ATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTGCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGGAGTCTACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCC
CTATCCGATTTGGGATAGGTAAAGATCCTGTGGAGAGCCGTGCCACAAGC
AATCGCGTGTGTGCGGTGAGCAATTGCCATTATAAGATGGCGCTGGCTTC
CACTGGGCCTAACTAGTAAACAAGCCTTATGCGCAAGTGCAAGAGTGAAC
TCACGCCTAGTCACTGCCCATCTCGCGGCGCAGTAATGGGGTGATGGGCG
AGCAATGAATCAGGAGCTGTCACGCCACATCAGGTGCTGAAATGTCACGC
TGTGGGCTATATAAGCAGCGCCATTTTCCCGGTTCGGGATCTTCCTCCTG
AGAAGTAAGCAATAAAGCTTTTTGCCTCAGAAGTTTCCGGTTGTCCTGAG
TGTGTTCTTGCAGGCGGGGACAAAAGCTCGGGCAATAAAATCCTTTCCCA
ATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGG
GGCTTTGCAATTTTATGAGGTCCCATTTATCGATTTTCGATCTTATAGCA
CAAGCCATTGCTGATCTATTCAGGAATTTTCCCGCTGTACTTCTTCGAGG
CTTTTCCCTACTTTCTCCTCTTTTCAGTGTTTCTGGTTTTATGTGGAGAT
AGAAATGGATCGATTCACAATCTTC

NCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATCGAGGAAATAGACCAGGCTTGTCCT
CCGATATCTTTCTTGGGAGGTTTGCTAGAGGACGGAATAGCTCTGGGTCT
AACCTAGAGTCTGTGTTTCAGGCAACGAGTTGGGCTTCTTGAGTTTTGTA
TAACTGCCCTGTACCCAAGACTTAAATGCTGAAGTTGAACCTCCCTCCAC
ATCCTCCTCCAGGCTTCAAGATGTTGAGGAACATTAAGCTGGTGACAGAA
GAAAGCTGGAGACAAGGCTAGGTCCCTGCTTTGTACAGGTTAGGGATATC
CAAAAAAGAATGCTCAAAATACTTCCCACCCCCATACACACATACCCCAA
AGGGACAGAACACTAGAGAAGTTCTTTGCTTTTGGTCTTTAGGGGATTTT
TAGAGCAAATACAAACAAAAATGAAAGTGGCTCAAAAATAAGTGGTAATA
TTCTCCTAGGAATTACAAATGTGACCAGAGACGGAAGAGAGAAAATGGAT
AGAGTTCCCAAACTTGGATTTATCTGTCTCCTCCCATCTTGGACCATATC
TGGCATTCTCTCTAACTCCCATGCCTCGCTTGAAACACTAAATGGTTGGA
AGACCAGCAGAGGTGTGTAAAACCTTGTTCATCTGCCATGACATCATTTA
GGGGCTGCTTCTACTGGACCCTTCGCAGAGGTGTAGTGCTCTGTGTGGTT
TGTGTGCGGGGGGGCAATGTGGGTAGCCTTGG

Query= MSMg01no530_j08.g1 MSMg01no530_j08.g1 CHROMAT_FILE:
MSMg01no530_j08.g1 PHD_FILE: MSMg01no530_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:57 2005
         (583 letters)



>mm_chr9_32746988_32747971
          Length = 984

 Score = 1091 bits (564), Expect = 0.0
 Identities = 576/580 (99%), Gaps = 1/580 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   aggaaatagaccaggcttgtcctccgatatctttcttgggaggtttgctagaggacggaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aggaaatagaccaggcttgtcctccgatatctttcttgggaggtttgctagaggacggaa 264

                                                                       
Query: 65  tagctctgggtctaacctagagtctgtgtttcaggcaacgagttgggcttcttgagtttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagctctgggtctaacctagagtctgtgtttcaggcaacgagttgggcttcttgagtttt 324

                                                                       
Query: 125 gtataactgccctgtacccaagacttaaatgctgaagttgaacctccctccacatcctcc 184
           || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 gtgtaactgccctgtacccaagacttaaatgctaaagttgaacctccctccacatcctcc 384

                                                                       
Query: 185 tccaggcttcaagatgttgaggaacattaagctggtgacagaagaaagctggagacaagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccaggcttcaagatgttgaggaacattaagctggtgacagaagaaagctggagacaagg 444

                                                                       
Query: 245 ctaggtccctgctttgtacaggttagggatatccaaaaaagaatgctcaaaatacttccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaggtccctgctttgtacaggttagggatatccaaaaaagaatgctcaaaatacttccc 504

                                                                       
Query: 305 acccccatacacacataccccaaagggacagaacactagagaagttctttgcttttggtc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acccccatacacacataccccaaagggacagaacactagagaagttctttgcttttggtc 564

                                                                       
Query: 365 tttaggggattttt-agagcaaatacaaacaaaaatgaaagtggctcaaaaataagtggt 423
           || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaaggggattttttagagcaaatacaaacaaaaatgaaagtggctcaaaaataagtggt 624

                                                                       
Query: 424 aatattctcctaggaattacaaatgtgaccagagacggaagagagaaaatggatagagtt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatattctcctaggaattacaaatgtgaccagagacggaagagagaaaatggatagagtt 684

                                                                       
Query: 484 cccaaacttggatttatctgtctcctcccatcttggaccatatctggcattctctctaac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccaaacttggatttatctgtctcctcccatcttggaccatatctggcattctctctaac 744

                                                   
Query: 544 tcccatgcctcgcttgaaacactaaatggttggaagacca 583
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcccatgcctcgcttgaaacactaaatggttggaagacca 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 984
Length adjustment: 10
Effective length of query: 573
Effective length of database: 974
Effective search space:   558102
Effective search space used:   558102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)