AGGGGTGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGTTCTGTTCTGAGCCCCATTTTTTAATGGGGTTA
TTTGATTTTCTGAAGTCCAACTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGG
AGTTTCATTAGGTCCCATTTGTCAATTCTTGATCTCACAGCACAAGCCAT
TGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGT
TCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATC
GATTCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGT
TGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAG
ATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT
CCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCA
CAATTGCTCTGTAATAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAA
GTTCTTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTT

GGTGCGATGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGGCTTGCCCCAGCCAGCAGT
GGAGGTCACCTTGCCCAAGGCTGGCTTCTGAGTGTCAGACAAACAGAGGC
CACAGCAGAGCTAAGGAGCCACCGTCCTCAGCAGGGATGTGAACCCAGAA
AACCAGAGGGTGTGCTTGTTTGGGGGAGAAAACCGATGAGAGACACTCCG
GCAGAAGTGAGCAGGAGAGATGAATTAATGAAAGGCACAGTCATGGCAAA
GTGGACTGCTAGTCTATGAACACAGCTGGATGGCTGGGTTGTGGGCTCTC
CTCCTCAGCCTGGCCCAGATTGTTGTAGCAAAGGGAAACTGTACTGTGTG
TTTCTCTCTTCTTCATGCCCTCCCAGCTCCATGGCGTCTGGTTCATGCTT
CCTTCAACAGACAATTACCCAGATTTCACTACTTTTCCTTGGGGCCCTTT
GACCTCTTCAGTTCCCACTGTGGCTCGGCCCTCCTCCACTGTTGTCTTCT
GTTCGTTCAATTCCCTCACAACACGCCCCGCCCATTCTCTTCTTTTCTGC
TTCCTTTTCCTGTCCTAAGGCCAGGCCCAGAGCCTGTCACCCATTTATCA
ATGCATTGGAACTGTAGCTCAGGTATTGATCTGTGTTTGTTGGGTTTTTT
CCTGTAAACTCGGGCTGTAAAGGTTCATTAGCCTGCCTCACAGTCATTAC
ATC

Query= MSMg01no544_i01.g1 MSMg01no544_i01.g1 CHROMAT_FILE:
MSMg01no544_i01.g1 PHD_FILE: MSMg01no544_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:11 2005
         (530 letters)



>mm_chr9_29837181_29838106
          Length = 926

 Score =  959 bits (496), Expect = 0.0
 Identities = 520/530 (98%), Gaps = 4/530 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttggcttgccccagccagcagtggaggtcaccttgcccaaggctggcttctgagtgtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggcttgccccagccagcagtggaggtcaccttgcccaaggctggcttctgagtgtca 260

                                                                       
Query: 61  gacaaacagaggccacagcagagctaaggagccaccgtcctcagcagggatgtgaaccca 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaaacagaggccatagcagagctaaggagccaccgtcctcagcagggatgtgaaccca 320

                                                                       
Query: 121 gaaaaccagagggtgtgcttgtttgggggagaaaaccgatgagagacactccggcagaag 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaccagagggtgtgcttgtttgggggagaaaaccgatgagagacactccggcagaag 380

                                                                       
Query: 181 tgagcaggagagatgaattaatgaaaggcacagtcatggcaaagtggactgctagtctat 240
           |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 381 tgagcaggagggatgaattaatgaaaagcacagtcatggcaaggtggactgctagtctat 440

                                                                       
Query: 241 gaacacagctggatggctgggttgtgggctctcctcctcagcctggcccagattgttgta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacacagctggatggctgggttgtgggctctcctcctcagcctggcccagattgttgta 500

                                                                       
Query: 301 gcaaagggaaactgtactgtgtgtttctctcttcttcatgccctcccagctccatggcgt 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gcaaagggaaactgtactgtgtgtttctctcttcttcatgccctcccagctccatggcat 560

                                                                       
Query: 361 ctggttcatgcttccttcaacagacaattacccagatttcactacttttccttggggccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggttcatgcttccttcaacagacaattacccagatttcactacttttccttggggccc 620

                                                                       
Query: 421 tttgacctcttcagttcccactgtggctcggccctcctccactgttgtcttctgttcgtt 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 621 tttgacctcttcagttcccactgtggctcggccctcctccactgttgtcttctgttc--- 677

                                                             
Query: 481 caattccctcacaacacgccccgcccattctcttcttttctgcttccttt 530
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 -aattccctcacaacacgccccgcccattctcttcttttctgcttccttt 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 926
Length adjustment: 10
Effective length of query: 520
Effective length of database: 916
Effective search space:   476320
Effective search space used:   476320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)