NGGACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGACTTCATCTTGGAAGGTTTTACCTTTGATGGATATGAA
GTGCCTCTCCTTGTCTCTTTTTGTAACTTTGGGTTGGCAGTCAATTTTAT
TCCATATTAGAAAAGCTACTCCAGCTTGTTGCTTAGTACCATTTGCTTTG
AAAATTGTTTTCCAATCTTTTACCCTGAGGTAGTGTCTGTCTTCTTTCCT
AAGGTGGGTTTCCTGTAAGCTGCAAAAAGTTGGGTCCTGTTTATGTAGCC
AGTCTGTTAGTCTATGTCATTTTATACAGGAATTGAGTCCATTGATGTTA
AGAGATATTAAGGAAAAGTAATTGTTGCTTCCTGGGTTTTTGTTGTTGTT
GTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTGTTAG
AGTTGGGATTTATATNNGTTGNNNGTCTGNNTTCNTGGANAGATATTGTG
TGAATTTGATTTTGTCATGTAATAGTTTGGATTCTCTTTCTATGGAAATT
GAAAGGTTTGCTGGGTGAAGTAACTGGAATTTGTCTCCTCTTACCGTAAG
CAAAATATCTTCTCCGGATCATTCGGGCTTTTATAGTCCTCTGCCGAGAA
TTCAGGAGAACATTTTAAATAGCTCGCCTTTTATGTGTCACTTTGACCTT
TTCTTACTGTACTGCTTTTTATTACTATTAAGAGAACTGTGGTGAGACAT
GGGTCATTATGTGGTTAAGAAA

NNNCCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAATGTCAGGAAT
AAAATAATGATGCATGTTTGAAGTGCTTGACTGAAAAATATGGAGGCAGA
AGACAGAAACAAATTGGTCACAAATGTGGCTGTCCAAGCAAATGCCTTGA
TTTCTTTTGAGGATCTACACTCATTTACCAATCAGCATTCCTAATAAGTC
TGAAATACTTCACAGGTTGAATGTAAATTTGAAGAAAAACATAGGCGAAG
ATCGTAAGAGGCATGGAAAGCAATATTTCTTTTAAATTTTGATTTTAGAA
AATACTGAAATCTGTAATAAATATGGTTAAAACCACAAAATTTTACTGAA
GAAAAGATGAACTAAGCTATATTGGAAATGTATACAAGTCAGGAGGACTC
AAGAGGCTATACAAAAGATAAATCAAGCTAACCTGCAATCTAAATGTGCT
ATATTACAACAGAGTTGCATTTTCATGAGGGTAAAAATGGGATAGGTTTT
TGCTAAGACCATTAGTAAAGCAAAAGAAACACAATAAAGATACTGTTTTC
TTTATGCAATTTTGGGCAATGGGAGAAAAATAACTTTGTATCTTTGAGGG
AAATTATAGAAAACAATTAAGAAACATTAGAATAACTTATAAATTTTTTA
ACAGATTGCAAAACATTTTACATTATCCTAATCTTCCAGAGAAAGCAGCA
CTGGTGA

Query= MSMg01no532_b02.g1 MSMg01no532_b02.g1 CHROMAT_FILE:
MSMg01no532_b02.g1 PHD_FILE: MSMg01no532_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:54 2005
         (670 letters)



>mm_chr9_3670451_3671520
          Length = 1070

 Score = 1073 bits (555), Expect = 0.0
 Identities = 644/683 (94%), Gaps = 21/683 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    caatgtcaggaataaaataatgatgcatgtttgaagtgcttgactgaaaaatatggaggc 60
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1015 caatgtcaggaataaaataatgatgcatgtttgacgtgcttgactgaaaaatatggaggc 956

                                                                        
Query: 61   agaagacagaaacaaattggtcacaaatgtggctgtccaagcaaatgccttgatttcttt 120
            |||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 955  agaagacaaaaacaaattggtcacaaatgtggctggccaagcaaattccttgatttcttt 896

                                                                        
Query: 121  tgaggatctacactcattta-----ccaatcagc--attcctaataagtctgaaatactt 173
            |||| |||||||||||||||     |  || |||  |    |||||| ||||||||||||
Sbjct: 895  tgagaatctacactcatttagtattc--atgagctaa----taataactctgaaatactt 842

                                                                        
Query: 174  cacaggttgaatgtaaatttgaagaaaaacataggcgaagatcgtaagaggcatggaaag 233
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 841  cacaggttgaatgtaaatttgaagaaatacataggcgaagatcgtaagaggcatggaaag 782

                                                                        
Query: 234  caatatttcttttaaattttgattttagaaaatactgaaatctgtaataaatatggttaa 293
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  caatattt-ttttaaattttgattttagaaaatactgaaatctgtaataaatatggttaa 723

                                                                        
Query: 294  aaccacaaaattttactgaagaaaagatgaactaagctatattggaaatgtatacaagtc 353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722  aaccacaaaattttactgaagaaaagatgaactaagctatattggaaatgtatacaagtc 663

                                                                        
Query: 354  aggaggactcaagaggctatacaaaagataaatcaagctaacctgcaatctaaatgtgct 413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662  aggaggactcaagaggctatacaaaagataaatcaagctaacctgcaatctaaatgtgct 603

                                                                        
Query: 414  atattacaacagagttgcattttcatgagggtaaaaatgggataggtttttgctaagacc 473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602  atattacaacagagttgcattttcatgagggtaaaaatgggataggtttttgctaagacc 543

                                                                        
Query: 474  attagtaaagcaaaagaaacacaataaagatactgttttctttatgcaattttgggcaat 533
            |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 542  attagtaaagcaaaagaaacacaacaaagatactgttttctctatacaattttgggcaat 483

                                                                        
Query: 534  gggagaaaaataactttgtatctttgagggaaattatagaaaacaattaagaaacattag 593
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 482  gggagaaaaataactttgtatctttgagggaaattatagaaaacaattaaaaaacattag 423

                                                                        
Query: 594  aataacttataaat-tttttaacagattgcaaaacattttacattatcctaatcttccag 652
            |||| ||||||||  |||||||||||||  ||||||||||| |||||| |||||||||||
Sbjct: 422  aatatcttataaaaatttttaacagattataaaacattttaaattatcgtaatcttccag 363

                                   
Query: 653  agaaagca------gcactggtg 669
            ||||||||      |||||||||
Sbjct: 362  agaaagcaaacagagcactggtg 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)