Query= MSMg01no531_n10.b1 MSMg01no531_n10.b1 CHROMAT_FILE:
MSMg01no531_n10.b1 PHD_FILE: MSMg01no531_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:36 2005
(626 letters)
>mm_chr9_117184267_117185292
Length = 1026
Score = 1174 bits (607), Expect = 0.0
Identities = 619/623 (99%)
Strand = Plus / Plus
Query: 4 ggaattcaaccccttctgtctttaagcactggtgacataaccctgtgaattctgcagcac 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaccccatctgtctttaagcactggtgacataaccctgtgaattctgcagcac 263
Query: 64 tataaaattggtgatttgtaaaatcctcattggcacagaaaactaaaccaacaaagagaa 123
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 tgtaaaattggtgatttgtaaaatccttattggcacagaaaactaaaccaacaaagagaa 323
Query: 124 aaacgatgagtgagattcactttctccataactcttagctttctttaccatcacggtaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaacgatgagtgagattcactttctccataactcttagctttctttaccatcacggtaat 383
Query: 184 gccttcttttagaagcagctcagaaaccaaggaaaaaccaccagccacaaaggagacaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccttcttttagaagcagctcagaaaccaaggaaaaaccaccagccacaaaggagacaat 443
Query: 244 aagtccagtcaggagagatttgggacctacctttaatccttaataatggttcagaaaacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagtccagtcaggagagatttgggacctacctttaatccttaataatggttcagaaaacc 503
Query: 304 atttctctcttgcttttattgtctctgacaagtccagcaaaggcacagaccgggcaacca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 504 atttctctcttgcttttattgtctctgacaagtccagcaaaggcacagaccgggcaagca 563
Query: 364 tttttatgctggcctcttcagatagctttgtataatttacattatttttaatttcagtaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttttatgctggcctcttcagatagctttgtataatttacattatttttaatttcagtaa 623
Query: 424 tagcaactagctggctaaggcaataagcactttttaacaatgaataaataaagaaatctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagcaactagctggctaaggcaataagcactttttaacaatgaataaataaagaaatctc 683
Query: 484 tcatatttcaattaagtaacggaacgaaatcgtaacgagcatggctgtttcattctattc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcatatttcaattaagtaacggaacgaaatcgtaacgagcatggctgtttcattctattc 743
Query: 544 ggctgttgctcagagaatgttcattaagagtgttgcattgttaatatttataatgtttgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggctgttgctcagagaatgttcattaagagtgttgcattgttaatatttataatgtttgc 803
Query: 604 attaatataattcatattatagt 626
|||||||||||||||||||||||
Sbjct: 804 attaatataattcatattatagt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_n10.g1 MSMg01no531_n10.g1 CHROMAT_FILE:
MSMg01no531_n10.g1 PHD_FILE: MSMg01no531_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:36 2005
(595 letters)
>mm_chr9_117349159_117350153
Length = 995
Score = 804 bits (416), Expect = 0.0
Identities = 434/440 (98%), Gaps = 2/440 (0%)
Strand = Plus / Minus
Query: 1 acttgat-gtgtcatctccaggcagtagccatgacctagttagtgaggtcatgagtctac 59
||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acttgatggt-tcttctccaggcagtagccatgacctagttagtgaggtcatgagtctac 381
Query: 60 atgacagggtcacaaattatttcttgataaattggaagcttaaaaatattaataaagagc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgacagggtcacaaattatttcttgataaattggaagcttaaaaatattaataaagagc 321
Query: 120 cccccaccactgatgatgtaagaaacatatttaactaatgttttaattacctgaaatgtc 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctcccaccactgatgatgtaagaaacatatttaactaatgttttaattacctgaaatgtc 261
Query: 180 tattgattcacaccagggtgaacttatcggggtaagtgtatggtttgggtcctttgtggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tattgattcacaccagggtgaacttatcggggtaagtgtatggtttgggtcctttgtggt 201
Query: 240 ttttctttgattttcagacaggttcttgctgtgtgtccctagctagcctggaatttgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttttctttgattttcagacaggttcttgctgtgtgtccctagctagcctggaatttgtga 141
Query: 300 tgttcctaccccactgtaccaagtgctgggactacaggtgtagtttggatcttatccatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tgttcctaccccactgtaccaagtgctgggactacaggtgtagtttggatcttatccatc 81
Query: 360 ccctaaaggcccatatgctaaattatggttgccagtctgtggagctcaggaagtgatggt 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 80 ccctaaaggcccatatgctaaagtatggttgccagtctgtggagctcaggaagtgatggt 21
Query: 420 atctttgagaggcatagcct 439
|||||||||||||| |||||
Sbjct: 20 atctttgagaggcagagcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
