NNTGCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCAATTGAGGAATCTCAAATGGCTGAGAAGCCATCAGGGAA
ATGCAAATCAAAACAACCCTAAGATTCTACATCACACCAGTCAGAACGGC
TAAGATCAAAAACTCAGGTGACAGCAGATGCTGGTGAGGACATGGAGAAA
GTGGGAGCAGACCAGATATACCTCAGTGGAAGAAACGATACAGAAAATGT
GGTATATTTACACAATGGAACACTACTCAGCTATTAAAAATGAGAACTTC
ACAAACTTTGTTGGAAAATGTATAGAACTAGAAAATATCATCTTGATTGA
GGTAGCCCAGACACCAGGAGACATACATAGTATATACTCACTAATAAGTG
ATTATTAGCCCCAAAGCTCAGAATATCCATGATACAGCTTGCAAACCATA
TGAAGATTAACAAAAAGAAAGGCCAAAGTGCGGATGATTAAAACCCACAT
AGAAGGGGGAACAAAATAATAACCATGGGAAGCAGGGGAGGGAGGGATCT
GGGTGGGAAAGGGTGCTGGGAGAAAAAAAAAAAAGGGAGCAGGACCAGTT
ATAAGAAGAGACAAGAGAGAAGTACAGATGGCCAGGAGAATCAATAGAAA
TGTAGCAGTGGGGTAGGGGGCAACCTGGGGAACCACTAGAAAGTCCCATA
TACCTGGTATAGGAGAGGCTCCCCAGGACCAATGGAGATATTACCCAAA

TTTCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGATGTACATGTAATCTTATTAA
GGATTGTGTTGATTAGTGTACAGATAGATGTATTGTTTCTGCTTCTCATT
AGCCATGGCTTAATATGTAGTTCTGGATATGCTAAAAGAAGCAACAGGGT
GATTGTCAGATTGAACTTTTTTAAATTGTGGACTTCAACAAAACCGTAAC
AGTCAAGATAATTTCTTTTTGCTCATCTGTGCAAATGGAAAGATGTCCTG
ACTCAATCCAAAATTAAAGTGTCCCAACAAATGTGGAAATAATAAGGAAA
TGATAAACTGTTTTGTAAACATGAATTGATATAGCCACAGTCTGACAAAC
ATTGGCTTGCTTCTATGTCATGAGTTGCTTTTTTGTATTTTTTCCTTTTC
CACAAATAGTAACACATTCATGAGCCTGTCAAAGTTAAAAAGACACAAGG
GAGTACGATATGCCATAAGCCAGCAGAACTGCGTTTTTCCATAGGAGAAC
CGGAAATGAAAACAGAAAGAAGAAATGTAAGATTGTAAAGAGGAAAAATT
GCTTCAAAAAGGTGACATATGTTTAGTAGAGCATAAGATGAATTTGGTCT
GAGTTGGGAATACAAACAGGGATTTATAGTACCGCTGACATCCCAGTCCC
TCATTTACAGAATCTATTTTCTACCTTGGAGATTTAGAAGATCAAAACTA
CACATC

Query= MSMg01no537_p18.g1 MSMg01no537_p18.g1 CHROMAT_FILE:
MSMg01no537_p18.g1 PHD_FILE: MSMg01no537_p18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:31 2005
         (662 letters)



>mm_chr9_17394577_17395637
          Length = 1061

 Score = 1166 bits (603), Expect = 0.0
 Identities = 648/663 (97%), Gaps = 3/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatgtacatgtaatcttattaaggattgtgttgattagtgtacagatagatgtattgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatgtacatgtaatcttattaaggattgtgttgattagtgtacagatagatgtattgtt 260

                                                                       
Query: 61  tctgcttctcattagccatggcttaatatgtagttctggatatgctaaaagaagcaacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcttctcattagccatggcttaatatgtagttctggatatgctaaaagaagcaacag 320

                                                                       
Query: 121 ggtgattgtcagattgaacttttttaaattgtggacttcaacaaaaccg-taacagtcaa 179
           ||||||||||||||| |||| |||| ||||||||||||||||||||| | ||||||||||
Sbjct: 321 ggtgattgtcagattaaactgttttgaattgtggacttcaacaaaac-gataacagtcaa 379

                                                                       
Query: 180 gataatttctttttgctcatctgtgcaaatggaaagatgtcctgactcaatccaaaatta 239
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 380 gataatttctttttgctcatctgtgcaaatggaaagatgtactgactcaatccaaaatta 439

                                                                       
Query: 240 aagtgtcccaacaaatgtggaaataataaggaaatgataaactgttttgtaaacatgaat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aagtgtcccaacaaatgtggaaataataaggaaatgataaactgttttgtaaacatgaat 499

                                                                       
Query: 300 tgatatagccacagtctgacaaacattggcttgcttctatgtcatgagttgcttttttgt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgatatagccacagtctgacaaacattggcttgcttctatgtcatgagttgcttttttgt 559

                                                                       
Query: 360 attttttccttttccacaaatagtaacacattcatgagcctgtcaaagttaaaaagacac 419
           ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 560 attttttccttttccacaaatagcaacacattcatgggcctgtcaaagttaaaaagacac 619

                                                                       
Query: 420 aagggagtacgatatgccataagccagcagaactgcgtttttccataggagaaccggaaa 479
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| 
Sbjct: 620 aagggagtacgatatgccataagccagcagaactgcatttttccataggagaactggaa- 678

                                                                       
Query: 480 tgaaaacagaaagaagaaatgtaagattgtaaagaggaaaaattgcttcaaaaaggtgac 539
           |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||
Sbjct: 679 tgaaaacagaaagaagaaacctaagattgtaaagaggaaaaactgcttcaaaaaggtgac 738

                                                                       
Query: 540 atatgtttagtagagcataagatgaatttggtctgagttgggaatacaaacagggattta 599
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgtgtttagtagagcataagatgaatttggtctgagttgggaatacaaacagggattta 798

                                                                       
Query: 600 tagtaccgctgacatcccagtccctcatttacagaatctattttctaccttggagattta 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tagtaccgctgacatcccagtccctcatttacagaatctattttctaccttggagattta 858

              
Query: 660 gaa 662
           |||
Sbjct: 859 gaa 861


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1061
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1051
Effective search space:   685252
Effective search space used:   685252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)