Query= MSMg01no529_p10.b1 MSMg01no529_p10.b1 CHROMAT_FILE:
MSMg01no529_p10.b1 PHD_FILE: MSMg01no529_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:07 2005
(665 letters)
>mm_chr9_45496802_45497866
Length = 1065
Score = 1266 bits (655), Expect = 0.0
Identities = 658/659 (99%)
Strand = Plus / Plus
Query: 7 gaattcttcagcgagaggcaggtacagagccaagctgctcttcagggtggaagggataag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcttcagcgagaggcaggtacagagccaagctgctcttcagggtggaagggataag 266
Query: 67 ctgtgttttgatgtcaccatcacatggcaggccccccccccaagaactcctggcccccat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctgtgttttgatgtcaccatcacatggcaggccccccccccaagaactcctggcccccat 326
Query: 127 ctttattagacaggtactcttcctgcccctggctcccctccacctctctgaaggctccag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctttattagacaggtactcttcctgcccctggctcccctccacctctctgaaggctccag 386
Query: 187 tgcctgggccacagacaaagctcatggccaattaaacccagaagggttctttgtttgctc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgcctgggccacagacaaagctcatggccaattaaacccagaagggttctttgtttgctc 446
Query: 247 tgagttttggtttgtttgtttagcaaaatgtcaggccaattaaagtgagctccaagggcc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgagttttggtttgtttgtttagcaaaatgtcaggccaattaaagtgagctccaagggcc 506
Query: 307 ctcagcttccacacacctgcatcacaggaagtcggatggaaggaagtagaccctaataga 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctcagcttccacacacctgcatcacaggaagtcggatggaaggaagtagaccctaataga 566
Query: 367 caggtgggctgatggagggagccagcctgacccaaggaaacctttgaccagcttagctac 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caggtgggctgatggagggagccagcctgacccaaggaaacctttgaccagcttagctac 626
Query: 427 tgtagctgactgctggtctcaaggtcaaggtacaaaccccttggaagcacagtcagctct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtagctgactgctggtctcaaggtcaaggtacaaaccccttggaagcacagtcagctct 686
Query: 487 gtatcccacgtcagtcccataacccatgtcagtccccattcacatgaaaaatcagacaga 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtatcccacgtcagtcccataacccatgtcagtccccattcacatgaaaaatcagacaga 746
Query: 547 agaggtgtgaccactgacctggtggtgggactgctgccctcccacaaggacaggagtcaa 606
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 agaggtgtgtccactgacctggtggtgggactgctgccctcccacaaggacaggagtcaa 806
Query: 607 tgaatcaaaggaacagccacccagagactacaaacccctgtccagaccatacgtctggg 665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tgaatcaaaggaacagccacccagagactacaaacccctgtccagaccatacgtctggg 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_p10.g1 MSMg01no529_p10.g1 CHROMAT_FILE:
MSMg01no529_p10.g1 PHD_FILE: MSMg01no529_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:07 2005
(309 letters)
>mm_chr9_45632604_45633311
Length = 708
Score = 559 bits (289), Expect = e-164
Identities = 301/305 (98%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 1 ttttttctttcttcttcttttttaaacttttcttacttggaggggcatggtgggaatgag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 504 ttttttctttcttcttcttttttaaacttttcttacttggaggggcgtggtgggaatgag 445
Query: 61 aggggcagagtctggttttcttggaggtctggtggactgaaggtggtctgagtgtcatga 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 444 aggggcagagtctggttttcttggaggtctggtggactgaaagtggtctgagtgtcatga 385
Query: 121 tcacagaaggccacaggaacaggtcttgataggttccctgttgcttctcggaggtccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacagaaggccacaggaacaggtcttgataggttccctgttgcttctcggaggtccctc 325
Query: 181 tgtatggatctgggctagggtcctggtcaccagcctcagccgttactgaacgctccgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtatggatctgggctagggtcctggtcaccagcctcagccgttactgaacgctccgctg 265
Query: 241 caggtctggtcagacttggcctttatgatgggcagtggggtgtgtgtgtgtgtggggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 264 caggtctggtcagacttggcctttatgatgggcagtggggtgtgtgtgtgtgt-gggggg 206
Query: 301 tggtg 305
||||
Sbjct: 205 gggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 708
Length adjustment: 9
Effective length of query: 300
Effective length of database: 699
Effective search space: 209700
Effective search space used: 209700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
