Query= MSMg01no534_k16.b1 MSMg01no534_k16.b1 CHROMAT_FILE:
MSMg01no534_k16.b1 PHD_FILE: MSMg01no534_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:15 2005
(675 letters)
>mm_chr9_94165017_94166091
Length = 1075
Score = 1259 bits (651), Expect = 0.0
Identities = 666/671 (99%)
Strand = Plus / Minus
Query: 5 gaattcttgtctatcttttacgggaggcagtggattaaggaaagcctggagatctggaat 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 875 gaattcttgtctatcttttacgggaagcagtggattaaggaaagcctggagatcttgaat 816
Query: 65 ttttcactcaaattcacatcagaaacactcttatcagaagtatagcgtgtagcccagtag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ttttcactcaaattcacatcagaaacactcttatcagaagtatagcgtgtagcccagtag 756
Query: 125 aagaacaattgccggggttcagtccccagcaccaaataaagaatataaaaaatagtagca 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aagaacacttgccggggttcagtccccagcaccaaataaagaatataaaaaatagtagca 696
Query: 185 tgctgtgacatggagaattgtgtacagagaatttaatgagaagtaaatttggtacaacct 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 695 tgctgtgacatggagaattgtgtacagagaatttaatgagaagtaaatttggtagaacct 636
Query: 245 ctgtgggaagtgaagggagcagaactgtcagtgggcaaatggcttctgtatgtgtcaagg 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 635 ctgtgggaagtgaagggagcagaactgtcagtgggcaaatggcttctgtacgtgtcaagg 576
Query: 305 atcttttcgttgtgagtggtacaagggagttttcctcccaggttattctgaacgataata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atcttttcgttgtgagtggtacaagggagttttcctcccaggttattctgaacgataata 516
Query: 365 acaggactgagtcctttgtaccttgacacccaccagttacagactacagaagagggaaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 acaggactgagtcctttgtaccttgacacccaccagttacagactacagaagagggaaga 456
Query: 425 ggcggctaacaaagtggctggtgtctacaaaaatcaagttctggaggcaaaactagttgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ggcggctaacaaagtggctggtgtctacaaaaatcaagttctggaggcaaaactagttgt 396
Query: 485 aagcaatctcttgctgtttgtcacaagctggagactacctttgtgtcttggggtgggttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aagcaatctcttgctgtttgtcacaagctggagactacctttgtgtcttggggtgggttt 336
Query: 545 aaagccgtgcagcatacctgtctattacaatctttctccaggtcattagctctgaccagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaagccgtgcagcatacctgtctattacaatctttctccaggtcattagctctgaccagg 276
Query: 605 gggcgaagactctggggtctaactgttcaggattgtagaatagaccctttagcttaaaat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gggcgaagactctggggtctaactgttcaggattgtagaatagaccctttagcttaaaat 216
Query: 665 cctacacaaat 675
|||||||||||
Sbjct: 215 cctacacaaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no534_k16.g1 MSMg01no534_k16.g1 CHROMAT_FILE:
MSMg01no534_k16.g1 PHD_FILE: MSMg01no534_k16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:15 2005
(632 letters)
>mm_chr9_94134689_94135720
Length = 1032
Score = 1110 bits (574), Expect = 0.0
Identities = 617/636 (97%), Gaps = 10/636 (1%)
Strand = Plus / Plus
Query: 1 agcagactgagttacccactggatctaatcttgtggctcactgcttctaagagagcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agcagactgagttacccactggatctaatcttgtggctcactgcttctaagagagcattg 252
Query: 61 accttggtttccacatgggaagaagccaagttggaaagctgacattaatggatgcttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 accttggtttccacatgggaagaagccaagttggaaagctgacattaatggatgcttaca 312
Query: 121 gtgtggcagagtgcaaagcttcctttgtagtt-catctccttttaatctccacagccacc 179
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 313 gtgtggcagagtgcaaagcttcctttgta-ttgcatctccttttaatctccacagccacc 371
Query: 180 ccataaaaacagttaattgtctgcatttatagaggaagaaactgaaactcagaagaggaa 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccataaaaacagctaattgtctgcatttatagaggaagaaactgaaactcagaagaggaa 431
Query: 240 aattatttactatctccatcacagccagctgcttttaaagccagtgttactgtcaagatg 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 432 aattatttactatctccatcacagccagctgcttttaaagccactgttactgtcaagctg 491
Query: 300 caagcctataaccacagctattccagtgactaggacaagaagttgtaaagtttgaggact 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 caagcctataaccacagctattccagtgactaggacaagaagttgtaaagtttgaggact 551
Query: 360 gcctgagctacatacagactgatttcaagaccagcctgggtaatgtaaaattaaaaagtt 419
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 552 gcctgagctacatacagactgagttcaagaccagcctgggtagtgtaaaattaacaagtt 611
Query: 420 taaaaagagagctag--------ttctagtgtagagttcttgcctatctcaggagagtct 471
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 612 taaaaagagagctagggttatagttctagtgtagagttcttgcctatctcaggagagtct 671
Query: 472 gtgaggctttgagcttaatcctcaagtactgcagacaaattagcaaacaaataagtaaat 531
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtgaggctttgggcttaatcctcaagtactgcagacaaattagcaaacaaataagtaaat 731
Query: 532 aagtaaacgcttgtcctttgtcctctatgctagtgacagaaaagataagagagttcaaaa 591
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 732 aagtaaacgcttgtcctttgtcctctgtgctagtgacagaaaaggtaagagagttcaaaa 791
Query: 592 gcacttagctataatgtcacccaacattagtttttt 627
||||||||||||||||||||||||||||||||||||
Sbjct: 792 gcacttagctataatgtcacccaacattagtttttt 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
