Query= MSMg01no532_b11.b1 MSMg01no532_b11.b1 CHROMAT_FILE:
MSMg01no532_b11.b1 PHD_FILE: MSMg01no532_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:55 2005
(454 letters)
>mm_chr9_36952071_36952924
Length = 854
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Minus
Query: 4 ggaattcaaatgttcttcaactggtagaatccaagataacaagcttaaacggatttaaac 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ggaattcaaatgctcttcaactggtagaatccaagataacaagcttaaacggatttaaac 564
Query: 64 atccgcccccacacacacacccctcccaaatctcagaaatgatggtgttcaaaagcaaca 123
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atccgcccccccacacacccccctcccaaatctcagaaatgatggtgttcaaaagcaaca 504
Query: 124 tggttttatcccaaactctagcccctttgccctcccactctgccttctgaccttcccgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggttttatcccaaactctagcccctttgccctcccactctgccttctgaccttcccgtg 444
Query: 184 gcccctggaccttgatgcaaatgcacgcatgtgtgtatgcctgtaggtaggtgtggggtg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcccctggaccttgatgcaaatgcacgcatgtgtgtatgcctgtaggtaggtgtggggtg 384
Query: 244 tctcttatttaggggctcgtatctcatactcaaactacttcctcaaggctcgggcctagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tctcttatttaggggctcgtatctcatactcaaactacttcctcaaggctcgggcctagc 324
Query: 304 tcaccagtgggtggagtggaggggtcctaaagaaggaaagagcagattggggagaaggag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaccagtgggtggagtggaggggtcctaaagaaggaaagagcagattggggagaaggag 264
Query: 364 ggttgaagatgttacattctggacatttagataaagagtaaggttgagggatggatgtaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggttgaagatgttacattctggacatttagataaagagtaaggttgagggatggatgtaa 204
Query: 424 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 454
|||||||||||||||||||||||||||||||
Sbjct: 203 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_b11.g1 MSMg01no532_b11.g1 CHROMAT_FILE:
MSMg01no532_b11.g1 PHD_FILE: MSMg01no532_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:55 2005
(589 letters)
>mm_chr9_36756333_36757316
Length = 984
Score = 1065 bits (551), Expect = 0.0
Identities = 578/589 (98%), Gaps = 5/589 (0%)
Strand = Plus / Plus
Query: 1 accttggtttgttgagtgacagttggacttagcatgagatctcagggggtgggacacacc 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 accttggtttgttgagtgacagttggacttagtatgagatctcagggggtgggacacacc 260
Query: 61 agtgttgaggctctctgctgaatagttcatgggaactgggggactggtttaagtcttcgg 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgttgaggctctctgctgagtagttcatgggaactgggggactggtttaagtcttcgg 320
Query: 121 tgtgcagtatgcaaaaaaacaccaagaaaacaaagagtgggggaaagggtttaaagcagg 180
|||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tgtgcagtatgc-aaaaaacaccaagaaaac----agtgggggaaagggtttaaagcagg 375
Query: 181 gcttctggaattgccataaaggagttctctcactggtaagccggcaaaggctcctgaacc 240
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||
Sbjct: 376 gcttctggaattgccataaaggagttctctcactggtaagccagcaaaggttcctggacc 435
Query: 241 agggcggatgctgagagtgggcttgcgcaagcagagagaaacagtactgagtagaatccc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agggcggatgctgagagtgagcttgcgcaagcagagagaaacagtactgagtagaatccc 495
Query: 301 caaagcagaaaactcttggccttggcattcaggtgtggagcaccatggcgcttacacacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 caaagcagaaaactcttggccttggcattcaggtgtggagcaccatggcgcttacacacg 555
Query: 361 tatccagctcttactccaccctcagcactttctgaagtatttaagtcattaaagagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tatccagctcttactccaccctcagcactttctgaagtatttaagtcattaaagagagaa 615
Query: 421 catttcaagttaagatcccagagttagacccgaagggacagaccggggagaggatgagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 catttcaagttaagatcccagagttagacccgaagggacagaccggggagaggatgagca 675
Query: 481 aggccattgaaagctaatgaatctgcacacaggatcatctccctccctctatcagcaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aggccattgaaagctaatgaatctgcacacaggatcatctccctccctctatcagcaata 735
Query: 541 gagactgtgtgcctgtgacatggatcttcgaatttggattgtactgagt 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gagactgtgtgcctgtgacatggatcttcgaatttggattgtactgagt 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 984
Length adjustment: 10
Effective length of query: 579
Effective length of database: 974
Effective search space: 563946
Effective search space used: 563946
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
