TACTATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCAGAGCCAGAAAAATGTCCTGACAAATTTAATAGAAACCCAA
GCTACCAGGTCCTAGTTGTACCACATGACACTCTGTATTTCATGTCAATA
TAACTAGGAAGTTCAACAACAGACCAAAACAGTGGCTCCACTTGTTAATT
ATCACTTAAACAAAACTTGAAGAGTGTAGTTTCTAGCATTTCAAAAATAT
TCCTCCCCTAACATCTTTTCCAAAATACTTACTTTCTCATTACCATAATC
TATTCTCCCTATGGTTATCTTTCCCACACAAATGTCTTTTAATAGCTGAA
TTTATATCTGTCAATTACTTATTTTATATAGGAGATGTAAAGTCCCGTCC
ATATAAAATTTTCAGTCTTTTCCACAATCAATTAATATACTTTATTAATC
ACTTTAAATTTTTTCACCTATGCATTGGCTTTTACTCCATTATGGACATT
GACTTATCTATAATATATTGATTGACTTATCATTATTAATGCTCATATTA
ATAAATTCATGGGTTGTGTCTTGTCTTCATCACATGTTCTATCTATATTT
TTTTTTATCAGTCTTTTCGCTAATAGGAAATAGGAATCTATGATATATAT
TTTATTATTTTTCTCATGTTTTTTTGATTATTTACTGTGAATCATGTGTA
TGTGAATTGCTTGATTTCGCTGACATTGTTTTTGTGTATTGGGGCGCGGC
TATAAATGTGCTTATATCTTTATTTTATTCCTACTTGTTACTTTTTATTG
TCTCTCTAN

ACGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTAGAGGAGAAATAAACAATGTCT
CCTGGGAGAAGGGGGTAGGCACAGAAGTCAGCATTGTGCTAGATTTGAGC
TGTAACCAGAAGACCTAGAAATTAGCAGCTCCCAGCCAGACTCACATTAA
CAGTGATATGGAGTGACCAGATTTTGGAGTATGTAATGGCCTTGACCTTG
GGAACACTGGCAGATGCTTAGGCAAACAGAAGCTAAAACAGCCCTGGTCA
GATGTTTTCATGTGCTGTATGTGAGTTAAGACCCTGGCTATCACCTACAA
AGGATAAAACAACAGAGAGGAGGAGCTGGGCTGTACCCTTATCCTGTTAG
TGATAAGGAGAAGAAAACCTCATCCTAGTGTTACCTGAGAAACAACCTAG
TGTATGAAAAGGAACCTTCTGCGGTTTGCTGCTGGAGCCACCACCCCTAC
CCCCACCCATTCTCACCTAACAAACCTGCACCCTTGTTTGTGCCCCCTGG
AGTCTTGGTAGGAATGGGTTTAAGTAACAAAACAAAACAAAGTTCCTCAG
GCCTGGCTTCCCTCAGGTGCAGAGCATCTGGAAGGGACATCAGCCTGCCC
ATATCTTTAGCCTTGTCAGCACACACACCCTTTATAAGGGACATAGCCAG
GGCTGCACAGAGAAAACCTTGTCTCATATAN

Query= MSMg01no548_i19.g1 MSMg01no548_i19.g1 CHROMAT_FILE:
MSMg01no548_i19.g1 PHD_FILE: MSMg01no548_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:30 2005
         (604 letters)



>mm_chr9_122111740_122112743
          Length = 1004

 Score = 1108 bits (573), Expect = 0.0
 Identities = 602/623 (96%), Gaps = 19/623 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttagaggagaaataaacaatgtctcctgggagaagggggtaggcacagaagtcagcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tttagaggagaaataaacaatgtctcctgggagaagggggtaggcacagaagtcagcatt 241

                                                                       
Query: 61  gtgctagatttgagc----tgtaaccagaagacctagaaattagcagctcccagccagac 116
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtgctagatttgagcatgctgtaaccagaagacctagaaattagcagctcccagccagac 301

                                                                       
Query: 117 tcacattaacagtgatatggagtgaccagattttggagtatgtaatggccttgaccttgg 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcacattaacagtgatatggagtgaccagattttggagtatgtaatggccttgaccttgg 361

                                                                       
Query: 177 gaacactggcagatgcttaggcaaacagaagctaaaacagccctggtcagatgttttcat 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaacactggcagatgcttaggcaaacagaagctaaaacagccctggtcagatgttttcat 421

                                                                       
Query: 237 gtgctgtatgtgagttaagaccctggctatcacctacaaaggataaaacaacagagagga 296
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 422 gtgctgtatgtgagttaagaccctggctatcacctacaaaggataaaacaacagtgagga 481

                                                                       
Query: 297 ggagctgggctgtacccttatcctgttagtgataaggagaagaaaacctcatcctagtgt 356
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 482 ggagctgggctgtacccttatcctgttagtgataaggagaaaaaaacctcatcctagtgt 541

                                                                       
Query: 357 tacctgagaaacaacctagtgtatgaaaaggaaccttctgcggtttgctgctggagccac 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tacctgagaaacaacctagtgtatgaaaaggaaccttctgcggtttgctgctggagccac 601

                                                                       
Query: 417 cacccctacccccacccattctcacctaacaaacctgcacccttgtttgtgccccctgga 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cacccctacccccacccattctcacctaacaaacctgcacccttgtttgtgccccctgga 661

                                                                       
Query: 477 gtcttggtaggaatgggtttaagtaacaaaacaaaacaaa---------------gttcc 521
           ||||||||||||||||||||||||||||||||||||||||               |||||
Sbjct: 662 gtcttggtaggaatgggtttaagtaacaaaacaaaacaaaacaaaacaaaacaaagttcc 721

                                                                       
Query: 522 tcaggcctggcttccctcaggtgcagagcatctggaagggacatcagcctgcccatatct 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tcaggcctggcttccctcaggtgcagagcatctggaagggacatcagcctgcccatatct 781

                                  
Query: 582 ttagccttgtcagcacacacacc 604
           |||||||||||||||||||||||
Sbjct: 782 ttagccttgtcagcacacacacc 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)