Query= MSMg01no543_g03.b1 MSMg01no543_g03.b1 CHROMAT_FILE:
MSMg01no543_g03.b1 PHD_FILE: MSMg01no543_g03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:44 2005
(106 letters)
>mm_chr9_97004495_97005001
Length = 507
Score = 184 bits (95), Expect = 2e-51
Identities = 104/107 (97%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 1 gtgggtgagtgggt-cattcatgggtgctgtgaaattagggctcaatacatgctagacaa 59
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtgggtgagtgggtacattcgtgggtgctgtgaaattagggctcaatacatgctagacaa 248
Query: 60 atactatcagtagccttatcccagctgtattccctttagaaagtaag 106
|||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 247 atactatcaggagccttatcccagctgtattccctttagaaagtaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 507
Length adjustment: 8
Effective length of query: 98
Effective length of database: 499
Effective search space: 48902
Effective search space used: 48902
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no543_g03.g1 MSMg01no543_g03.g1 CHROMAT_FILE:
MSMg01no543_g03.g1 PHD_FILE: MSMg01no543_g03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:44 2005
(570 letters)
>mm_chr9_96877561_96878530
Length = 970
Score = 1002 bits (518), Expect = 0.0
Identities = 554/570 (97%), Gaps = 7/570 (1%)
Strand = Plus / Plus
Query: 1 gctttttcaattagaagcacttggcagggggacaggtccagtggccagtatcactcaccc 60
|||| |||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 208 gcttcttcaatcagaagcacttggcagggggacaggtccagt-------atcactcaccc 260
Query: 61 ccgcaggcagggcgcatgctctgaccagcctgtggctttgtaagaagcgagaagagtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgcaggcagggcgcatgctctgaccagcctgtggctttgtaagaagcgagaagagtgat 320
Query: 121 cctgccacaggccttgaagggactctcccaaggtcacagagctgattaacagcagagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgccacaggccttgaagggactctcccaaggtcacagagctgattaacagcagagctg 380
Query: 181 tcaacacccacagattttggactgattcccgtgaaatccctgaaaattggtttttcaacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaacacccacagattttggactgattcccgtgaaatccctgaaaattggtttttcaacg 440
Query: 241 ataacaagcttttgacaaattcccctaaaaataagggaatgcttggtccaaacgcatcca 300
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 441 ataacaagcttttgacaaattcccctgaaaataagggattgcttggtccaaacgcatcca 500
Query: 301 tccctctttgggcggctgaccctgaggctgctggcagtcatcagcctgcagccaagatat 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccctcgttgggcggctgaccctgaggctgctggcagtcatcagcctgcagccaagatat 560
Query: 361 ccactgactatgagtctttactatagggccggggtgttgggaaggtcatggcctgtgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 561 ccactgactatgagtctttactatagggccggggtgttgggaaggtcatggcccgggtca 620
Query: 421 ctggcagattgcctggctagcatgtgagttccatcaatccctccatccctagcattggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggcagattgcctggctagcatgtgagttccatcaatccctccatccctagcattggga 680
Query: 481 aagggaaggtgatatggctgtggtccaggcaaaggagcctcaagacctgttcagactcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagggaaggtgatatggctgtggtccaggcaaaggagcctcaagacctgttcagactcac 740
Query: 541 tctcgccccatcctagactctggcttctgg 570
|| ||||||| |||||||||||||||||||
Sbjct: 741 tcacgccccaccctagactctggcttctgg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
