Query= MSMg01no544_o17.b1 MSMg01no544_o17.b1 CHROMAT_FILE:
MSMg01no544_o17.b1 PHD_FILE: MSMg01no544_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:45 2005
(674 letters)
>mm_chr9_81468392_81469465
Length = 1074
Score = 1222 bits (632), Expect = 0.0
Identities = 661/671 (98%), Gaps = 1/671 (0%)
Strand = Plus / Plus
Query: 5 gaattcttagaaag-aacaaccattgccttggggttttaaaacgcactgaanatacatgc 63
|||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 204 gaattcttagaaagaaacaaccattgccttggggctttaaaacgcactgaaaatacatgc 263
Query: 64 atctcactttaaaagtagtgttaagtacattataaaaccagttgtgaaaacaaatgaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctcactttaaaagtagtgttaagtacattataaaaccagttgtgaaaacaaatgaata 323
Query: 124 cttctcctagagaagtgcttaaaagaagagacttgtagggctacaatctctcataggcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttctcctagagaagtgcttaaaagaagagacttgtagggctacaatctctcataggcaa 383
Query: 184 ggttctacattctccatttcaaacttgttgcaggaaaccatacatagaatataaaacatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggttctacattctccatttcaaacttgttgcaggaaaccatacatagaatataaaacatt 443
Query: 244 tcattaaatccaacaaagtgggctagacagatggctcagtggtaactgactattctttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcattaaatccaacaaagtgggctagacagatggctcagtggtaactgactattctttca 503
Query: 304 gaggataggaatatagttcccagaatccacctggtgattctcaactatctgcaattaatt 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 504 gaggataggaatatagttcccagaatccacctggtgattctcaactatctgcaattgatt 563
Query: 364 cacacagtctcttctgacttctacaagtaccagccatgtatgtgatgcatagacacagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacacagtctcttctgacttctacaagtaccagccatgtatgtgatgcatagacacagat 623
Query: 424 acaagcataacagtcatacacattaaataaaattatcctttaattttttatgataaatgg 483
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acaagcaaaacagtcatacacattaaataaaattatcctttaattttttatgataaatgg 683
Query: 484 taacttctgtaaatcacatttattcctgtaatgagtttgttccttgaagtgtaattttac 543
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 684 taacttctgtaaattacatttattcttgtaatgagtttgttccttgaagtgtaattttac 743
Query: 544 aagcctctcctttatttagctttctaaataaaccgaaaggaactcattatttacatattc 603
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 744 aagcctctcctttatttagctttctaaataaactgaaaggaactcattatttacataatc 803
Query: 604 taaaagtaaaacttcaccattcaaatacttggatttgttcaataaaagatcaatatttat 663
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taaaagtaaaacttcaccgttcaaatacttggatttgttcaataaaagatcaatatttat 863
Query: 664 ttatgaatgtg 674
|||||||||||
Sbjct: 864 ttatgaatgtg 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_o17.g1 MSMg01no544_o17.g1 CHROMAT_FILE:
MSMg01no544_o17.g1 PHD_FILE: MSMg01no544_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:45 2005
(605 letters)
>mm_chr9_81619946_81620950
Length = 1005
Score = 1162 bits (601), Expect = 0.0
Identities = 604/605 (99%)
Strand = Plus / Minus
Query: 1 aacagaggaatctcgaatgactaagaagcacctaaagaaatgttcaaagtctttagtgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 aacagaggaatctcgaatgactaagaagcacctaaagaaatgttcaaagtctttagtgat 915
Query: 61 cagagaaatgcaaatcaaaacaaccatgagatttcacctttcaccaatcagaatgactaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 cagagaaatgcaaatcaaaacaaccatgagatttcacctttcaccaatcagaatgactaa 855
Query: 121 gatcaaaacctcaggtgacaacacatattggcgagaatgtgcagaaagataagttgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 854 gatcaaaacctcaggtgacaacacatattggcgagaatgtgcagaaaaataagttgaaaa 795
Query: 181 ctttaaagcaacaggttgaactaaatttagatggattgatattgttgataaaatttgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctttaaagcaacaggttgaactaaatttagatggattgatattgttgataaaatttgtac 735
Query: 241 tgtagaactgctagaagtgtccatggtagaaattgacagagtaggaggggacccttttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tgtagaactgctagaagtgtccatggtagaaattgacagagtaggaggggacccttttct 675
Query: 301 ctgattagagctcatgtttgggaataactgtgtaaaactgtcagaggattctaccacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctgattagagctcatgtttgggaataactgtgtaaaactgtcagaggattctaccacacc 615
Query: 361 tttcttgttttcctttctcctccttttctttacaagagtgaatggagagtgtatgaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tttcttgttttcctttctcctccttttctttacaagagtgaatggagagtgtatgaaata 555
Query: 421 gaggctctgatgtagactttgcttgggtttggcaggctctctgctgattgataattaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaggctctgatgtagactttgcttgggtttggcaggctctctgctgattgataattaatc 495
Query: 481 ttaaccctctttgcatgtgctcaagcaatcagagcccacatgggtctacataaacccctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttaaccctctttgcatgtgctcaagcaatcagagcccacatgggtctacataaacccctg 435
Query: 541 ggcacagccactaattgagttgctctgcatcttggccagagtccagctctcaagccagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggcacagccactaattgagttgctctgcatcttggccagagtccagctctcaagccagta 375
Query: 601 ctcca 605
|||||
Sbjct: 374 ctcca 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
