Query= MSMg01no532_e07.b1 MSMg01no532_e07.b1 CHROMAT_FILE:
MSMg01no532_e07.b1 PHD_FILE: MSMg01no532_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:09 2005
(432 letters)
>mm_chr9_14942123_14942954
Length = 832
Score = 812 bits (420), Expect = 0.0
Identities = 429/432 (99%)
Strand = Plus / Minus
Query: 1 ggctactgcagacaacagccaagaaagcccagtctacctttggttgttttccagtagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggctactgcagacaacagccaagaaagcccagtctacctttggttgttttccagtagctc 573
Query: 61 tctgttgctgttgctccccaactgcagagccttgtgagttttgagggtttgagataacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tctgttgctgttgctccccaactgcagagccttgtgagttttgagggtttgagataacat 513
Query: 121 tctatcacagacacatgccactctggtacctcactttctgcctgctgtcccctgggcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tctatcacagacacatgccactctggtacctcactttctgcctgctgtcccctgggcagc 453
Query: 181 caggctctgcccatcatagaccttcactcttctcagcccctgcagtacctggagaagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caggctctgcccatcatagaccttcactcttctcagcccctgcagtacctggagaagcca 393
Query: 241 caagagaggattacagacaatgaactgttagcacaacaggattctcgctttctctctcct 300
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 392 caagagaggagaacagacaatgaactgttagcacaacaggattctcgcttcctctctcct 333
Query: 301 cagtcctgtgctttccaagtgattgccattaattctgaccctacaatgttttcgggatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cagtcctgtgctttccaagtgattgccattaattctgaccctacaatgttttcgggatcc 273
Query: 361 tgtccatgtctctgctgttcttaggcagagactctgagagggtctcttctcaggattgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgtccatgtctctgctgttcttaggcagagactctgagagggtctcttctcaggattgat 213
Query: 421 gataaagacacc 432
||||||||||||
Sbjct: 212 gataaagacacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_e07.g1 MSMg01no532_e07.g1 CHROMAT_FILE:
MSMg01no532_e07.g1 PHD_FILE: MSMg01no532_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:09 2005
(637 letters)
>mm_chr9_14835457_14836494
Length = 1038
Score = 971 bits (502), Expect = 0.0
Identities = 590/638 (92%), Gaps = 32/638 (5%)
Strand = Plus / Plus
Query: 1 tttaaatactgctgtcacctaagacaaactgcctcagacacatagaaattagttacaaat 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaatacttctgtcacctaagacaaactgcctcagacacatagaaattagttacaaat 260
Query: 61 ttgtatcttgggcacacaagacttt-aaagtgaaaggggatgttgctgtaattacctcat 119
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtatcttgggcacacaggactttaaaagtgaaaggggatgttgctgtaattacctcat 320
Query: 120 cctttttctttttttctttttattttcttttctttttatttttattttatttatttattt 179
||||||||||||||||||||| |||| |||||| ||||| ||||
Sbjct: 321 cctttttctttttttctttttctttt-ttttct-----tttttctttt------------ 362
Query: 180 atttatttttttgggtttttcaagacagggtttctgtgtgtagccttggctgtcctggaa 239
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 -------------ggtttttcaagacagggtttctgtgtgtagccttggctgtcctggaa 409
Query: 240 ctcactctgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcccaac 299
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 410 ctcactctgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcccaag 469
Query: 300 tgctgggattaaaggtgtgcgtgcaccctgacttctctcagagacaactatgcctctctg 359
||||||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 470 tgctgggatcaaaggcgtgcgtgcaccctgacttccctgagagacaactatgcctctctg 529
Query: 360 tcaacacactcctaacacgtgcaaagcataggctctccatacaaagcaaggtgcaccttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tcaacacactcctaacacgtgcaaagcataggctctccatacaaagcaaggtgcaccttc 589
Query: 420 atttgtgcttgcctggttttttccatattctggacttctgcacctggggtagagcacagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atttgtgcttgcctggttttttccatattctggacttctgcacctggggtagagcacagg 649
Query: 480 gaaggccagggctttttccttacagtgccagtttgagaagcgtaagatgccagcttcctg 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 650 gaaggccagggctttttccttacagtgccagttagagaagcgtaagatgccagcttcctg 709
Query: 540 ttaagcggtgatgtcagtcacctgtgttattctgcggggtgctatgtagctctcgtgact 599
|| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 710 tttagcagtgatgtcagtcacctgtgttattctgctgggtgctatgtagctctcgtgact 769
Query: 600 gcagaagtgacttctctgtgaaacgctagggatctggg 637
||||| ||||||||||||||||||||||||||||||||
Sbjct: 770 gcagacgtgacttctctgtgaaacgctagggatctggg 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
