Query= MSMg01no531_m06.b1 MSMg01no531_m06.b1 CHROMAT_FILE:
MSMg01no531_m06.b1 PHD_FILE: MSMg01no531_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:30 2005
(491 letters)
>mm_chr9_71404997_71405887
Length = 891
Score = 934 bits (483), Expect = 0.0
Identities = 489/491 (99%)
Strand = Plus / Minus
Query: 1 agtatttttttttaaagacaaatttttctcatgtaccatttagctgacaatctaggcatt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 510 agtatttttttttaaagacaaattcttctcatgtaccatttagctgacaatctaggcatt 451
Query: 61 tacctaccttaggtttcttattagagcagtgttagccctaacccacggactcatagtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tacctaccttaggtttcttattagagcagtgttagccctaacccacggactcatagtctc 391
Query: 121 ttagttccaagctacaaaaaaacagggccatgcaactagaagattaaccattggccatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttagttccaagctacaaaaaaacagggccatgcaactagaagattaaccattggccatat 331
Query: 181 ctgaaggtcattggctgaaggtcagtggtgcaagaaagatcacagcctctgccacccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgaaggtcattggctgaaggtcagtggtgcaagaaagatcacagcctctgccacccttc 271
Query: 241 ccttctacttgattgttattatcaacagagaccagactcttggctttatttcttagaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccttctacttgattgttattatcaacagagaccagactcttggctttatttcttagaaac 211
Query: 301 acagagctagacagactgtgggtaaactgagaccagcagagatcaatgacctgatattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 acagagctagacagactgtgggtaaactgagaccagcagagatcaatgacctgatattaa 151
Query: 361 gtgtctagctagtggcagagacaggattagacgaatcttgtctcttggtctaggctaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gtgtctagctagtggcagagacaggattagacgaatcttgtctcttggtctaggctaagt 91
Query: 421 gtttgtgtgtccattttctcccagaaggacttgggcgttgggctagatgtcttctgaagt 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 gtttgtgtgttcattttctcccagaaggacttgggcgttgggctagatgtcttctgaagt 31
Query: 481 tcctggaagct 491
|||||||||||
Sbjct: 30 tcctggaagct 20
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_m06.g1 MSMg01no531_m06.g1 CHROMAT_FILE:
MSMg01no531_m06.g1 PHD_FILE: MSMg01no531_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:30 2005
(492 letters)
>mm_chr9_71246845_71247737
Length = 893
Score = 884 bits (457), Expect = 0.0
Identities = 484/493 (98%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 1 ttcccaacgaaacagaacttccagagaacacagaagcctggggagatagtcctgggagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcccaacgaaacagaacttccagagaacacagaagcctggggagatagtcctgggagag 260
Query: 61 ggtggggcatacacaggcacggaagcaggcccttcccattaatgctaagaaaaggcaagt 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 ggtggggcatacacaggcacggaagcagatccttcccattaatgctaagaaaaggcaagt 320
Query: 121 tatcccactcaatctgtccttagatatctaaggatatcaggagcaagctacaaggtcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcccactcaatctgtccttagatatctaaggatatcaggagcaagctacaaggtcaga 380
Query: 181 atggtaccagatgttgacagaacttatctaccaggctaaggatactgacagttccagaga 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggtaccagatgttgacagaccttatctaccaggctaaggatactgacagttccagaga 440
Query: 241 agttgggaaacagtctaagtaatgatgctggcagtctcttgggagacaagaagagaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgggaaacagtctaagtaatgatgctggcagtctcttgggagacaagaagagaccaa 500
Query: 301 aagaggtctatttgcataatttaagcaagaagatctaaggagggaaaa-taggttttgag 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 aagaggtctatttgcataatttaagcaagaagatctaaggagggaaaaataggttttgag 560
Query: 360 tgtaagaaacggaaactgcagcttagtgaatttgtgctttattctatatgcagaagctct 419
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtaagaaaccgagactgcagcttagtgaatttgtgctttattctatatgcagaagctct 620
Query: 420 cgtttccatccagccccttcgtcctggccaccttttgacatcaaaggtccttggttgcaa 479
| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 catttccatccagcccctttgtcctggtcaccttttgacatcaaaggtccttggttgcaa 680
Query: 480 gccacagtcatgg 492
|||||||||||||
Sbjct: 681 gccacagtcatgg 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 893
Length adjustment: 10
Effective length of query: 482
Effective length of database: 883
Effective search space: 425606
Effective search space used: 425606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
