TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTACAAATTGTGGAGAGTTGGTATGCTGCAGATTTATAACTCAATTATTA
TTACCCAGTGAAATCCTTTTGTAACAATGTATTAACAAACTACAAGCTTG
CACCAACCCAAAGGCTAGGAGTGTCACCAGATACCACCTGAAGCCTATTC
CTAATTCCCCAGGTTTTCTGTCACTGGCCGATCTGATGCTCCCACCATGT
ATTTGGAAAATGCCTTGATTTATGACCTTCTTTTGTTCTCTAATTAATAA
ATTCTCCAGAAAACTCTTACCTCCATACACCTGAACATGGCATTTGGCAT
AGCTTGACTCCACATTCCTGGCTCAGGATCACTGATACTTGGCTTTGGAG
TAATTTATCCCTTATTCCTTTTGAGGGAAGAGCTGTGTTTTCGCATTCGT
CATGGCTCTAACATAGTTGTCCCGTGGCTGCTTCTCCCATCCCTTTGCAC
AGCCACACTTGAACCCATTAGCAGTGGAGACCACTTAGATGTTGAATCTT
GACCTCCCTCTTTGAACTGTGTGACTCTAAAGAATCCTTTGAGCTCTCTG
AATTGCTTTTCCTGTGTGAAGAGCAGTCTGCACCCTCCTCCTGCCTGCCT
ATAGATGTAGCAATTTTCCTCACCACTTTTATTCCTAGGGGAGAGGAGAG
TGCTGGGCATTGGTGGACACTACTCCAATGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAGGTTCGGGATAGGATCATCATAGACTAGAC
CAACGACAGTAAGCTCAGCAGAAAACAAAACAGAGCACCACTCACATGCA
CTCTTGCTGCAGGATCTTCACAGGCAGGCTGGCATCTCACTGGTCAGGTT
TCATTGCAGAAAGAGGTACCATGACATGCTATGAGAAAGAACTGCGTAAC
AAACAAGACTTAAACTTCACTTAAACACAATGGTCTTCTCTCAGAAGCTG
TATCTGTCTTCAGGTCATCATCTTCGGGATGTAGTCCATCACTGTTCAGA
CCCGGTACGTCTCACAACTGTTTGTACAATCAATTTGTACATTCACTACA
TTCACTGCAGCCACTCCAACTTAGAAAGGCCAGAGTAGGAGAAGCTGCTG
TGTTGGGCCAGGACTATTTAACAGTACATTTCCGAGAAGCTGATTCTCTT
TGCACCAACAGTAAAAATGTATGCTGGCAAAAATGTAAATCTAGATTTCA
TACATACCTTTTAAAAGAGTCAGGCTTTAATCAAGTTATTTTCTGTTATG
AATTCTGTCGGAAGCTTTGGGCTCCCCTTCATCTAATGAAAAGAAACACA
TTTTAAGCATCACACACCACTTCCTATTGCTCTAATACTTCAATTAGAAA
ACTAAGCTGTATCTCCCTTACCTTTTTATCTTTTTGCAACTGCTTCGAGG
ATG

Query= MSMg01no534_e09.b1 MSMg01no534_e09.b1 CHROMAT_FILE:
MSMg01no534_e09.b1 PHD_FILE: MSMg01no534_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:44 2005
         (687 letters)



>mm_chr9_89128089_89129175
          Length = 1087

 Score = 1239 bits (641), Expect = 0.0
 Identities = 665/673 (98%), Gaps = 2/673 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  attgtggagagttggtatgctgcagatttataactcaattattattacccagtgaaatcc 75
           |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct: 216 attgtggagagttggtatgctgcagatttataactcaattattattgcccagtaaaatgc 275

                                                                       
Query: 76  ttttgtaacaatgtattaacaaactac-aagcttgcaccaacccaaaggctaggagtgtc 134
           ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 276 ttttgtaacaatgtattaacaaactactaa-cttgcaccaacccaaaggctaggagtgtc 334

                                                                       
Query: 135 accagataccacctgaagcctattcctaattccccaggttttctgtcactggccgatctg 194
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 335 accagataccacctgaagcctattcctaattccccagcttttctgtcactggccgatctg 394

                                                                       
Query: 195 atgctcccaccatgtatttggaaaatgccttgatttatgaccttcttttgttctctaatt 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atgctcccaccatgtatttggaaaatgccttgatttatgaccttcttttgttctctaatt 454

                                                                       
Query: 255 aataaattctccagaaaactcttacctccatacacctgaacatggcatttggcatagctt 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aataaattctccagaaaactcttacctccatacacctgaacatggcatttggcatagctt 514

                                                                       
Query: 315 gactccacattcctggctcaggatcactgatacttggctttggagtaatttatcccttat 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gactccacattcctggctcaggatcactgatacttggctttggagtaatttatcccttat 574

                                                                       
Query: 375 tccttttgagggaagagctgtgttttcgcattcgtcatggctctaacatagttgtcccgt 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tccttttgagggaagagctgtgttttcgcattcgtcatggctctaacatagttgtcccgt 634

                                                                       
Query: 435 ggctgcttctcccatccctttgcacagccacacttgaacccattagcagtggagaccact 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ggctgcttctcccatccctttgcacagccacacttgaacccattagcagtggagaccact 694

                                                                       
Query: 495 tagatgttgaatcttgacctccctctttgaactgtgtgactctaaagaatcctttgagct 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tagatgttgaatcttgacctccctctttgaactgtgtgactctaaagaatcctttgagct 754

                                                                       
Query: 555 ctctgaattgcttttcctgtgtgaagagcagtctgcaccctcctcctgcctgcctataga 614
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ctctgaattgcttttccagtgtgaagagcagtctgcaccctcctcctgcctgcctataga 814

                                                                       
Query: 615 tgtagcaattttcctcaccacttttattcctaggggagaggagagtgctgggcattggtg 674
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 815 tgtagcaattttcctcaccacttttattccaaggggagaggagagtgctgggcattggtg 874

                        
Query: 675 gacactactccaa 687
           |||||||||||||
Sbjct: 875 gacactactccaa 887


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space:   729129
Effective search space used:   729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)