Query= MSMg01no531_a08.b1 MSMg01no531_a08.b1 CHROMAT_FILE:
MSMg01no531_a08.b1 PHD_FILE: MSMg01no531_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:32 2005
(550 letters)
>mm_chr9_54647996_54648945
Length = 950
Score = 953 bits (493), Expect = 0.0
Identities = 529/541 (97%), Gaps = 2/541 (0%)
Strand = Plus / Plus
Query: 11 gaattctgtgctttttgagtagagacctcgagtgttcttctccccgcccactggcctctc 70
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gaattctgtgctaaatgagtagagacctcgagtgttcttctccccgcccactggcctctc 270
Query: 71 ttctcttctctttttaaaattccccacagctttgttcctggctttgctccgggaactgct 130
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 271 ttctcttctctttttaaaattccccacagctttgttcctggcttttctccgggaactgct 330
Query: 131 tctcatatgtgagcatgcctgaagatcacctggggatcttgttaaaatgaatctgattcc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tctcatatgtgagcatgcctgaagatcacctggggatcttgttaaaatgaatctgattcc 390
Query: 191 atgggcctggactgaagcaccatcctagcaagcagctggctgatgctggcgctggctgct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 atgggcctggactgaagcaccatcctagcaagcagctggctgatgctggcgctggctgct 450
Query: 251 ggtggaccacactcagatggctgctggtggaccacactcagatggctgatcgtggactg- 309
||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||| |
Sbjct: 451 ggtggaccacactcaaatggctgctggtggaccacactcaaatggctgctggtgga-tca 509
Query: 310 cactcagaataccatgaggctagaaacacatcatcaagtatggtagccaccaagtgtatg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 cactcagaataccatgaggctagaaacacatcatcaagtatggtagccaccaagtgtatg 569
Query: 370 taactgaagtccagggaaattgcaaatgcaattcatttctcactggcactagccacatgt 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 taactgaagtccagggaaattgcaaatgcaattcatttctcactggcactagccacatgt 629
Query: 430 tgagtgctccacagccctacgtggctatggagaggctaatgctgctccctccacagaacg 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tgagtgctccacagccctacgtggctatggagaggctaatgctgctccctccacagaacg 689
Query: 490 gcgacgttgttggaactacagccctaaggtgatgtgttaactatccctgtcatggggctg 549
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gcgaggttgttggaactacagccctaaggtgatgtgttaactatccctgtcatggggctg 749
Query: 550 t 550
|
Sbjct: 750 t 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_a08.g1 MSMg01no531_a08.g1 CHROMAT_FILE:
MSMg01no531_a08.g1 PHD_FILE: MSMg01no531_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:32 2005
(419 letters)
>mm_chr9_54823624_54824442
Length = 819
Score = 801 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Minus
Query: 1 agaggacaacttagggaagtcagtcctctctttccaatacatgggtcccagggatcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 agaggacaacttagggaagtcagtcctctctttccaatacatgggtcccagggatcaaac 759
Query: 61 ttatacttttattagattgcaatagctgtattcatgtttaactaaacacgatctatacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ttatacttttattagattgcaatagctgtattcatgtttaactaaacacgatctatacat 699
Query: 121 atgtaatatattcatataataaatatacatttaaattaagtaacttcatttaaatataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 atgtaatatattcatataataaatatacatttaaattaagtaacttcatttaaatataca 639
Query: 181 tttacatataaaccatacatgaaactcagctatcctaatagaataatcacatagtgcaac 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 638 tttacatataaaccatacatgaaactaagctatcctaatagaataatcacatagtgcaac 579
Query: 241 atgccagagatttgactgctagtagaagaacaacagttaacaagcaaattataattcact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atgccagagatttgactgctagtagaagaacaacagttaacaagcaaattataattcact 519
Query: 301 tataaaatagaaaattataatgtatccagaacaaacatcagctcttatttaaaatgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tataaaatagaaaattataatgtatccagaacaaacatcagctcttatttaaaatgaaga 459
Query: 361 cactggggtagggggatggtgaagtgggtaaagtatctactgtgtaagtttgaggaac 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cactggggtagggggatggtgaagtgggtaaagtatctactgtgtaagtttgaggaac 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
