GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGAATTGAA
TTGAATTGCATTGTAACCCCTATAAAAGCTGGGACGTGAGAGAGGGTTAA
AGCTTGGTAATGTGGAGCTGATGCTGATATGCAGAGGAAAGTTACAAATG
ATTGATTATGCAACTCTGCAAATGCAAGGATTTTTAAAGCTATTTCTAGC
TCAGTAAATCAAAAATAGCTTGCCAGATGTGATCCCTAATTTTCTATAGA
ATTCATAATTTTCTGTATGCATTTACGTATCAGAGAAAAGGAAATTTATG
CAGAGAATCACTCAGAAAATAGGAAGGACGTTTGACCCTCCCTTTCCTTC
TGTCCTTCATTATCTCAACAACTCCCTCCCTCCTCTCTTCTCTCCCTCTT
TTCCTACCTCCTTTCCTTCACTCAGTCCTCCTCTCCTCTCCTCTCCTCTC
CACTCCACTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTC
CTCTCCTCTCCTCTCTTCTCCTCTCCTCTCATTTCCTCTATTACTTTCAT
CTTATTCTCTTTTTATAACTTTTCCTTTTTCATTTTTTTCATTTCTTTTT
ATTCCTTTTCTTTCATTTCTTTTTTTTTTTTACCTTCCATTACCTTTCTC
TTTTATACTCTCTTTCCTTTTCCATATTTATTACTATTTTTTCATATTTT
CTTCCTATACTTCTACTTCCATTTATCAATCAATTTTACCACTATTTTTC
CATTACAATTTTTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTTAATAGGGTTATT
AGGTTCTCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATAAGATATTA
GCCCTCTATAGGATGTAGAATTGCTAAAGACCTTTTCCCAAAAAATTTGG
TTGCCTTTTTGTCTTATTGCCAGTGTCTTTTGTCTTGCTGAACTTTGCAA
TTTTATGAGGTCCCATTTGCCATTGGTGTTCTGTTCAGGAATTTTTTCTC
TCTGCTCATATGAACCAGGATCTTCCCCACTTTCTCCTCTATAACTTTCA
GTTCATCTAGTTTTATGTGGAGGTCCTTGATCCACTTGGATTTGAGCTTT
GTACAAGGAGATTGGAATTGATCGATTTGCATTCCTCTACATGCTAATTG
CCAGTTGAGCCAGCATTATTTGTTGAAAAGGATGTCTTTTTTCCACTGAA
TAGTTAGAGCTCCTTTGTTGCCGCAGACCTTCTGGATCCCTGTGTCTGCG
TGGAACGGGGTCTCTCAACATGGGTGGGCAAAGCGTGGATGAGCGACAAA
CAGACACACACACAGGAGAGTTCGTGTGGAATCTGAGTGTAATTTTACAA
CTCGAGCATCAGACTTTTTATGCAGAGGACAATAAGGAAGTTGGGTGACA
TATTCGCAAGGTACAATTGAGGTAACCGGAATCTTACATAAAACAGAGGA
ATGGCAACACAAN

Query= MSMg01no547_b08.b1 MSMg01no547_b08.b1 CHROMAT_FILE:
MSMg01no547_b08.b1 PHD_FILE: MSMg01no547_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:36 2005
         (412 letters)



>mm_chr9_4880935_4881746
          Length = 812

 Score =  756 bits (391), Expect = 0.0
 Identities = 403/407 (99%), Gaps = 2/407 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagaattgaattgaattgcattgtaacccctataaaagctgggacgtgagagagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattcagaattgaattgaattgcattgtaacccctataaaagctgggaagtgagagagg 264

                                                                       
Query: 65  gttaaagcttggtaatgtggagctgatgctgatatgcagaggaaagttacaaatgattga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttaaagcttggtaatgtggagctgatgctgatatgcagaggaaagttacaaatgattga 324

                                                                       
Query: 125 ttatgcaactctgcaaatgcaaggatttttaaagctatttctagctcagtaaatcaaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatgcaactctgcaaatgcaaggatttttaaagctatttctagctcagtaaatcaaaaa 384

                                                                       
Query: 185 tagcttgccagatgtgatccctaattttctatagaattcataattttctgtatgcattta 244
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 tagcttgccagatgtgatccctaattttctatagaattcataattttctgtatgaattta 444

                                                                       
Query: 245 cgtatcagagaaaaggaaatttatgcagagaatcactcagaaaataggaaggacgtttga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cgtatcagagaaaaggaaatttatgcagagaatcactcagaaaataggaaggacgtttga 504

                                                                       
Query: 305 ccctccctttccttctgtccttcattatctcaacaactccctccctcctctcttctctcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccctccctttccttctgtccttcattatctcaacaactccctccctcctctcttctctcc 564

                                                          
Query: 365 ctcttttcctacctcctttccttcactcagtcctcctctcctctcct 411
           ||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 565 ctcttttcctacctcctttccttcactcagtcctcct-tcct-tcct 609


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space:   323609
Effective search space used:   323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)