README - About SNP list - There are two types of SNP list, [*.snp.tsv] and [*.snp2.tsv] (the asterisk [*] is an arbitrary strain name). SNPs located within 10 bp from the Indels were excluded in the [*.snp.tsv] files. SNPs located within 10 bp from the Indels were listed in the [*.snp2.tsv] files. It is recommended to use them as appropriate for the purpose under the user's discretion. - Description of each column - For SNP strain chromosome coordinates ref(mm10) variation For Insertion (ins) strain chromosome coordinates (start position) insert nucleotides size single read cover (-) or pair read cover (=) For Deletion(del) strain chromosome coordinates (start position) coordinates (start position) size single read cover (-) or pair read cover (=) MD5 (bfmv1.del.tsv) = ff83d7600cd2624d71d13e9912a81993 MD5 (bfmv1.ins.tsv) = 59574f0a205c9a65d0a43628c45330f3 MD5 (bfmv1.snp.tsv) = fd86395574ab494b8c3307221bf31d91 MD5 (bfmv1.snp2.tsv) = 631c1d0fe145941ecc8f15b479370218 MD5 (blg2v1.del.tsv) = 979c3ca82f0e779c79870c92e60b78c4 MD5 (blg2v1.ins.tsv) = 6e4fff4abee3ef851552ae97b28d0236 MD5 (blg2v1.snp.tsv) = 4ce8202eb2ee650f2b47640632be3f38 MD5 (blg2v1.snp2.tsv) = 23db6e294dfdee9764bf75f146a77359 MD5 (chdv1.del.tsv) = 45718510036be1f6efa06db97b8ad8af MD5 (chdv1.ins.tsv) = 2d0341b3141020445c4badbfd7c2205d MD5 (chdv1.snp.tsv) = 16701b743a131c1c3b5c58e634d7172c MD5 (chdv1.snp2.tsv) = fe55cf36474b89aeb45a302e1313cffe MD5 (hmiv1.del.tsv) = ac0d75285928ba1cfa8b333d4a5c5344 MD5 (hmiv1.ins.tsv) = d316417978cce123a7b8b7f7cc9ee63a MD5 (hmiv1.snp.tsv) = 935cf2414912e36812bd645a23bb32d5 MD5 (hmiv1.snp2.tsv) = e607908f90a9fa8789fe1bcdf801ca5e MD5 (jf1v3.del.tsv) = a9864c25dff719182b75239b76d7dd4a MD5 (jf1v3.ins.tsv) = faf92e651d77feb6298da9ee84c0a4e3 MD5 (jf1v3.snp.tsv) = a5865ca8b1554548f4c0ad24c219e516 MD5 (jf1v3.snp2.tsv) = 503a56a9a7e3352ed84bb239ae034e17 MD5 (kjrv1.del.tsv) = e394df9f8d4525712a23068b23453f65 MD5 (kjrv1.ins.tsv) = b5ad70e560b60c1c5366bce0d5dc1f5d MD5 (kjrv1.snp.tsv) = f98687c458302d2218ee9f119c46428c MD5 (kjrv1.snp2.tsv) = 542233902152a5857bbc8cb21540ec62 MD5 (msmv4.del.tsv) = 4930efb1e1954fe0a90bde8937bc7b8d MD5 (msmv4.ins.tsv) = b9a1ac9f9b38c2038fa909387349928f MD5 (msmv4.snp.tsv) = 8ca8d974d490a0e313ea75ed7acd2646 MD5 (msmv4.snp2.tsv) = 06257831ed99de61f413e27eb461a11a MD5 (njlv1.del.tsv) = 808a0db2bda8f4d6c2ed692a8061eca8 MD5 (njlv1.ins.tsv) = aad9dec65e650d68a2fae3ad53231d20 MD5 (njlv1.snp.tsv) = cc36e901f0f0846dfb778113fe9f4d9b MD5 (njlv1.snp2.tsv) = 45727909b8bba17cdf35ed2689ffdc28 MD5 (pgnv1.del.tsv) = 1aaca4865ec9a704805810158b1d9250 MD5 (pgnv1.ins.tsv) = f79a72c607dec8e9e578cd303533f0ca MD5 (pgnv1.snp.tsv) = 617fab9b25caf8e11adb62c7ee890bec MD5 (pgnv1.snp2.tsv) = 5f88da30056b064424796f0cde98d805 MD5 (swnv1.del.tsv) = ec46353fd9917d677adfab2296901e46 MD5 (swnv1.ins.tsv) = e581443be6e29edf58855bc47b45a5f4 MD5 (swnv1.snp.tsv) = ee7486a364d16e64c7a409b45ed7bcaa MD5 (swnv1.snp2.tsv) = 11e7be0eee818453d4bbfe1995e39890