgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaagatggaaatgatgctgtgctggctctgagcacagaggcaagcatcatgcctctgta 440
Query: 241 ttcttggaatctaacagccaccttgtcgataaggtcaaataagcctgtaagatggtaact 300
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 441 ttcttggaatctaacagccaccttgtcgacaaggtcaaataagcctgcaagatggtaact 500
Query: 301 aagatgtctattgccccaccaatagtcagcctcacttaacctgagactagatggtgtttc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 aagatgtctattgccccaccaatagtcagcctcacttaacctgagactagatggtgcttc 560
Query: 361 atgagtggattcagcgaaagaccacagaactgcttgcccagttaagcttggctcacatga 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgagtgggttcagcgaaagaccacagaactgcttgcccagttaagcttggctcacatga 620
Query: 421 tgaactttataactgttaatgataataattaattgggctttaaaccattagctttaagtt 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tgaactttataactgttaatgataataattaattgagctttaaaccattagctttaagtt 680
Query: 481 ggcttattaggcaatgatttgaagctatgtcttgttaaagagcacccttcctgtcttgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggcttattaggcaatgatttgaagctatgtcttgttaaagagcacccttcctgtcttgag 740
Query: 541 atcatagagggtcatctatatcctcacactttcaccattttgccttcatgtttaaatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atcatagagggtcatctatatcctcacactttcaccattttgccttcatgtttaaatata 800
Query: 601 tagtcaatctgaaattaatgtgtattacaaat 632
||||||||||||||||||||||||||||||||
Sbjct: 801 tagtcaatctgaaattaatgtgtattacaaat 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
