NNAAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGA
TCCGCGGAATTCAATCTTTATTGGTACTTATAATAAAACAATACTAAAAG
AGAGCACGTGGATCCATACACCAGACTAACGAGGGAATAGGGTATGAGTG
TACGGGTTATGAGAATGCCTGCTTCCAGGAGGTTGAGTTTCCTTGAAACT
TCCTGCCTTGTGAGTGCTTCCAGGCTCTTGGTCTGCCAAGCAGACTTCAC
TGGAGTGTGCGTAGCAAGCCACTCTCTGCCTGTGGTCTCTCTGCCTCTAG
GCTAACGCCATGTGGTAGTCTTCTCTGGTTCATCTGCCTCAGAGCTGCTT
GTACCTTCTCAGCCATCTACTCCCTTTGGCTAGTTGTCACAAATCCTCTT
AACCCAGTAAATCAAAACTCTAGAAGCTTATAATTAATCAGTCAGATTTC
TATATCAATAAATTATCAATTCACAAGATGCCCACAAAATAATTTCAGAG
CCTATTGATAATGAGATGAGCTGCCCACCTAGATTAGACAAATTATCCCA
ATTATTCTATTTTTTTATGATATCCATAGCTACCTGTGACTATTTAAAGC
CACATGGAATCTGGATCATCTTTCTTTTCCTCCATCTTCCTTCCTTCCCC
AGCCCCCACCTGTCCCTGTCTCTGTTCCTGAAACTCTTAGCACTGCCTCC
TTTTTCCTTGTACAATCACGGGCGTCTTGGTGTATTATATTTAAATTAAT
CGGAAGAAGTTCTGCTTCCGAAAATATCT

TACCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGACAATTCCAATTTCCA
GCTGTTCTTTCTCCTCTTTCCAGTCTTTGCTCTAATACATGCATATAATC
TGGTTTTGTGGTTCTCAGCTCCCAGATTTAATGAGTCATTTCAGCTTTAA
GCAAATATTTGTAACCTGCATTAATAAAATAGTTAAATTTATTGATAATA
TATTTAACCTATGTCTATAATTTTGAAAAATACTATATCTTACATACAAA
TACAGGATACCTGTTCTTATGTTTGCTTGTTGGCTGTAAAGAGTTTAACA
TATAGTTAAAATACCCTTGAAGTTGACTATTCATAATTATCCACAGCAAG
TATAAAGAGCTAACAGCTTCCTGAAAGTTGCATTTAATATTTTAAAGCAT
ATTTAAAGGGGGGACTTTCCAGATCATTTTAATAAAAGAAATAAAGGATA
TTCTTCAAGTCAAACAATTCAGATTCACTGCTTTATTTTAAGTATCTTCC
TATTTTCACTCTAACTCTTGTCACTCCATCTAATTGCTTTATTATGGATT
ACATCAATAAATAATGGCAAGATTCTAAAAGTGGTTTATCAGTATGATGA
AAAATGTAAGCAGCATAATATATTTGTGTGTTTGATCTATCCCAGGGAGA
AAGAAGAATGCATTCAGAGCGACTAATGATTTTAAATATTAAAAAAAATT
ACCATGGATTTGGGGGGGTTAATTAAGTCATTTTATCN

Query= MSMg01no535_l24.g1 MSMg01no535_l24.g1 CHROMAT_FILE:
MSMg01no535_l24.g1 PHD_FILE: MSMg01no535_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:39 2005
         (597 letters)



>mm_chr9_76420795_76421791
          Length = 997

 Score = 1100 bits (569), Expect = 0.0
 Identities = 590/597 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagacaattccaatttccagctgttctttctcctctttccagtctttgctctaatacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 974 tcagacaattccaatttccagctgttctttctcctctttccagtctttgctttaatacat 915

                                                                       
Query: 61  gcatataatctggttttgtggttctcagctcccagatttaatgagtcatttcagctttaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gcatataatctggttttgtggttctcagctcccagatttaatgagtcatttcagctttaa 855

                                                                       
Query: 121 gcaaatatttgtaacctgcattaataaaatagttaaatttattgataatatatttaacct 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 854 gcaaatatttgtaacctgcattaataaaacagttaaatttattgataatatatttaacct 795

                                                                       
Query: 181 atgtctataattttgaaaaatactatatcttacatacaaatacaggatacctgttcttat 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 794 atgtctataattttgaaaaatactatatcttacatacaaatacagggtacctgttcttat 735

                                                                       
Query: 241 gtttgcttgttggctgtaaagagtttaacatatagttaaaatacccttgaagttgactat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gtttgcttgttggctgtaaagagtttaacatatagttaaaatacccttgaagttgactat 675

                                                                       
Query: 301 tcataattatccacagcaagtataaagagctaacagcttcctgaaagttgcatttaatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcataattatccacagcaagtataaagagctaacagcttcctgaaagttgcatttaatat 615

                                                                       
Query: 361 tttaaagcatatttaaaggggggactttccagatcattttaataaaagaaataaaggata 420
           |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttaaagcgtatttaaaggggggtctttccagatcattttaataaaagaaataaaggata 555

                                                                       
Query: 421 ttcttcaagtcaaacaattcagattcactgctttattttaagtatcttcctattttcact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttcttcaagtcaaacaattcagattcactgctttattttaagtatcttcctattttcact 495

                                                                       
Query: 481 ctaactcttgtcactccatctaattgctttattatggattacatcaataaataatggcaa 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctaactcttgtcactccatttaattgctttattatggattacatcaataaataatggcaa 435

                                                                    
Query: 541 gattctaaaagtggtttatcagtatgatgaaaaatgtaagcagcataatatatttgt 597
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 434 gattctaaaagtggtttatcagtatgatgaaaaatgtaagcaacataatatatttgt 378


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)