XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAAT
GGTATCACTTGAGTGTTTGCCTGTTAAAATTCTATCCATCAAAGTAGAAC
ACATCACTAACCAGTACATCCCCAGGCACTAGCTAGGACAACAAAAATAA
CTGTTCAAAGGAAATCTGAATGGGCTTCACTTGAAGACTGGAAAAGAGAC
ATCTTCAATATGTGTTTAAGATAACAGCACTCAGTCATACTTGAGGCCTT
AGTAGCAAGCTTGCAATTACCTCAAAGGTTTTCTTGTCCAGAAATGTCAC
CTAGCAAACTGCTTTGAAACCTCTAGATTTTAGTTTGTTGTTCTGGTTGA
AAAGTAGAAACAATTTGTTTCCCACATACTGAACTAACAAGTGATACACA
AGAATGATCAAGTTTCTAAAGAAAAGAGCACCTCTAGGCAATCCTATCAG
CAATGCCCTGCACTGCACATGCAGAGCAAGATGCTTTTGCTTTCTGGTAG
AGCACCTTTGCCTATCAGGGTATGATCACTTAGAACATACACAAGGTAAG
AAGAATTCAAAGGATATGAAGCTATGCTAAGAAGGGTAATTTTTCTTCAT
TAAGCTTACTTTTTGGATGAATCAACTTGAATGTTAAGGTACTATTATAC
TGCAATAAGTTTACTGGTTTTATAGAAAAAAATAATCCGGGGCAGTGGTG
GCGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAAAACAACCCTGAAATTCCACCTCACACCAGTCAG
AATGGCTAAGTTCAAAAATTCAGGTGACAGCAGATGCTGGTGAAGATGTG
GAGAAAGAGGAAAACTCCTCCATTGCTGGTGGGATTGTAAGCTTGTACAA
CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACA
ATCCATCAATACCTTTCCTGGGCATATACCCAGAAGGTGTTCCAACTGGT
AATAAGGACACATGCTCCACTATGTTCATAACAGCCTTATTTATAATAGC
CAGAAGCAGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATTTACACAATGGGCTACTACTCAGATATTAAAAACAATG
AATTTGTGAAACTCTTAGGTAAATGGATGGATCTAGAGAATATAATCCTG
AGTGAGGTAACCCAATCACAAAATATGCACTCAATGATATGCACTCATTG
ATAAGAGGACATTAGCCCAGAAACTTAGAATACCCAAGATACAATTTGCA
AAACACAAGAAAATCAAGAAGAAGGGGGACCAACACATGGATACTTCATT
CCTCCTTAGAATAGGGAACAAAATACCCATGAAAGGAGTTACAAAGTTTG
GAGCTGAGAGGAAAGGATGGGACATCCAGAG

Query= MSMg01no545_c20.b1 MSMg01no545_c20.b1 CHROMAT_FILE:
MSMg01no545_c20.b1 PHD_FILE: MSMg01no545_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:05 2005
         (645 letters)



>mm_chr9_4529763_4530807
          Length = 1045

 Score = 1212 bits (627), Expect = 0.0
 Identities = 636/639 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaatggtatcacttgagtgtttgcctgttaaaattctatccatcaaagtagaac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gaattctaatggtatcacttgagtgtttgcctgttaaaattctatccatcaaagtagaac 784

                                                                       
Query: 65  acatcactaaccagtacatccccaggcactagctaggacaacaaaaataactgttcaaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 acatcactaaccagtacatccccaggcactagctaggacaacaaaaataactgttcaaag 724

                                                                       
Query: 125 gaaatctgaatgggcttcacttgaagactggaaaagagacatcttcaatatgtgtttaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gaaatctgaatgggcttcacttgaagactggaaaagagacatcttcaatatgtgtttaag 664

                                                                       
Query: 185 ataacagcactcagtcatacttgaggccttagtagcaagcttgcaattacctcaaaggtt 244
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 atagcagcactcagtcatacttgaggccttagtagcaagcttgcaattacctcaaaggtt 604

                                                                       
Query: 245 ttcttgtccagaaatgtcacctagcaaactgctttgaaacctctagattttagtttgttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttcttgtccagaaatgtcacctagcaaactgctttgaaacctctagattttagtttgttg 544

                                                                       
Query: 305 ttctggttgaaaagtagaaacaatttgtttcccacatactgaactaacaagtgatacaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttctggttgaaaagtagaaacaatttgtttcccacatactgaactaacaagtgatacaca 484

                                                                       
Query: 365 agaatgatcaagtttctaaagaaaagagcacctctaggcaatcctatcagcaatgccctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 483 agaatgatcaagtttctaaagaaaagagcacctctaggcaatcctatcagcaatgtcctg 424

                                                                       
Query: 425 cactgcacatgcagagcaagatgcttttgctttctggtagagcacctttgcctatcaggg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cactgcacatgcagagcaagatgcttttgctttctggtagagcacctttgcctatcaggg 364

                                                                       
Query: 485 tatgatcacttagaacatacacaaggtaagaagaattcaaaggatatgaagctatgctaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tatgatcacttagaacatacacaaggtaagaagaattcaaaggatatgaagctatgctaa 304

                                                                       
Query: 545 gaagggtaatttttcttcattaagcttactttttggatgaatcaacttgaatgttaaggt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 303 gaagggtaatttttcttcattaagcttactttttggatgaatcaacttgaatgttaaggc 244

                                                  
Query: 605 actattatactgcaataagtttactggttttatagaaaa 643
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 243 actattatactgcaataagtttactggttttatagaaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)