Name Type Link Xref Definition Chrm. Start (b.p.) End (b.p.) Orient to Chrm. Map View
Sequence Manipulation
1
source
taxon:10090
chromosome : 17
mol_type : genomic DNA
organism : Mus musculus
strain : C57BL/6J
17
1
95,272,651
plus
2
gap
estimated_length : 3000000
17
1
3,000,000
plus
3
gap
estimated_length : 55000
17
7,658,941
7,713,940
plus
4
gap
estimated_length : 50000
17
13,756,215
13,806,214
plus
5
LOC383196
gene
vega ensembl
GeneID:383196
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 80 Proteins
17
3,041,805
3,042,366
plus
6
LOC383196
mRNA
vega ensembl NCBI
GI:149268272
GeneID:383196
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 80 Proteins
product : hypothetical LOC383196
transcript_id : XM_001474081.1
17
3,041,805
3,042,366
plus
7
LOC383196
CDS
vega ensembl NCBI
GI:149268273
GeneID:383196
codon_start : 1
product : hypothetical protein
protein_id : XP_001474131.1
17
3,041,805
3,042,366
plus
8
LOC100040029
gene
vega ensembl
GeneID:100040029
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 153 ESTs, 9 Proteins
17
3,043,860
3,044,775
minus
9
LOC100040029
mRNA
vega ensembl NCBI
GI:149268268
GeneID:100040029
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 153 ESTs, 8 Proteins
product : similar to U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, transcript variant 1
transcript_id : XM_001474531.1
17
3,043,860
3,044,775
minus
10
LOC100040029
mRNA
vega ensembl NCBI
GI:149268270
GeneID:100040029
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 71 ESTs, 3 Proteins
product : similar to U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, transcript variant 2
transcript_id : XM_001474549.1
17
3,043,880
3,044,775
minus
11
LOC100040029
CDS
vega ensembl NCBI
GI:149268271
GeneID:100040029
codon_start : 1
product : hypothetical protein isoform 2
protein_id : XP_001474599.1
17
3,044,014
3,044,733
minus
12
LOC100040029
CDS
vega ensembl NCBI
GI:149268269
GeneID:100040029
codon_start : 1
product : hypothetical protein isoform 1
protein_id : XP_001474581.1
17
3,044,014
3,044,733
minus
13
LOC432993
gene
vega ensembl
GeneID:432993
note : synaptojanin 2 binding protein pseudogene
pseudo : _no_value
17
3,056,626
3,057,319
plus
14
D030013I16Rik
gene
vega ensembl MGI
GeneID:328734
MGI:3612472
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
pseudo : _no_value
17
3,064,318
3,084,042
minus
15
D030013I16Rik
misc_RNA
vega ensembl MGI NCBI
GI:149268265
GeneID:328734
MGI:3612472
note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product : RIKEN cDNA D030013I16 gene
pseudo : _no_value
transcript_id : XR_035109.1
17
3,064,318
3,084,042
minus
16
LOC100040128
gene
vega ensembl
GeneID:100040128
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs
17
3,082,301
3,084,402
minus
17
LOC100040128
mRNA
vega ensembl NCBI
GI:149268276
GeneID:100040128
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs
product : hypothetical protein LOC100040128
transcript_id : XM_001474127.1
17
3,082,301
3,084,402
minus
18
LOC100040128
CDS
vega ensembl NCBI
GI:149268277
GeneID:100040128
codon_start : 1
product : hypothetical protein
protein_id : XP_001474177.1
17
3,082,661
3,084,402
minus
19
1700024P12Rik
gene
vega ensembl MGI
GeneID:69392
MGI:1916642
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
17
3,083,924
3,084,986
plus
20
1700024P12Rik
mRNA
vega ensembl MGI NCBI
GI:94401547
GeneID:69392
MGI:1916642
note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST
product : RIKEN cDNA 1700024P12 gene
transcript_id : XM_898137.2
17
3,083,924
3,084,986
plus