NNNTTCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCTGATCTTTCCAAGACTTTTATCATGAAGGGGTGTTGGATTT
TGTCGAATGCTTTCTCAGCATCTAACTAGATGATCATGTGGTTTTTGTCT
TTGATTTTGTTTATATAATGGATTACGTTGATGGGTTTCCATATATTAAA
CCATCCCTGCATCATTGGGATGAAGCCTACATGGTCATGATGGATTATTG
TTTTGATGTGTTCTTGGATTCAGTTTGTGAGGATTTTATTGAGTGTTTTT
GCAACGATATTCAACGAAGTTCTCTATCTTTGTTGGGTCTTTTAGTGGTT
TAGGTATCAGAGTAATTATGGCTTTGTAGAATGAATTGGGTAAAGTACCT
TCTGTTTCTATTTTGTGGAATAGTTTGAGAATAACTGGAATTAGGTCTTC
TTTTAAGCTCTGATAGAACTCTGCACTAAACCCATCTGGTCCTGGGCTTT
TTTTGGTTGGGAGACTATTAATGACTGCTTCTAGTTCTTTAGGAGATATA
GCACTGTTTAGGTCATTAGTCTGATCCTGATTTAACTTTGGTACCTGGTA
TCTGTCTAGAAATTTGTCCATTTCATTCANGTTTTCCAGTTTTGTTGAGT
ATAGACTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTCTCANGATCTG
TTGTTATGTCTCCCTTTTCATTTCTGATTTTGTAATTTGATGCTGTCCCT
GTGTCCTCTAGTGACTCT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCAAGATTAGGTAGCTTTCTCTAGTAAAAGCCAT
GTGGTACATCAAGACATGGTTGAATCCAAAGGGACATATAGGTCTGTGAG
TAGACATGAAACCCCAGGGCTGCTGCACTGTGTAATAGCGCTTTCATAGA
AATGAATATAGTCTGTACAAAGGAGATCAATCTTTCTTCCATACAGAGAC
ATTAGAATTGAATTGAATTTTAAAAAATTACAAAATATATTGTGTTGGAG
CTATGGTTCCATGGTTAAAGTACTTGTCTTGAAAGCTTGAAGACTAAAGT
TCTGGTCCCCATAACCCATTTAAATGTTATGTGAGCATGGAAGCCCAAAA
GGAATCCCTGTACACAAAAGGGCATACCACAGCTAACTAGCTAGTTAGTT
TAGCAGCATTTGGTGTGTGCTAGATCCAGATGAAGATTCTGCCTCAGTGA
ATAATGTGGAGAACAATCAAGAAAGGTTCCATGTGTCTACATGTATATAC
ACAGGCACTCATACCAAATGCACATAAGAAGTAAGTAAATAAATAAAATT
ATAGGTCTTGTTTGAGAAATGAAGTTATTTGAAATACAAGTTTTTTTGTG
TTATTTTTAATTATTTATGATTAAACCATGTTGTAATTTATCACTTCATC
TGCAACTTGTGCTTTAGAAAATTCAGATATCACTTAAGTAATATATGGTA
CTATATAAAATNAA

Query= MSMg01no541_d22.g1 MSMg01no541_d22.g1 CHROMAT_FILE:
MSMg01no541_d22.g1 PHD_FILE: MSMg01no541_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:49 2005
         (575 letters)



>mm_chr9_33925008_33925982
          Length = 975

 Score = 1035 bits (535), Expect = 0.0
 Identities = 565/575 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaagattaggtagctttctctagtaaaagccatgtggtacatcaagacatggttgaatc 60
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 201 ccaagattaggtagctttctctagtaagagccatgtggtgcatcaagacatggttgaatc 260

                                                                       
Query: 61  caaagggacatataggtctgtgagtagacatgaaaccccagggctgctgcactgtgtaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagggacatataggtctgtgagtagacatgaaaccccagggctgctgcactgtgtaat 320

                                                                       
Query: 121 agcgctttcatagaaatgaatatagtctgtacaaaggagatcaatctttcttccatacag 180
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcactttcatagaaatgaatatagtctgtacaaaggagatcaatctttcttccatacag 380

                                                                       
Query: 181 agacattagaattgaattgaattttaaaaaattacaaaatatattgtgttggagctatgg 240
           |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 agactttagaattgaattgaattttaaaagattacaaaatatattgtgttggagctatgg 440

                                                                       
Query: 241 ttccatggttaaagtacttgtcttgaaagcttgaagactaaagttctggtccccataacc 300
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ttccatggttaaagtacttgtcttgaaagcttgaggactaaagttctggtccccataacc 500

                                                                       
Query: 301 catttaaatgttatgtgagcatggaagcccaaaaggaatccctgtacacaaaagggcata 360
           |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 catttaaatgttgtgtgagcatggaagcccaaaaagaatccctgtacacaaaagggcata 560

                                                                       
Query: 361 ccacagctaactagctagttagtttagcagcatttggtgtgtgctagatccagatgaaga 420
           |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 561 ccacagctaactagctagctagtttagcagcgtttggtgtgtgctagatccagatgaaga 620

                                                                       
Query: 421 ttctgcctcagtgaataatgtggagaacaatcaagaaaggttccatgtgtctacatgtat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctgcctcagtgaataatgtggagaacaatcaagaaaggttccatgtgtctacatgtat 680

                                                                       
Query: 481 atacacaggcactcataccaaatgcacataagaagtaagtaaataaataaaattataggt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacacaggcactcataccaaatgcacataagaagtaagtaaataaataaaattataggt 740

                                              
Query: 541 cttgtttgagaaatgaagttatttgaaatacaagt 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 741 cttgtttgagaaatgaagttatttgaaatacaagt 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)