Query= MSMg01no544_b16.b1 MSMg01no544_b16.b1 CHROMAT_FILE:
MSMg01no544_b16.b1 PHD_FILE: MSMg01no544_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:39 2005
(591 letters)
>mm_chr9_37774647_37775637
Length = 991
Score = 1091 bits (564), Expect = 0.0
Identities = 582/588 (98%), Gaps = 2/588 (0%)
Strand = Plus / Minus
Query: 5 gaattcagctaacacacacaggttcaattacaaaaagtagaaacattaagtcagagatca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gaattcagctaacacacacaggttcaattacaaaaagtagaaacattaagtcagagatca 632
Query: 65 tattgctgagt-ttgctagactataaactaattgtactgtctcagccacatgaatgaggt 123
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tattgctgagtctt-ctagactataaactaattgtactgtctcagccacatgaatgaggt 573
Query: 124 aattagagacttgatgaattcaccctgcctgcctcctgtcagacaacttagtactgaacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aattagagacttgatgaattcaccctgcctgcctcctgtcagacaacttagtactgaacc 513
Query: 184 cctgtgtttgtctccacattcctgtaggaggctttagctctggacatgtcagaattgatc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cctgtgtttgtctccacattcctgtaggaggctttagctctggacatgtcagaattgatc 453
Query: 244 agtggcagtcatggaatcttgtctatttaccaggaaaaaaaaaacaaaaaaacaaaaaac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 agtggcagtcatggaatcttgtctatttaccaggaaaaaaaaaacaaaaaaacaaaaaac 393
Query: 304 aatgtatcaaacacatacacattctgagagactcagagtcactgtgtagtagagatcata 363
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aacgtatcaaacacatacacattctgagagactcagagtcactgtgtagtagagatcata 333
Query: 364 ccattgttaatcatttacaaagataatgtgaaagaaaggtacagagcagatagcaggatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccattgttaatcatttacaaagataatgtgaaagaaaggtacagagcagatagcaggatc 273
Query: 424 aacatgttatagagcagatgccatttgcttgggacttctaatgttcatctggccttaatt 483
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 272 aacatgtcatagagcagatgccatttgcttgggacttctaatgatcatctggccttaatt 213
Query: 484 tatcacgtatagacctaactggtatctacagaacatttctcccaaacacaaaagaatata 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 212 tatcacgtatagacctaactggtatctacagaacatttctcccaaacacaaaagaataaa 153
Query: 544 ccttcttctcagcccctcacaaaaacttctccaaaactgcccatgtag 591
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 ccttcttctcagcccctcacaaaaacttctccaaaactgcccatgtag 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_b16.g1 MSMg01no544_b16.g1 CHROMAT_FILE:
MSMg01no544_b16.g1 PHD_FILE: MSMg01no544_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:39 2005
(512 letters)
>mm_chr9_37659797_37660708
Length = 912
Score = 967 bits (500), Expect = 0.0
Identities = 509/512 (99%)
Strand = Plus / Plus
Query: 1 ttgagattatgaggggctgtggggagaccttagggattcatgaaatatttgcttgtctct 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagattatgaggggctttggggagaccttagggattcatgaaatatttgcttgtctct 260
Query: 61 aggagctttggtgagttctgtgtgcatggtgtaagaaccagagaatgttctgaggttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagctttggtgagttctgtgtgcatggtgtaagaaccagagaatgttctgaggttttt 320
Query: 121 aacagttcacaaatagtttccatgggaacttcatttcaatgcatcaaagttttatttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagttcacaaatagtttccatgggaacttcatttcaatgcatcaaagttttatttcaa 380
Query: 181 gtaaaccaagcttctctatctttttgctgttaacttgccacaatataatgaaagtaaagc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gtaaaccaagcttctctatctttttgctgttaacttgccacaatataatgaaagtacagc 440
Query: 241 aaggaaataagatccttgatttaattacctgttacaaaactatgcctcataccaaaactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggaaataagatccttgatttaattacctgttacaaaactatgcctcataccaaaactt 500
Query: 301 aaaactctgtataataggttccttgcttgatttactataaatagaaaattttatgcgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaactctgtataataggttccttgcttgatttactataaatagaaaattttatgcgaag 560
Query: 361 cacatattataactagctcatcagggcaaacataggtgtactacagagcttttatgcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacatattataactagctcatcagggcaaacataggtgtactacagagcttttatgcata 620
Query: 421 tggtatatatgttagcctccaagagtctggcataccatcagatagcatgtgtttgtgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtatatatgttagcctccaagagtctggcataccatcagatagcatgtgtttgtgcaa 680
Query: 481 aggattactctgtccactctacccaagagaaa 512
|||||||||||||||||||||| |||||||||
Sbjct: 681 aggattactctgtccactctactcaagagaaa 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
