MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Cp (ENSMUSG00000003617)

Cross Reference

CCDS	CCDS71227.1
EMBL	AC079442, CH466530
GO	GO:0004322, GO:0005507, GO:0005615, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name	Cp-002
OTTP	OTTMUSP00000027618
OTTT	OTTMUST00000057275
protein_id	EDL34883.1
RefSeq_mRNA	NM_001276250.1
RefSeq_mRNA_predicted	XM_006535381.2

RefSeq_peptide	NP_001263179
RefSeq_peptide_predicted	XP_006535444.1
UCSC	uc008osc.2
UniParc	UPI000024D8E7
Uniprot/SPTREMBL	G3X8Q5
Vega_transcript	Cp-002, OTTMUST00000057275
Vega_translation	186684, OTTMUSP00000027618

Definition

protein_id:ENSMUSP00000003714
translation:

MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGP
DRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFH
AHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHS
HVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCS
EPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHG
QALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPS
PEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYK
KMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVS
FTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPT
KDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQ
VDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYL
SKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFT
VYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQ
FTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTV
VPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVK
VFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMF
GNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTL
EMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQ
MSTKE

Chromosome

Length
Position(start - end)

48273
19957284 - 20005558

Orient to Chromosome

plus

Link

Location : (3:19957284-20005558)
/

Detail Map

name	Cp (ENSMUSG00000003617)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Cp note : ceruloplasmin [Source:MGI Symbol;Acc:MGI:88476]

name	Hps3 (ENSMUSG00000027615)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Hps3 note : Hermansky-Pudlak syndrome 3 homolog (human) [Source:MGI Symbol;Acc:MGI:2153839]

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000091309

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000108329

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000003714

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000108328

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000108325

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000172605

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173848

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000172860

name	Cp (ENSMUSG00000003617)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000173779

name	Hps3 (ENSMUSG00000027615)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000012580

name	Hps3 (ENSMUSG00000027615)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000108321

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS38401.1 Uniprot/SWISSPROT:Q61147 RefSeq_peptide:NP_031778 RefSeq_mRNA:NM_007752.3 Vega_transcript:Cp-001 Vega_transcript:OTTMUST00000057274 UCSC:uc008orz.2 EMBL:BC062957 EMBL:U49430 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-001 Vega_translation:186683 Vega_translation:OTTMUSP00000027617 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAB07996.1 protein_id:AAH62957.1 OTTP:OTTMUSP00000027617 OTTT:OTTMUST00000057274 Reactome:R-MMU-382551 Reactome:R-MMU-425366 Reactome:R-MMU-425407 Reactome:R-MMU-425410 Reactome:R-MMU-917937 UniParc:UPI0000225E55
definition	note : transcript_id=ENSMUST00000091309 protein_id : ENSMUSP00000088857 translation : MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGPDRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFHAHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHSHVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCSEPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHGQALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPSPEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYKKMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVSFTAENEGTYYGPPGRSSQQAASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPTKDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYLSKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQETKSG

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_011247957.1 Uniprot/SPTREMBL:E9PZD8 UCSC:uc008osb.1 EMBL:AC079442 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 UniParc:UPI00005659F3
definition	note : transcript_id=ENSMUST00000108329 protein_id : ENSMUSP00000103965 translation : MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGPDRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFHAHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHSHVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCSEPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHGQALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPSPEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYKKMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVSFTAENEGTYYGPPGRSSQQAASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPTKDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYLSKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQMSTKE

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS71227.1 RefSeq_peptide:NP_001263179 RefSeq_mRNA:NM_001276250.1 RefSeq_mRNA_predicted:XM_006535381.2 RefSeq_peptide_predicted:XP_006535444.1 Vega_transcript:Cp-002 Vega_transcript:OTTMUST00000057275 Uniprot/SPTREMBL:G3X8Q5 UCSC:uc008osc.2 EMBL:AC079442 EMBL:CH466530 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-002 Vega_translation:186684 Vega_translation:OTTMUSP00000027618 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL34883.1 OTTP:OTTMUSP00000027618 OTTT:OTTMUST00000057275 UniParc:UPI000024D8E7
definition	note : transcript_id=ENSMUST00000003714 protein_id : ENSMUSP00000003714 translation : MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGPDRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFHAHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHSHVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCSEPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHGQALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPSPEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYKKMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVSFTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPTKDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYLSKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQMSTKE

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS71227.1 RefSeq_peptide:NP_001263177 RefSeq_mRNA:NM_001276248.1 Vega_transcript:Cp-003 Vega_transcript:OTTMUST00000057276 Uniprot/SPTREMBL:G3X8Q5 UCSC:uc008osb.1 EMBL:AC079442 EMBL:CH466530 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005615 GO:GO:0005765 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0070062 GO:GO:0072562 GO:GO:0072562 MGI_trans_name:Cp-003 Vega_translation:186685 Vega_translation:OTTMUSP00000027619 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL34883.1 OTTP:OTTMUSP00000027619 OTTT:OTTMUST00000057276 UniParc:UPI000024D8E7
definition	note : transcript_id=ENSMUST00000108328 protein_id : ENSMUSP00000103964 translation : MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGPDRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFHAHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHSHVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCSEPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHGQALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPSPEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYKKMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVSFTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPTKDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYLSKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQMSTKE

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cp-007 Vega_transcript:OTTMUST00000057343 Uniprot/SPTREMBL:G3X9T8 UCSC:uc008orz.2 EMBL:AC079442 EMBL:CH466530 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-007 Vega_translation:186686 Vega_translation:OTTMUSP00000027652 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:EDL34888.1 OTTP:OTTMUSP00000027652 OTTT:OTTMUST00000057343 UniParc:UPI00001F05E5
definition	note : transcript_id=ENSMUST00000108325 protein_id : ENSMUSP00000103961 translation : MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGPDRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFHAHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHSHVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCSEPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHGQALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPSPEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYKKMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVSFTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPTKDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQVDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYLSKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQETKSG

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cp-014 Vega_transcript:OTTMUST00000094864 Uniprot/SPTREMBL:G3UZ53 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-014 Vega_translation:186687 Vega_translation:OTTMUSP00000052874 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052874 OTTT:OTTMUST00000094864 UniParc:UPI00021CF6CA
definition	codon_start : 2 note : transcript_id=ENSMUST00000172605 protein_id : ENSMUSP00000134347 translation : XTGGMKQKYTVNQCQRQFEDFTVYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQK

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cp-013 Vega_transcript:OTTMUST00000094865 Uniprot/SPTREMBL:G3UXG1 EMBL:AC079442 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-013 Vega_translation:186688 Vega_translation:OTTMUSP00000052875 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052875 OTTT:OTTMUST00000094865 UniParc:UPI00021CF6CB
definition	note : transcript_id=ENSMUST00000173848 protein_id : ENSMUSP00000133676 translation : GSKYKKVVYRQFTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTVVPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKVNFKPSLL

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cp-012 Vega_transcript:OTTMUST00000094866 Uniprot/SPTREMBL:G3UWP5 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0006825 GO:GO:0006879 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-012 Vega_translation:186689 Vega_translation:OTTMUSP00000052876 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0042592 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052876 OTTT:OTTMUST00000094866 UniParc:UPI00021CF6CC
definition	codon_start : 2 note : transcript_id=ENSMUST00000172860 protein_id : ENSMUSP00000133374 translation : XEDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVKVFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMFGNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTLEMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQGKSR

name	Cp (ENSMUSG00000003617) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cp-011 Vega_transcript:OTTMUST00000094861 Uniprot/SPTREMBL:G3UXD2 EMBL:AC079442 GO:GO:0004322 GO:GO:0005507 GO:GO:0005615 GO:GO:0005765 GO:GO:0051087 GO:GO:0055114 GO:GO:0070062 GO:GO:0072562 MGI_trans_name:Cp-011 Vega_translation:186690 Vega_translation:OTTMUSP00000052872 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005615 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005764 goslim_goa:GO:0005773 goslim_goa:GO:0008150 goslim_goa:GO:0016491 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000052872 OTTT:OTTMUST00000094861 UniParc:UPI00021CF6CD
definition	note : transcript_id=ENSMUST00000173779 protein_id : ENSMUSP00000133643 translation : CHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQMSTKE

name	Hps3 (ENSMUSG00000027615) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS17260.1 Uniprot/SWISSPROT:Q91VB4 RefSeq_peptide:NP_542365 RefSeq_mRNA:NM_080634.4 Vega_transcript:Hps3-001 Vega_transcript:OTTMUST00000057229 UCSC:uc008osf.2 EMBL:AF393747 EMBL:AF393780 EMBL:AF396632 EMBL:AF396633 EMBL:AF396634 EMBL:AF396635 EMBL:AF396636 EMBL:AF396637 EMBL:AF396638 EMBL:AF396639 EMBL:AF396640 EMBL:AF396641 EMBL:AF396642 EMBL:AF396643 EMBL:AF396644 EMBL:AF396645 EMBL:AF396646 EMBL:AF396647 EMBL:AF396648 EMBL:AF396700 EMBL:AF396701 EMBL:AF396702 EMBL:AF396703 EMBL:BC020105 EMBL:BC058235 EMBL:CH466530 GO:GO:0005737 GO:GO:0006996 GO:GO:0031084 GO:GO:0031084 GO:GO:0043473 MGI_trans_name:Hps3-001 Vega_translation:186691 Vega_translation:OTTMUSP00000027592 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005829 goslim_goa:GO:0008150 goslim_goa:GO:0043234 goslim_goa:GO:0043473 protein_id:AAH20105.1 protein_id:AAH58235.1 protein_id:AAK84181.1 protein_id:AAK84214.1 protein_id:AAL37710.1 protein_id:AAL84109.1 protein_id:EDL34889.1 OTTP:OTTMUSP00000027592 OTTT:OTTMUST00000057229 UniParc:UPI000002125A
definition	note : transcript_id=ENSMUST00000012580 protein_id : ENSMUSP00000012580 translation : MVRLYNLHPFGSQQVVPCQWEPEQVCCGGSDALFVAAGCKVEAFAVQGEELCRQRCAFSTLGRVLRMAYSEAGDYLVAIEEKNKTIFLRAYVNWRSKRSDNSRVCIRMVGHNVEASFCESFRDQMSIIEMPMSEAPLCFSCCPVKGDLLVGCTNKLVLFTLKYDIINEEFSILNFERSLIIHIDNITPVEISFCVGYVAVMSDLEVLLLKLESDPIHGESVDHHPQETSNPLKEAEGVSNETSQLESEDFVICLKPMELIGEKCEQSGISVKLESTGLEDEKVKYLRVRHLLYRRFAPDISSYVLSDNIKLHSLQLLPIHQSGFHPDENDLSPKKEMPNLFCFFSLPHVGYLYMVVKSVELMSVYWYPEKSQQAVLTPQFLHVITSQSLQCFTVRCSAAVAHEEDLYMDTTLKACPPVSMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRESPKKLISRKDASVRSGTPHVAEAAWNLYLVNTTAPVQLYKEMVDYSNSYKTVKTESCLHLLSEAHLLVRAALMDGSQLEPAEKAELLEAFKESCGHLGDCYSRLTTEQSHLALPYYKMSGLSLAEVLARVDWTEESESQKYERGLVFYINHSLYENLDEELSKELAAKVAQIFHMAEPKQLPHVLSSPSMKNIDPLTALHYLRKLDSCGVSPVLVTLTKAAVALKMGDLDMYRNEMKSHSEMKLVYGFILEPRLLIQQWKGQIVPTELAIDLKETQPGLLVASVLGLQKNDKIGIVETDSFFKVLCGKDEDAVPQLLIDFWEAQLVACLPNVVLEELFFKLISQYVWRLSERRCPDTVPLRTAEDLINACSHYGLVNPWVHVLTTSDSLADKNYTDDLLKLQSLICSPSLDVASIIPFLEPLSEDTVAGLSTHALCHTRLQEYEQCIDTLLERCPEAVIAYANQELKEDHWILWWKKLLPELCQRVKSGGERSHLHLSLLKETLSVIAVGLDLRDFLNVLPEDGAAAFFLPYLLFCSRKKSLT

name	Hps3 (ENSMUSG00000027615) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS50872.1 RefSeq_peptide:NP_001139795 RefSeq_mRNA:NM_001146323.1 Vega_transcript:Hps3-004 Vega_transcript:OTTMUST00000057232 Uniprot/SPTREMBL:E9PZY1 UCSC:uc008osg.2 EMBL:AC079442 GO:GO:0005737 GO:GO:0006996 GO:GO:0031084 GO:GO:0043473 MGI_trans_name:Hps3-004 Vega_translation:186692 Vega_translation:OTTMUSP00000027593 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005829 goslim_goa:GO:0008150 goslim_goa:GO:0043234 goslim_goa:GO:0043473 OTTP:OTTMUSP00000027593 OTTT:OTTMUST00000057232 UniParc:UPI0000F4DC58
definition	note : transcript_id=ENSMUST00000108321 protein_id : ENSMUSP00000103957 translation : MVRLYNLHPFGSQQVVPCQWEPEQVCCGGSDALFVAAGCKVEAFAVQGEELCRQRCAFSTLGRVLRMAYSEAEVLLLKLESDPIHGESVDHHPQETSNPLKEAEGVSNETSQLESEDFVICLKPMELIGEKCEQSGISVKLESTGLEDEKVKYLRVRHLLYRRFAPDISSYVLSDNIKLHSLQLLPIHQSGFHPDENDLSPKKEMPNLFCFFSLPHVGYLYMVVKSVELMSVYWYPEKSQQAVLTPQFLHVITSQSLQCFTVRCSAAVAHEEDLYMDTTLKACPPVSMDVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRESPKKLISRKDASVRSGTPHVAEAAWNLYLVNTTAPVQLYKEMVDYSNSYKTVKTESCLHLLSEAHLLVRAALMDGSQLEPAEKAELLEAFKESCGHLGDCYSRLTTEQSHLALPYYKMSGLSLAEVLARVDWTEESESQKYERGLVFYINHSLYENLDEELSKELAAKVAQIFHMAEPKQLPHVLSSPSMKNIDPLTALHYLRKLDSCGVSPVLVTLTKAAVALKMGDLDMYRNEMKSHSEMKLVYGFILEPRLLIQQWKGQIVPTELAIDLKETQPGLLVASVLGLQKNDKIGIVETDSFFKVLCGKDEDAVPQLLIDFWEAQLVACLPNVVLEELFFKLISQYVWRLSERRCPDTVPLRTAEDLINACSHYGLVNPWVHVLTTSDSLADKNYTDDLLKLQSLICSPSLDVASIIPFLEPLSEDTVAGLSTHALCHTRLQEYEQCIDTLLERCPEAVIAYANQELKEDHWILWWKKLLPELCQRVKSGGERSHLHLSLLKETLSVIAVGLDLRDFLNVLPEDGAAAFFLPYLLFCSRKKSLT

name
type	STS
link
xref	UniSTS_NUM:141386 UniSTS:Cp
definition	note : map_weight=1 standard_name : Cp

name
type	misc_feature
link
xref
definition	note : contig AC079442.24 1..167709(-1)

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057278 Vega_transcript:OTTMUST00000057278 MGI_trans_name:Cp-005 OTTT:OTTMUST00000057278
definition	note : retained_intron note : transcript_id=ENSMUST00000128615

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057277 Vega_transcript:OTTMUST00000057277 MGI_trans_name:Cp-004 OTTT:OTTMUST00000057277
definition	note : retained_intron note : transcript_id=ENSMUST00000131454

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057279 Vega_transcript:OTTMUST00000057279 MGI_trans_name:Cp-006 OTTT:OTTMUST00000057279
definition	note : retained_intron note : transcript_id=ENSMUST00000150264

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000094863 Vega_transcript:OTTMUST00000094863 MGI_trans_name:Cp-015 OTTT:OTTMUST00000094863
definition	note : retained_intron note : transcript_id=ENSMUST00000174803

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057344 Vega_transcript:OTTMUST00000057344 MGI_trans_name:Cp-008 OTTT:OTTMUST00000057344
definition	note : retained_intron note : transcript_id=ENSMUST00000125994

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057345 Vega_transcript:OTTMUST00000057345 MGI_trans_name:Cp-009 OTTT:OTTMUST00000057345
definition	note : retained_intron note : transcript_id=ENSMUST00000131811

name	Cp (ENSMUSG00000003617)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057346 Vega_transcript:OTTMUST00000057346 MGI_trans_name:Cp-010 OTTT:OTTMUST00000057346
definition	note : retained_intron note : transcript_id=ENSMUST00000129135

name	Hps3 (ENSMUSG00000027615)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057235 Vega_transcript:OTTMUST00000057235 MGI_trans_name:Hps3-007 OTTT:OTTMUST00000057235
definition	note : retained_intron note : transcript_id=ENSMUST00000130171

name	Hps3 (ENSMUSG00000027615)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057237 Vega_transcript:OTTMUST00000057237 UCSC:uc008ose.2 MGI_trans_name:Hps3-009 OTTT:OTTMUST00000057237
definition	note : processed_transcript note : transcript_id=ENSMUST00000141308

name	Hps3 (ENSMUSG00000027615)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057238 Vega_transcript:OTTMUST00000057238 UCSC:uc008ose.2 MGI_trans_name:Hps3-010 OTTT:OTTMUST00000057238
definition	note : processed_transcript note : transcript_id=ENSMUST00000139446

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cp (ENSMUSG00000003617)
Transcript ID	ENSMUST00000003714

Reports
substitution
cSNPs	15
Insertion	42
Deletion	61
SNPs	-1kb 19952135(c.-5149C>T), 19952154(c.-5130T>C), 19952212(c.-5072T>G), 19952229(c.-5055C>T), 19952266(c.-5018G>A), 19952329(c.-4955A>G), 19952350(c.-4934A>G), 19952431(c.-4853A>G), 19952461(c.-4823C>T), 19952517(c.-4767A>G), 19952527(c.-4757G>A), 19952557(c.-4727G>A), 19952563(c.-4721C>T), 19952580(c.-4704C>A), 19952655(c.-4629G>T), 19952786(c.-4498G>A), 19952790(c.-4494T>G), 19952834(c.-4450A>G), 19952867(c.-4417C>T), 19952892(c.-4392G>A), 19953142(c.-4142C>T), 19953171(c.-4113A>G), 19953253(c.-4031C>T), 19953473(c.-3811T>A), 19953537(c.-3747C>T), 19953549(c.-3735A>G), 19953637(c.-3647C>T), 19953640(c.-3644C>T), 19953851(c.-3433T>A), 19953969(c.-3315C>T), 19954082(c.-3202T>C), 19954422(c.-2862T>C), 19954537(c.-2747A>G), 19954554(c.-2730A>G), 19954566(c.-2718A>G), 19954650(c.-2634G>C), 19954708(c.-2576G>A), 19954759(c.-2525G>T), 19954849(c.-2435A>G), 19954989(c.-2295T>C), 19955235(c.-2049G>A), 19955236(c.-2048C>T), 19955245(c.-2039G>A), 19955288(c.-1996A>C), 19955289(c.-1995A>C), 19955290(c.-1994G>A), 19955342(c.-1942C>T), 19955357(c.-1927C>T), 19955391(c.-1893T>C), 19955538(c.-1746A>G), 19955647(c.-1637A>G), 19955715(c.-1569A>G), 19955794(c.-1490G>T), 19955869(c.-1415C>T), 19955875(c.-1409G>A), 19955953(c.-1331G>A), 19955961(c.-1323C>T), 19956131(c.-1153T>C), 19956702(c.-582T>C), 5'UTR CDS 19957361(c.78T>C), 19968162(c.727G>C), 19969810(c.813G>C), 19971066(c.1188T>C), 19974923(c.1560A>G), 19975046(c.1683T>A), 19977110(c.1710A>G), 19978870(c.1857G>A), 19978921(c.1908C>T), 19982044(c.2349C>T), 19983394(c.2409G>T), 19987423(c.2708G>A), 19988018(c.2946C>T), 19988051(c.2979C>T), 19989110(c.3058C>T), 3'UTR 20008557(c.31C>G), 20008640(c.114C>T), 20008731(c.205A>C), 20008769(c.243T>G), 20008803(c.277A>G), 20008964(c.438G>C), 20009006(c.480C>T), 20009058(c.532C>T), INTRON 19957523(c.146+94T>C), 19958505(c.146+1076A>G), 19958814(c.146+1385C>T), 19958824(c.146+1395C>T), 19959519(c.146+2090A>G), 19959570(c.146+2141A>G), 19959841(c.146+2412C>T), 19959897(c.146+2468T>G), 19960255(c.146+2826A>G), 19960313(c.146+2884C>A), 19960351(c.146+2922C>T), 19960544(c.146+3115G>A), 19960569(c.146+3140C>A), 19960687(c.146+3258T>A), 19960694(c.146+3265C>T), 19960731(c.146+3302T>C), 19960760(c.146+3331G>C), 19960824(c.146+3395C>T), 19960839(c.146+3410G>T), 19960997(c.147-3283A>G), 19961027(c.147-3253A>G), 19961028(c.147-3252C>T), 19961039(c.147-3241A>G), 19961102(c.147-3178A>C), 19961209(c.147-3071T>G), 19961370(c.147-2910C>A), 19961373(c.147-2907A>T), 19961381(c.147-2899A>G), 19961420(c.147-2860G>A), 19961590(c.147-2690T>C), 19961815(c.147-2465T>A), 19961817(c.147-2463G>A), 19961846(c.147-2434C>T), 19961990(c.147-2290A>G), 19962035(c.147-2245T>A), 19962048(c.147-2232C>T), 19962121(c.147-2159A>C), 19962133(c.147-2147T>C), 19962143(c.147-2137T>C), 19962146(c.147-2134T>G), 19962184(c.147-2096T>C), 19962212(c.147-2068G>T), 19962385(c.147-1895C>A), 19962652(c.147-1628G>A), 19962719(c.147-1561T>C), 19962781(c.147-1499T>C), 19962820(c.147-1460T>C), 19962902(c.147-1378G>A), 19962975(c.147-1305C>G), 19963068(c.147-1212A>G), 19963129(c.147-1151T>C), 19963176(c.147-1104G>A), 19963206(c.147-1074A>G), 19963216(c.147-1064A>G), 19963294(c.147-986C>T), 19963957(c.147-323G>A), 19963996(c.147-284C>T), 19964012(c.147-268A>C), 19964021(c.147-259C>G), 19964086(c.147-194T>G), 19964134(c.147-146A>G), 19964146(c.147-134A>G), 19964175(c.147-105C>T), 19964183(c.147-97T>C), 19964189(c.147-91A>G), 19964233(c.147-47A>G), 19964550(c.394+23C>T), 19964595(c.394+68C>T), 19964627(c.394+100C>G), 19964644(c.394+117A>G), 19964674(c.394+147T>A), 19964798(c.394+271A>G), 19964842(c.394+315G>A), 19965016(c.394+489C>T), 19965091(c.394+564T>C), 19965098(c.394+571G>C), 19965307(c.394+780C>A), 19965331(c.394+804G>A), 19965346(c.394+819C>T), 19965387(c.395-852G>A), 19965399(c.395-840A>T), 19965507(c.395-732G>A), 19965514(c.395-725T>C), 19965515(c.395-724C>G), 19965651(c.395-588C>T), 19965820(c.395-419T>G), 19965926(c.395-313T>C), 19965949(c.395-290A>C), 19966051(c.395-188T>C), 19966165(c.395-74G>A), 19966456(c.604+8C>T), 19967638(c.605-402A>C), 19967859(c.605-181C>T), 19967861(c.605-179C>G), 19967866(c.605-174A>C), 19967926(c.605-114T>C), 19968329(c.778+116C>A), 19968345(c.778+132T>C), 19968388(c.778+175G>A), 19968390(c.778+177T>C), 19968475(c.778+262G>C), 19968520(c.778+307T>C), 19968759(c.778+546G>A), 19968805(c.778+592A>G), 19968848(c.778+635C>T), 19968911(c.778+698T>C), 19968947(c.778+734A>G), 19969031(c.779-745G>T), 19969088(c.779-688C>A), 19969107(c.779-669A>G), 19969141(c.779-635C>T), 19969179(c.779-597G>A), 19969261(c.779-515C>A), 19969665(c.779-111T>C), 19970093(c.1033+63A>G), 19970141(c.1033+111G>A), 19970200(c.1033+170C>T), 19970217(c.1033+187A>C), 19970358(c.1033+328T>C), 19970407(c.1033+377T>A), 19970542(c.1034-370T>G), 19970617(c.1034-295A>C), 19970643(c.1034-269G>A), 19970648(c.1034-264C>T), 19970704(c.1034-208C>T), 19970748(c.1034-164C>A), 19971156(c.1205+73C>T), 19971191(c.1205+108C>T), 19971243(c.1205+160T>A), 19971299(c.1205+216T>C), 19971305(c.1205+222C>T), 19971410(c.1205+327A>G), 19971452(c.1205+369T>C), 19971786(c.1205+703G>T), 19971814(c.1205+731T>C), 19971826(c.1205+743G>C), 19971878(c.1206-737T>C), 19971925(c.1206-690T>C), 19971931(c.1206-684C>T), 19971989(c.1206-626A>G), 19972226(c.1206-389T>C), 19972255(c.1206-360T>C), 19972333(c.1206-282C>T), 19972367(c.1206-248C>G), 19972388(c.1206-227C>T), 19972581(c.1206-34C>T), 19972900(c.1345+146T>G), 19972917(c.1345+163C>T), 19972939(c.1345+185C>T), 19972978(c.1345+224G>A), 19973172(c.1345+418T>G), 19973237(c.1345+483T>C), 19973506(c.1346-271G>A), 19973704(c.1346-73G>A), 19973742(c.1346-35C>T), 19973743(c.1346-34A>G), 19974570(c.1499-292A>G), 19974685(c.1499-177G>A), 19974816(c.1499-46A>G), 19974849(c.1499-13C>T), 19975090(c.1695+32G>A), 19975147(c.1695+89G>A), 19975148(c.1695+90G>T), 19975175(c.1695+117C>T), 19975229(c.1695+171C>T), 19975246(c.1695+188T>A), 19975265(c.1695+207G>T), 19975269(c.1695+211A>G), 19975291(c.1695+233T>A), 19975426(c.1695+368T>C), 19975434(c.1695+376G>T), 19975509(c.1695+451G>T), 19975551(c.1695+493C>T), 19975603(c.1695+545C>G), 19975638(c.1695+580C>G), 19975683(c.1695+625A>G), 19975685(c.1695+627G>A), 19975723(c.1695+665A>G), 19975772(c.1695+714A>G), 19975905(c.1695+847G>A), 19976036(c.1695+978T>C), 19976094(c.1696-1002A>G), 19976167(c.1696-929G>A), 19976171(c.1696-925T>C), 19976174(c.1696-922T>C), 19976204(c.1696-892A>G), 19976205(c.1696-891C>A), 19976228(c.1696-868G>A), 19976278(c.1696-818A>G), 19976491(c.1696-605G>A), 19976812(c.1696-284A>G), 19976816(c.1696-280T>C), 19976817(c.1696-279A>G), 19976835(c.1696-261A>G), 19976876(c.1696-220G>A), 19976911(c.1696-185C>A), 19976970(c.1696-126C>T), 19976994(c.1696-102T>G), 19976998(c.1696-98T>C), 19977048(c.1696-48C>T), 19977065(c.1696-31A>G), 19977288(c.1846+42G>T), 19977424(c.1846+178A>G), 19977464(c.1846+218C>A), 19977480(c.1846+234G>T), 19977554(c.1846+308G>C), 19977588(c.1846+342C>T), 19977684(c.1846+438T>A), 19977759(c.1846+513G>A), 19978337(c.1847-523C>A), 19978584(c.1847-276C>T), 19978658(c.1847-202A>G), 19978841(c.1847-19C>A), 19979085(c.2059+13T>C), 19979108(c.2059+36C>T), 19979149(c.2059+77G>A), 19979251(c.2059+179T>A), 19979264(c.2059+192G>A), 19979636(c.2059+564C>T), 19979653(c.2059+581G>A), 19979675(c.2059+603T>A), 19979819(c.2059+747C>T), 19980355(c.2060-236C>T), 19980375(c.2060-216A>G), 19980836(c.2267+38C>A), 19980887(c.2267+89G>A), 19980903(c.2267+105G>T), 19980954(c.2267+156C>T), 19981226(c.2267+428C>A), 19981437(c.2268-526A>G), 19981438(c.2268-525C>G), 19981473(c.2268-490T>C), 19981511(c.2268-452G>A), 19981790(c.2268-173G>A), 19982150(c.2407+48T>C), 19982163(c.2407+61G>A), 19982228(c.2407+126G>C), 19982229(c.2407+127A>G), 19982234(c.2407+132G>A), 19982256(c.2407+154G>T), 19982372(c.2407+270C>T), 19982374(c.2407+272G>A), 19982398(c.2407+296C>A), 19982475(c.2407+373C>T), 19982497(c.2407+395C>A), 19982589(c.2407+487G>A), 19982593(c.2407+491C>T), 19982796(c.2408-597A>T), 19983271(c.2408-122A>G), 19983640(c.2536+119G>A), 19983648(c.2536+127C>T), 19983667(c.2536+146G>A), 19983684(c.2536+163C>G), 19983688(c.2536+167G>C), 19983793(c.2536+272C>T), 19983827(c.2536+306C>T), 19983837(c.2536+316A>T), 19983969(c.2536+448G>A), 19984076(c.2536+555T>C), 19984210(c.2536+689T>C), 19984280(c.2536+759T>A), 19984295(c.2536+774G>A), 19984351(c.2536+830G>A), 19984557(c.2537-1003C>A), 19984605(c.2537-955C>A), 19984872(c.2537-688A>C), 19984877(c.2537-683G>A), 19984981(c.2537-579C>G), 19985081(c.2537-479C>T), 19985397(c.2537-163T>C), 19985426(c.2537-134T>G), 19985453(c.2537-107C>T), 19986087(c.2643+421C>G), 19986329(c.2643+663T>C), 19986564(c.2644-795A>T), 19986695(c.2644-664T>C), 19986728(c.2644-631A>G), 19986946(c.2644-413C>A), 19987648(c.2860+73A>C), 19987717(c.2860+142T>C), 19987726(c.2860+151A>T), 19987766(c.2861-167T>C), 19987819(c.2861-114A>G), 19988172(c.3000+100C>T), 19988197(c.3000+125C>T), 19988273(c.3000+201C>T), 19988284(c.3000+212G>A), 19988299(c.3000+227T>G), 19988778(c.3001-275C>T), 19988881(c.3001-172T>C), 19988911(c.3001-142C>T), 19988915(c.3001-138G>A), 19988971(c.3001-82T>A), 19988997(c.3001-56T>C), 19989326(c.3166+108C>T), 19989388(c.3166+170T>C), 19989394(c.3166+176C>T), 19989461(c.3166+243A>G), 19989506(c.3166+288A>G), 19989544(c.3166+326A>T), 19989570(c.3166+352T>C), 19989578(c.3166+360C>T), 19989647(c.3166+429G>A), 19989667(c.3166+449G>A), 19989690(c.3166+472T>C), 19989792(c.3166+574C>T), 19989934(c.3166+716T>C), 19989938(c.3166+720A>C), 19990055(c.3166+837C>T), 19990069(c.3166+851A>G), 19990403(c.3166+1185C>T), 19990787(c.3166+1569G>A), 19990802(c.3166+1584T>A), 19991313(c.3166+2095C>T), 19991404(c.3166+2186G>C), 19991411(c.3166+2193C>T), 19991603(c.3166+2385C>T), 19991650(c.3166+2432C>A), 19991653(c.3166+2435G>A), 19991698(c.3166+2480C>T), 19991699(c.3166+2481G>A), 19991748(c.3166+2530A>C), 19991752(c.3166+2534C>T), 19991762(c.3166+2544T>A), 19991774(c.3166+2556G>A), 19992085(c.3166+2867A>G), 19992132(c.3166+2914G>C), 19992170(c.3166+2952C>A), 19992184(c.3166+2966G>A), 19992211(c.3166+2993A>G), 19992214(c.3166+2996A>G), 19992219(c.3166+3001A>G), 19992246(c.3166+3028A>T), 19992250(c.3166+3032A>G), 19992290(c.3166+3072A>G), 19992292(c.3166+3074T>A), 19992403(c.3166+3185A>C), 19992485(c.3166+3267C>A), 19992630(c.3166+3412C>T), 19992929(c.3166+3711T>C), 19993032(c.3166+3814C>G), 19993127(c.3166+3909G>A), 19993189(c.3166+3971A>T), 19993304(c.3166+4086T>A), 19993356(c.3166+4138T>A), 19993372(c.3166+4154T>A), 19993429(c.3166+4211G>T), 19993472(c.3166+4254A>C), 19993497(c.3166+4279G>T), 19993523(c.3166+4305C>A), 19993597(c.3166+4379C>T), 19993599(c.3166+4381G>C), 19994981(c.3166+5763C>T), 19994990(c.3166+5772T>G), 19994995(c.3166+5777A>C), 19995002(c.3166+5784G>T), 19995073(c.3166+5855C>T), 19995076(c.3166+5858C>T), 19995087(c.3166+5869G>A), 19995111(c.3166+5893G>T), 19995331(c.3166+6113A>T), 19995356(c.3166+6138A>C), 19995361(c.3166+6143G>C), 19995514(c.3166+6296G>A), 19995685(c.3166+6467A>G), 19995694(c.3166+6476A>G), 19995716(c.3166+6498T>G), 19996477(c.3166+7259G>A), 19996661(c.3166+7443G>A), 19996812(c.3166+7594G>A), 19997050(c.3166+7832T>C), 19997118(c.3166+7900G>A), 19997177(c.3166+7959C>T), 19997181(c.3166+7963A>T), 19997184(c.3166+7966T>C), 19997185(c.3166+7967G>A), 19997238(c.3166+8020C>G), 19997250(c.3166+8032G>A), 19997348(c.3167-8119A>G), 19997413(c.3167-8054T>C), 19997726(c.3167-7741T>C), 19998412(c.3167-7055G>T), 19998420(c.3167-7047A>G), 19998647(c.3167-6820C>T), 19998657(c.3167-6810C>T), 19998699(c.3167-6768T>C), 19999032(c.3167-6435T>C), 19999189(c.3167-6278T>C), 19999316(c.3167-6151G>A), 19999412(c.3167-6055T>C), 19999666(c.3167-5801G>A), 19999740(c.3167-5727T>C), 20000330(c.3167-5137A>T), 20000366(c.3167-5101T>C), 20000384(c.3167-5083G>A), 20000769(c.3167-4698G>A), 20000923(c.3167-4544A>C), 20000954(c.3167-4513G>A), 20000997(c.3167-4470A>G), 20001017(c.3167-4450A>G), 20001048(c.3167-4419C>T), 20001068(c.3167-4399G>T), 20001159(c.3167-4308C>G), 20001160(c.3167-4307G>A), 20001166(c.3167-4301C>T), 20001167(c.3167-4300A>G), 20001168(c.3167-4299T>C), 20001180(c.3167-4287C>T), 20001182(c.3167-4285C>A), 20001187(c.3167-4280A>G), 20001252(c.3167-4215C>T), 20001266(c.3167-4201T>C), 20001278(c.3167-4189T>G), 20001288(c.3167-4179C>G), 20001289(c.3167-4178A>G), 20001290(c.3167-4177C>G), 20001295(c.3167-4172T>C), 20001305(c.3167-4162G>T), 20001309(c.3167-4158T>C), 20001338(c.3167-4129T>C), 20001613(c.3167-3854T>C), 20001861(c.3167-3606T>C), 20002127(c.3167-3340G>A), 20002184(c.3167-3283A>G), 20002447(c.3167-3020A>G), 20002464(c.3167-3003C>G), 20002471(c.3167-2996G>A), 20002560(c.3167-2907T>C), 20002648(c.3167-2819G>A), 20002670(c.3167-2797C>T), 20002684(c.3167-2783G>C), 20002801(c.3167-2666T>C), 20002835(c.3167-2632C>T), 20002925(c.3167-2542A>G), 20002953(c.3167-2514C>A), 20002993(c.3167-2474T>C), 20003128(c.3167-2339A>G), 20003202(c.3167-2265G>C), 20003344(c.3167-2123T>C), 20003399(c.3167-2068G>A), 20003587(c.3167-1880A>G), 20003615(c.3167-1852A>T), 20003917(c.3167-1550G>A), 20003925(c.3167-1542G>C), 20004063(c.3167-1404C>T), 20004153(c.3167-1314C>G), 20004171(c.3167-1296T>G), 20004187(c.3167-1280C>T), 20004201(c.3167-1266A>G), 20004310(c.3167-1157A>T), 20004318(c.3167-1149T>C), 20004320(c.3167-1147C>A), 20004448(c.3167-1019G>C), 20004616(c.3167-851C>T), 20005704(c.13+133T>C), 20005716(c.13+145T>A), 20005753(c.13+182T>C), 20005798(c.13+227C>T), 20005838(c.13+267C>G), 20005839(c.13+268C>G), 20005866(c.13+295T>C), 20006521(c.13+950T>G), 20006526(c.13+955C>T), 20006528(c.13+957A>G), 20006574(c.13+1003G>A), 20006578(c.13+1007A>C), 20006641(c.13+1070C>T), 20006642(c.13+1071A>G), 20006709(c.13+1138T>G), 20006711(c.13+1140G>T), 20006752(c.13+1181A>C), 20006818(c.13+1247A>G), 20006825(c.13+1254T>C), 20006930(c.13+1359T>C), 20007078(c.14-1462A>C), 20007245(c.14-1295T>C), 20007246(c.14-1294G>C), 20007251(c.14-1289A>T), 20007257(c.14-1283T>A), 20007458(c.14-1082G>A), 20007466(c.14-1074C>G), 20007509(c.14-1031G>C), 20007511(c.14-1029G>A), 20007559(c.14-981C>A), 20007561(c.14-979T>C), 20007766(c.14-774C>T), 20007832(c.14-708A>G), 20008054(c.14-486G>A), 20008150(c.14-390A>G), 20008222(c.14-318A>G), 20008227(c.14-313A>G), 20008237(c.14-303A>G), 20008299(c.14-241C>T), +1kb 20009176(c.3618T>A), 20009183(c.3625G>A), 20009236(c.3678C>T), 20009241(c.3683C>T), 20009246(c.3688T>C), 20009251(c.3693T>C), 20009254(c.3696T>C), 20009292(c.3734G>A), 20009456(c.3898G>A), 20009469(c.3911A>G), 20009527(c.3969G>A), 20009536(c.3978C>T), 20009550(c.3992T>C), 20009572(c.4014G>T), 20009597(c.4039A>G), 20009620(c.4062T>C), 20010763(c.5205A>G), 20010772(c.5214G>A), 20011099(c.5541C>T), 20011194(c.5636C>T), 20011292(c.5734G>A), 20011329(c.5771C>T), 20011354(c.5796C>T), 20011355(c.5797A>C), 20011662(c.6104A>G), 20011673(c.6115C>T), 20011727(c.6169T>A), 20011755(c.6197G>T), 20011899(c.6341G>C), 20012092(c.6534G>A), 20012108(c.6550C>G), 20012113(c.6555G>C), 20012177(c.6619C>A), 20012178(c.6620A>G), 20012254(c.6696T>C), 20012327(c.6769T>C), 20012379(c.6821C>T), 20012432(c.6874A>G), 20012636(c.7078A>G), 20012654(c.7096T>C), 20012772(c.7214G>T), 20012897(c.7339T>C), 20013410(c.7852C>T), 20013803(c.*8245C>T),
Insertions	-1kb 19952720 (c.-4564_-4563insA), 19952963 (c.-4321_-4320insT), 19953559 (c.-3725_-3724insC), 19954959 (c.-2325_-2324insA), 19956230 (c.-1054_-1053insTT), 19956337 (c.-947_-946insCTT), 5'UTR CDS 3'UTR INTRON 19957445 (c.146+18_146+19dupGT), 19961293 (c.147-2989_147-2987dupGTT), 19963858 (c.147-421dupA), 19965216 (c.394+687_394+689dupAAA), 19966113 (c.395-126_395-125insATTT), 19966561 (c.604+114_604+115dupTT), 19968962 (c.778+749dupT), 19968968 (c.778+755dupT), 19968995 (c.779-776dupA), 19969001 (c.779-774dupA), 19970072 (c.1033+47_1033+52dupAAAAAA), 19972503 (c.1206-110dupA), 19974270 (c.1498+341_1498+342insCAT), 19975148 (c.1695+97dupT), 19975407 (c.1695+354dupA), 19976444 (c.1696-645_1696-644dupTT), 19979432 (c.2059+361dupT), 19981226 (c.2267+428_2267+429insA), 19981837 (c.2268-126_2268-125insC), 19985464 (c.2537-93dupT), 19989775 (c.3166+560_3166+562dupTTA), 19993765 (c.3166+4553dupT), 19995265 (c.3166+6050dupT), 19995703 (c.3166+6486dupC), 19996641 (c.3166+7424_3166+7425insTACCAG), 19998853 (c.3167-6614_3167-6613insTGTG), 20003720 (c.3167-1745_3167-1743dupACA), 20003724 (c.3167-1745_3167-1743dupACA), 20004357 (c.3167-1110_3167-1109insTTCCTT), 20004465 (c.3167-996dupA), 20005704 (c.13+136_13+138dupGAG), 20005709 (c.13+136_13+138dupGAG), 20006033 (c.13+471_13+472dupTT), 20007297 (c.14-1239dupT), 20008403 (c.14-137_14-136insT), +1kb 20010553 (c.4995_*4996insGCTCAAT),
Deletions	-1kb 19952239 (c.-5044_-5040delTAATT), 19953063 (c.-4220_-4218delTTA), 19953748 (c.-3535_-3533delACA), 19955290 (c.-1993_-1990delTTTC), 19956766 (c.-517delA), 5'UTR CDS 3'UTR INTRON 19958746 (c.146+1318_146+1319delCA), 19961271 (c.147-3000_147-2992delCTGTTGTTG), 19963624 (c.147-649_147-648delAT), 19965048 (c.394+522_394+523delCC), 19965930 (c.395-305delG), 19966539 (c.604+92_604+93delTT), 19966708 (c.604+261_604+268delGTTTTTTT), 19967632 (c.605-407_605-405delTAA), 19967681 (c.605-358_605-357delAA), 19967840 (c.605-195_605-194delTA), 19968925 (c.778+713_778+718delTGTTTT), 19971319 (c.1205+237_1205+242delCTTCCC), 19971438 (c.1205+357_1205+361delAAGAA), 19973298 (c.1346-478_1346-476delTAA), 19973347 (c.1346-427_1346-423delCTATA), 19973572 (c.1346-204delA), 19974343 (c.1498+415_1498+419delCTCCT), 19977503 (c.1846+260_1846+267delTACTTATT), 19977523 (c.1846+278delT), 19977705 (c.1846+460_1846+465delAAGGAA), 19980976 (c.2267+180delT), 19981408 (c.2268-551delG), 19982210 (c.2407+109_2407+110delAC), 19982269 (c.2407+181_2407+182delGA), 19982282 (c.2407+181_2407+182delGA), 19982530 (c.2407+429_2407+433delACATA), 19988478 (c.3000+417delT), 19989374 (c.3166+160_3166+163delGACA), 19990278 (c.3166+1065delT), 19990678 (c.3166+1462_3166+1466delGCGGG), 19991080 (c.3166+1863_3166+1869delAGAAAAA), 19991098 (c.3166+1885delA), 19991102 (c.3166+1885delA), 19992446 (c.3166+3229delC), 19992878 (c.3166+3670_3166+3673delAAAA), 19993338 (c.3166+4122delG), 19993566 (c.3166+4357delT), 19995419 (c.3166+6203_3166+6209delCGGGCAT), 19996312 (c.3166+7097delA), 19998335 (c.3167-7123_3167-7122delAA), 19998840 (c.3167-6626delC), 19999560 (c.3167-5903_3167-5900delTAAA), 20001638 (c.3167-3825_3167-3822delGCAC), 20002676 (c.3167-2790delC), 20002696 (c.3167-2770_3167-2765delGGAAAA), 20003666 (c.3167-1800_3167-1793delGTTTGTTT), 20003799 (c.3167-1667_3167-1666delAA), 20003841 (c.3167-1625_3167-1624delAA), 20003862 (c.3167-1604_3167-1603delGA), 20003881 (c.3167-1585_3167-1582delGAGA), 20005791 (c.13+221delT), 20005804 (c.13+234_13+237delTAAC), +1kb 20011635 (c.6078_6084delTCTAGTG), 20011842 (c.6285_6288delTCCT), 20011984 (c.6427_6428delAT), 20013931 (c.8374delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	13
non-synonymous num	2
synonymous substitutions	19957361 (p.Ile26Ile), 19969810 (p.Gly271Gly), 19971066 (p.Asn396Asn), 19974923 (p.Gly520Gly), 19975046 (p.Ala561Ala), 19977110 (p.Lys570Lys), 19978870 (p.Gly619Gly), 19978921 (p.Ile636Ile), 19982044 (p.Asp783Asp), 19983394 (p.Gly803Gly), 19988018 (p.Gly982Gly), 19988051 (p.His993His), 19989110 (p.Leu1020Leu),
non-synonymous substitutions	19968162 (p.Glu243Gln), 19987423 (p.Ser903Asn),
B6 transcript (ENSMUST00000003714)	MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGP DRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFH AHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHS HVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCS EPEKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHG QALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPS PEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYK KMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVS FTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPT KDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQ VDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYL SKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFT VYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQ FTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTV VPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVK VFSPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMF GNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTL EMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQ MSTKE*
MSMv4 transcript	MKFLLLSTFIFLYSSLALARDKHYFIGITEAVWDYASGTEEKKLISVDTEQSNFYLQNGP DRIGRKYKKALYFEYTDGTFSKTIDKPAWLGFLGPVIKAEVEDKVYVHLKNLASRIYTFH AHGVTYTKEYEGAVYPDNTTDFQRADDKVLPGQQYVYVLHANEPSPGEGDSNCVTRIYHS HVDAPKDIASGLIGPLILCKKGSLYKEKEKNIDQEFVLMFSVVDENLSWYLEDNIKTFCS EPQKVDKDNEDFQESNRMYSINGYTFGSLPGLSMCAADRVKWYLFGMGNEVDVHSAFFHG QALTSRNYQTDIINLFPATLIDAYMVAQNPGVWMLSCQNLNHLKAGLQAFFQVRDCNKPS PEDNIQDRHVRHYYIAAEEVIWNYAPSGTDIFTGENLTALESDSRVFFEQGATRIGGSYK KMAYREYTDGSFTNRKQRGPDEEHLGILGPVIWAEVGDTIKVTFHNKGQHPLSIQPMGVS FTAENEGTYYGPPGRSSQQASHVAPKETFTYEWTVPKEMGPTYADPVCLSKMYYSGVDPT KDIFTGLIGPMKICKKGSLLADGRQKDVDKEFYLFPTVFDENESLLLDDNIRMFTTAPDQ VDKEDEDFQESNKMHSMNGFMYGNQPGLNMCLGESIVWYLFSAGNEADVHGIYFSGNTYL SKGERRDTANLFPHKSLTLLMNPDTKGTFDVECLTTDHYTGGMKQKYTVNQCQRQFEDFT VYLGERTYYVAAVEVEWDYSPSRAWEKELHHLQEQNVSNVFLDKEEFFIGSKYKKVVYRQ FTDSSFREQVKRRAEDEHLGILGPPIHANVGDKVKVVFKNMATRPYSIHAHGVKTESSTV VPTLPGEVRTYTWQIPERSGAGREDSACIPWAYYSTVDRVKDLYSGLIGPLIVCRKSYVK VFNPKKKMEFFLLFLVFDENESWYLDDNIKTYSEHPEKVNKDNEEFLESNKMHAINGKMF GNLQGLTMHVKDEVNWYVMGMGNEIDLHTVHFHGHSFQYKHRGVYSSDVFDLFPGTYQTL EMFPQTPGTWLLHCHVTDHVHAGMATTYTVLPVEQVSSQSYRMTWNILYTLLISIIILFQ MSTKE*
homology	99.82 (1086 / 1086)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cp (ENSMUSG00000003617)
Transcript ID	ENSMUST00000003714


..........TAGATACATGCCACAAGTGAAGACAGAGTTCTAACCAAAAATCTTTTACC
TTAAAGCTCTCACACATGTTACAGAGAGAAATTCTAGGTTAATAAACAAAGCTCTTTTTC
CAGTTGAGTAAAATCATTCTTTGCCTTTGAAAACAGGCTTAATTGTGGTTGATTTTTTTC
TTTTCCTCTCTCTTTCCTATCTCTTTTCCTTTCTCTCCTCCTCTTCCTTCTTTGCCCATT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGTATTACTTC
ATTGTACAGACGGGTACTAAAATCCTAGATTCAACAGATTGTCATGTGCCAGTTTCCCCA
TTATGCATAGCTTATTTGGTTTGTGACTGACTTCTTTTTTTTTTTTAAAGATTTATTTAT
TATTATACATAAGTTCACTGTAGCTGACTTCAGACACACCATAAGAGGGTGTCAGATCTC
ATTACAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAA
GAGCAGTCAGTGCTCTTATCCGCTAAGCCATCTCACCAGCCCTTGTGACTGACTTCTATC
ATTCAAACAAAATTATCATTTCCTGGTATGTTCTTCTATTAATCTCTACATAGCAATCCA
TGTCAACTGATAAAGTCTCTATAACACACAGTACAAAAAAATTTTTTTAAATGAAATTTT
TATTGGCTACTTTTACGATGTGCTAAATATGTTTCATATCTTCAAAATTACAAGTAAGTT
TTTGTTAGTTTTCTAAAAATCATTAACAATGACATATTTGATTCATTTTTCCTTGGCTTA
TTAAAAACTGGCTCTGGGTGAGGTGTAGTGCCTGGGATTGCTAGAAGAACAAAGGGAGCA
TTTAGAGATGGTCTCTGCCCTCCTGGAATTTACACGATGAATGGAAGAAGATGCAGAATT
GCGCATGCTGTGCATGTCCAACACAAACAGATGACATTCCTTTGTAGTTA
GAGAAGCCTGGCCACAGGGAACTGTGTTTGTTTTGGTTTTTCCCCTTCGTGGTTTACCAGAACCAATCTGAGTTGGAAAATGCTATTTGCTTTAAAGAAATTAGTTACTCTTTTGCAACATTAAATTGTGTCAGCCAAGCAAATGAAGCCCTATTTATAAAATTGCTTGCTTCTGGTTTCACTTTATTGCATCGTGGGCTCCGAGAGGGAGAAAAATGAAGTTTTTGCTGCTTAGCACATTTATATTTTTGTATAGTTCCTTAGCCTTGGCAAGAGATAAGCATTATTTCATCGGAATTACTGAAGCAGTCTGGGACTATGCTTCTGGCACTGAAGAAAAGAAACTTATTTCAGTTGACAC
GTAAGTCACTATTTTTTGTTCTTTA..........GATGAAAGCGTCTTTTCCTTTTCAG
GGAACAGTCCAATTTCTATCTTCAAAATGGTCCAGATCGTATTGGAAGAAAATATAAGAAGGCCCTTTATTTTGAGTACACAGATGGCACCTTTAGTAAGACTATAGACAAACCAGCCTGGCTAGGGTTTTTAGGCCCTGTCATCAAAGCTGAAGTTGAAGATAAAGTTTATGTTCACTTAAAGAACCTTGCCTCTAGGATCTACACTTTTCATGCACATGGGGTAACGTACACCAAGGAGTATGAGG
GTAAGTGCAGTGTGTGTTCTAGTTG..........ATCTTCACTGCATGATGCTTTCCAG
GAGCCGTCTACCCTGACAACACCACTGATTTTCAACGGGCTGATGACAAAGTGCTTCCCGGACAACAGTATGTGTATGTGCTGCATGCCAATGAGCCAAGTCCTGGAGAGGGAGACAGCAATTGTGTGACCAGGATTTACCACTCCCATGTTGATGCTCCAAAAGATATTGCATCAGGACTCATAGGACCTCTAATACTCTGTAAAAAAG
GTATGTCTTCTCGCTGCTCACAATA..........ACTAAATTACAAATTTCTACTTCAG
GTTCTCTATATAAGGAAAAAGAGAAAAATATTGACCAAGAATTTGTACTAATGTTCTCTGTGGTGGATGAAAATCTCAGCTGGTATCTGGAAGATAACATCAAAACCTTCTGCTCTGAACCCCAGAAAGTTGATAAAGACAATGAAGACTTCCAGGAAAGCAACAGGATGTACT
GTAAGATTACAAAAGACTTGTTCCA..........CAAAAATTCTAATCTTGACTTGCAG
CTATAAATGGATATACATTTGGAAGCCTCCCAGGCCTCTCGATGTGTGCAGCAGACAGAGTGAAGTGGTACCTTTTTGGTATGGGTAATGAAGTTGATGTGCATTCAGCTTTCTTTCATGGCCAAGCCCTGACCAGCAGGAACTATCAAACCGATATAATCAACCTGTTCCCTGCCACCCTAATTGATGCTTATATGGTGGCCCAGAATCCTGGAGTCTGGATGCTCAGTTGCCAGAACCTAAACCATCTGAAAG
GTAAGATGTCTTCACCTCCAGTTAG..........ATCAGTCTTCCCCGTGTTCTTTCAG
CTGGGTTGCAGGCCTTTTTCCAGGTTCGTGACTGTAACAAGCCCTCGCCAGAGGATAATATCCAAGATAGGCATGTGAGACACTATTACATTGCTGCTGAGGAGGTCATCTGGAATTATGCTCCTTCTGGGACGGACATCTTCACTGGAGAGAACTTAACAGCTCTGGAAAG
GTAGCCCCACACAAAGACCATTTCC..........CAACCCCCATTTTTCCTTTTGGCAG
TGATTCAAGGGTATTTTTTGAGCAAGGTGCCACAAGAATTGGTGGCTCTTATAAAAAAATGGCATATCGTGAGTACACAGATGGTTCCTTCACAAACCGAAAACAAAGAGGCCCTGATGAGGAACATCTTGGAATCCTAG
GTGAGTCTAAGCAGAACACACGTGA..........CAACTAATGCTCGCTTTGTCCCTAG
GTCCTGTCATTTGGGCAGAAGTAGGAGACACCATTAAAGTCACCTTTCATAACAAAGGACAGCATCCTCTCAGCATTCAGCCAATGGGAGTAAGTTTCACTGCAGAAAATGAGGGAACATACTATGGCCCACCAGGTCGCTCCTCACAGCAAG
GTGAGTAGGGAATTCAGTCATGGGA..........TTCTTATATCCTTATCCTCAAGCAG
CCTCCCATGTGGCTCCCAAAGAAACCTTTACATACGAATGGACTGTCCCCAAAGAAATGGGGCCCACTTATGCAGATCCTGTGTGCCTATCTAAGATGTACTACTCTGGCGTTGACCCCACCAAAGATATATTTACTGGGCTTATTGGGCCAATGAAAATATGCAAGAAAGGCAGCTTACTTGCAGATGGGAGACAG
GTAAGCCTGGGCAGGGGAGAGGGAA..........ATCTCATTGCTATTTTGATTTGCAG
AAAGATGTAGACAAGGAGTTCTACTTGTTTCCCACAGTGTTTGATGAGAATGAGAGTTTACTCTTAGATGATAATATCAGGATGTTCACAACTGCACCTGATCAAGTGGATAAGGAAGATGAAGACTTTCAGGAGTCTAATAAGATGCACT
GTGAGTACTGCATCTCTTCCACCTG..........CCTCCCACTCTTTCAACTTTTGCAG
CCATGAATGGATTCATGTATGGCAATCAGCCTGGCCTCAATATGTGTCTAGGAGAATCCATTGTGTGGTATTTGTTCAGCGCTGGAAATGAGGCTGATGTGCATGGGATATACTTTTCAGGAAATACTTATCTGTCTAAAGGAGAAAGAAGAGACACTGCAAACCTATTCCCTCATAAAAGTCTCACCCTTCTCATGAACCCTGACACAAAAG
GTATATTTCTCTCATCTGGCCTTAA..........TTTTTTTTTTTTTTTACCATTCCAG
GGACTTTTGATGTTGAGTGCCTTACAACGGATCACTACACAGGTGGCATGAAGCAAAAATACACTGTGAACCAGTGCCAGCGGCAGTTTGAAGATTTCACTGTCTACCTTGGAGAAAGGACCTACTATGTGGCAGCCGTAGAGGTGGAATGGGATTACTCACCAAGCAGGGCCTGGGAAAAGGAGCTGCATCATTTGCAAGAGCAAAA
GTAACTTTCCAGTCTCAGATTCCCA..........ACCTGCACTGGGTCTCCTTTTCTAG
TGTTTCAAATGTATTTTTGGATAAAGAAGAGTTTTTCATAGGCTCAAAGTACAAGAAGGTTGTGTATCGCCAGTTTACTGATAGCTCATTCAGAGAACAGGTGAAGAGACGAGCCGAAGACGAGCACTTGGGCATCCTTG
GTAAGAGGGCAGCCCCATCTTGGTA..........TCCCTTTCCATTTTAATTTTTCCAG
GTCCACCAATTCATGCAAATGTTGGAGACAAAGTTAAAGTTGTCTTTAAAAATATGGCAACCAGGCCATATTCAATACATGCCCATGGGGTGAAAACAGAGAGTTCTACAGTTGTTCCAACGTTACCAG
GTACTGGGTGGAGAGGAATGTAGAA..........GACATGTAACTCTTGGTTAATTTAG
GTGAAGTTCGAACTTATACATGGCAAATTCCAGAAAGATCAGGGGCTGGAAGAGAGGATTCAGCTTGTATCCCATGGGCTTATTACTCAACTGTGGATCGAGTTAAG
GTAAACTTTAAACCATCTCTTCTCT..........AACTGTAGTTTCTGCTTGTTTGCAG
GATCTCTATAGTGGGCTAATAGGCCCATTGATTGTTTGTCGGAAGTCTTATGTGAAAGTATTCAATCCTAAAAAGAAAATGGAGTTTTTCCTTCTGTTTCTAGTATTTGATGAGAATGAATCTTGGTACTTAGATGATAACATCAAAACATACTCTGAACACCCTGAGAAAGTAAACAAAGACAACGAGGAATTCCTAGAAAGCAATAAAATGCATG
GTATGAGACACTATTCTAAGCCACC..........CTGAAATATATCACATTTCCCTCAG
CTATTAATGGGAAAATGTTTGGAAACCTACAAGGCCTCACAATGCACGTGAAAGATGAAGTCAACTGGTATGTGATGGGAATGGGTAATGAAATAGACCTGCACACTGTACACTTCCATGGCCACAGCTTCCAATACAAG
GTAAGAGCTGCCGCAGCACTCAGTC..........CATATTTGTTGTTTTTCTAATAAAG
CACAGGGGAGTATACAGTTCTGATGTCTTTGACCTTTTCCCTGGAACATACCAAACCTTAGAAATGTTTCCCCAAACACCTGGAACCTGGTTACTCCACTGCCACGTGACTGACCATGTCCATGCTGGGATGGCAACTACCTACACTGTTTTACCAGTAGAACAAG
GTAAATCAAGATGAATATCCAGGTA..........ATCCCTCTATCTTCTTTTGCTACAG
TATCATCTCAGAGTTACAGGATGACCTGGAACATCCTCTATACACTACTAATCAGCATCATTATTTTATTCCAAATGTCTACCAAGGAGTAGCCAGGAAAATAAG
GTTGGTATATTTTCTTATCCCAAAC..........ACATTTGGACACTTTTTCCCCACAG
GTGTTTTCACGTCTATTGTAAACAGGAAGGCAGTTGTACAGCTCATTCGCCTGCAGCAAGACCAGTCCCTCAGCTCAGAGGCTTCGTCTCAGCAGTTCCATCCAGAAGCCAGCATTCCAAAGCAAAGCTCCTAACTGTGATCAATTATAGATTTTTGCCCCTCAAAAAGCTATACTCTAAATTAACAAGACCTGTGCTATCACAACACATTTAAATTGTTTACTATACTGCAATATACTGCATATTTTAAAAGTAAGAGAGGCGTTTTTATTTACCTGTAATTTCAGAAGGTCGTCTGTGTAATTTTTATCAGCTAAGGAATCAGATGTCGTTAACACATGAACCCATGGATTTACTAGGCCATAATGACTGCAGGCATTTATCTGAAACATTACAGAAATGCATCACAAGCCAAATACAGCAACAGCAAAACAAGTCATCTCTTCATCCATTCACTAACTCTCTGTCACATCGTAGATTCAGTTGCACACTCTCCTAGGAGAAGGAAGCTTTGCAGATGTATTTCCCTGGAAAAGTGTGTAGTCTTGCTGCTTTCGTATCAAATAATCTGCAATAAATATTTCCTAATATTTTGAAATTTAAAAA
TATTCTACAGAAGTGCTTTCAAGCAAAATAAATAAGTAAATAGAATAGAATAGAATAGAA
TAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAACAGCATTACTCCTAA
GATAAGAGTGGAAATGATTTTTGGGGATGAGAAAATATCCTTTTAAGTTCTCATGATGAC
TGTCATGGAGTATCCTTAATCCAAGAAATTACACTGGTGACCTTTGCACTCATGGTGCAG
TGCCCACAGCAGTCATAGCAACAGGAGTCTATGGAAACCAGAGCAGTATGGGAGGGTGAC
CAAGGCTGTCACAGTTGCCTACAGCACACCTGAAGCCTAAGCGTGGCCCTGACAGGAAAG
AGAACAGTGCAGTAGGCCCTTACCTCAGCCTTTTCAAAACTGCTCGAGGCAACCCTTCTG
AAGAAATCCTCTCATATGCTGGGACACTGCAGGGTGGTAATAAAGGAGTATGGCCGTATT
CTTTATTTTCAGGGTGTGAAATTTGAGTTGGTCGGGTCTCATGTGTAGCCCTGGCTGGCC
TGGAACTCACAGAGATCCCCCTGCCCCTGCCTTCTGAGTGGTAAGATTAAAGGTGTGTGC
CATGACACCTGGCTTTCATTTATTTACTTGTGTGTGTATGTTTGTATGTGCACGTGCAGA
GGTTGAAAAACAATTTTCAGGTCATTTCTCTCCTTCTACTGTGGGTTCCAGGGATGAAAC
TTAGATCACCAGACTTGGCAGCAAGGTCCTTTTCAGGATAAGCAATCTTGGCAGCCTGAG
TTAGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATTTATTTATTATTATA
TGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTACGG
ATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGT
CGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGAGT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TAGATACATGCCACAAGTGAAGACAGAGTTCTAACCAAAAATCTTTTACC TTAAAGCTCTCACACATGTTACAGAGAGAAATTCTAGGTTAATAAACAAAGCTCTTTTTC CAGTTGAGTAAAATCATTCTTTGCCTTTGAAAACAGGCTTAATTGTGGTTGATTTTTTTC TTTTCCTCTCTCTTTCCTATCTCTTTTCCTTTCTCTCCTCCTCTTCCTTCTTTGCCCATT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGTATTACTTC ATTGTACAGACGGGTACTAAAATCCTAGATTCAACAGATTGTCATGTGCCAGTTTCCCCA TTATGCATAGCTTATTTGGTTTGTGACTGACTTCTTTTTTTTTTTTAAAGATTTATTTAT TATTATACATAAGTTCACTGTAGCTGACTTCAGACACACCATAAGAGGGTGTCAGATCTC ATTACAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAA GAGCAGTCAGTGCTCTTATCCGCTAAGCCATCTCACCAGCCCTTGTGACTGACTTCTATC ATTCAAACAAAATTATCATTTCCTGGTATGTTCTTCTATTAATCTCTACATAGCAATCCA TGTCAACTGATAAAGTCTCTATAACACACAGTACAAAAAAATTTTTTTAAATGAAATTTT TATTGGCTACTTTTACGATGTGCTAAATATGTTTCATATCTTCAAAATTACAAGTAAGTT TTTGTTAGTTTTCTAAAAATCATTAACAATGACATATTTGATTCATTTTTCCTTGGCTTA TTAAAAACTGGCTCTGGGTGAGGTGTAGTGCCTGGGATTGCTAGAAGAACAAAGGGAGCA TTTAGAGATGGTCTCTGCCCTCCTGGAATTTACACGATGAATGGAAGAAGATGCAGAATT GCGCATGCTGTGCATGTCCAACACAAACAGATGACATTCCTTTGTAGTTA
1	EXON 1	19957069	19957429	-	2	361	GAGAAGCCTGGCCACAGGGAACTGTGTTTGTTTTGGTTTTTCCCCTTCGTGGTTTACCAG AACCAATCTGAGTTGGAAAATGCTATTTGCTTTAAAGAAATTAGTTACTCTTTTGCAACA TTAAATTGTGTCAGCCAAGCAAATGAAGCCCTATTTATAAAATTGCTTGCTTCTGGTTTC ACTTTATTGCATCGTGGGCTCCGAGAGGGAGAAAAATGAAGTTTTTGCTGCTTAGCACAT TTATATTTTTGTATAGTTCCTTAGCCTTGGCAAGAGATAAGCATTATTTCATCGGAATTA CTGAAGCAGTCTGGGACTATGCTTCTGGCACTGAAGAAAAGAAACTTATTTCAGTTGACA C
	INTRON 1 - 2	19957430	19964279			6850	GTAAGTCACTATTTTTTGTTCTTTA..........GATGAAAGCGTCTTTTCCTTTTCAG
2	EXON 2	19964280	19964527	2	1	248	GGAACAGTCCAATTTCTATCTTCAAAATGGTCCAGATCGTATTGGAAGAAAATATAAGAA GGCCCTTTATTTTGAGTACACAGATGGCACCTTTAGTAAGACTATAGACAAACCAGCCTG GCTAGGGTTTTTAGGCCCTGTCATCAAAGCTGAAGTTGAAGATAAAGTTTATGTTCACTT AAAGAACCTTGCCTCTAGGATCTACACTTTTCATGCACATGGGGTAACGTACACCAAGGA GTATGAGG
	INTRON 2 - 3	19964528	19966238			1711	GTAAGTGCAGTGTGTGTTCTAGTTG..........ATCTTCACTGCATGATGCTTTCCAG
3	EXON 3	19966239	19966448	1	1	210	GAGCCGTCTACCCTGACAACACCACTGATTTTCAACGGGCTGATGACAAAGTGCTTCCCG GACAACAGTATGTGTATGTGCTGCATGCCAATGAGCCAAGTCCTGGAGAGGGAGACAGCA ATTGTGTGACCAGGATTTACCACTCCCATGTTGATGCTCCAAAAGATATTGCATCAGGAC TCATAGGACCTCTAATACTCTGTAAAAAAG
	INTRON 3 - 4	19966449	19968039			1591	GTATGTCTTCTCGCTGCTCACAATA..........ACTAAATTACAAATTTCTACTTCAG
4	EXON 4	19968040	19968213	1	1	174	GTTCTCTATATAAGGAAAAAGAGAAAAATATTGACCAAGAATTTGTACTAATGTTCTCTG TGGTGGATGAAAATCTCAGCTGGTATCTGGAAGATAACATCAAAACCTTCTGCTCTGAAC CCCAGAAAGTTGATAAAGACAATGAAGACTTCCAGGAAAGCAACAGGATGTACT
	INTRON 4 - 5	19968214	19969775			1562	GTAAGATTACAAAAGACTTGTTCCA..........CAAAAATTCTAATCTTGACTTGCAG
5	EXON 5	19969776	19970030	1	1	255	CTATAAATGGATATACATTTGGAAGCCTCCCAGGCCTCTCGATGTGTGCAGCAGACAGAG TGAAGTGGTACCTTTTTGGTATGGGTAATGAAGTTGATGTGCATTCAGCTTTCTTTCATG GCCAAGCCCTGACCAGCAGGAACTATCAAACCGATATAATCAACCTGTTCCCTGCCACCC TAATTGATGCTTATATGGTGGCCCAGAATCCTGGAGTCTGGATGCTCAGTTGCCAGAACC TAAACCATCTGAAAG
	INTRON 5 - 6	19970031	19970911			881	GTAAGATGTCTTCACCTCCAGTTAG..........ATCAGTCTTCCCCGTGTTCTTTCAG
6	EXON 6	19970912	19971083	1	2	172	CTGGGTTGCAGGCCTTTTTCCAGGTTCGTGACTGTAACAAGCCCTCGCCAGAGGATAATA TCCAAGATAGGCATGTGAGACACTATTACATTGCTGCTGAGGAGGTCATCTGGAATTATG CTCCTTCTGGGACGGACATCTTCACTGGAGAGAACTTAACAGCTCTGGAAAG
	INTRON 6 - 7	19971084	19972614			1531	GTAGCCCCACACAAAGACCATTTCC..........CAACCCCCATTTTTCCTTTTGGCAG
7	EXON 7	19972615	19972754	2	1	140	TGATTCAAGGGTATTTTTTGAGCAAGGTGCCACAAGAATTGGTGGCTCTTATAAAAAAAT GGCATATCGTGAGTACACAGATGGTTCCTTCACAAACCGAAAACAAAGAGGCCCTGATGA GGAACATCTTGGAATCCTAG
	INTRON 7 - 8	19972755	19973776			1022	GTGAGTCTAAGCAGAACACACGTGA..........CAACTAATGCTCGCTTTGTCCCTAG
8	EXON 8	19973777	19973929	1	1	153	GTCCTGTCATTTGGGCAGAAGTAGGAGACACCATTAAAGTCACCTTTCATAACAAAGGAC AGCATCCTCTCAGCATTCAGCCAATGGGAGTAAGTTTCACTGCAGAAAATGAGGGAACAT ACTATGGCCCACCAGGTCGCTCCTCACAGCAAG
	INTRON 8 - 9	19973930	19974861			932	GTGAGTAGGGAATTCAGTCATGGGA..........TTCTTATATCCTTATCCTCAAGCAG
9	EXON 9	19974862	19975058	1	0	197	CCTCCCATGTGGCTCCCAAAGAAACCTTTACATACGAATGGACTGTCCCCAAAGAAATGG GGCCCACTTATGCAGATCCTGTGTGCCTATCTAAGATGTACTACTCTGGCGTTGACCCCA CCAAAGATATATTTACTGGGCTTATTGGGCCAATGAAAATATGCAAGAAAGGCAGCTTAC TTGCAGATGGGAGACAG
	INTRON 9 - 10	19975059	19977095			2037	GTAAGCCTGGGCAGGGGAGAGGGAA..........ATCTCATTGCTATTTTGATTTGCAG
10	EXON 10	19977096	19977246	0	1	151	AAAGATGTAGACAAGGAGTTCTACTTGTTTCCCACAGTGTTTGATGAGAATGAGAGTTTA CTCTTAGATGATAATATCAGGATGTTCACAACTGCACCTGATCAAGTGGATAAGGAAGAT GAAGACTTTCAGGAGTCTAATAAGATGCACT
	INTRON 10 - 11	19977247	19978859			1613	GTGAGTACTGCATCTCTTCCACCTG..........CCTCCCACTCTTTCAACTTTTGCAG
11	EXON 11	19978860	19979072	1	1	213	CCATGAATGGATTCATGTATGGCAATCAGCCTGGCCTCAATATGTGTCTAGGAGAATCCA TTGTGTGGTATTTGTTCAGCGCTGGAAATGAGGCTGATGTGCATGGGATATACTTTTCAG GAAATACTTATCTGTCTAAAGGAGAAAGAAGAGACACTGCAAACCTATTCCCTCATAAAA GTCTCACCCTTCTCATGAACCCTGACACAAAAG
	INTRON 11 - 12	19979073	19980590			1518	GTATATTTCTCTCATCTGGCCTTAA..........TTTTTTTTTTTTTTTACCATTCCAG
12	EXON 12	19980591	19980798	1	2	208	GGACTTTTGATGTTGAGTGCCTTACAACGGATCACTACACAGGTGGCATGAAGCAAAAAT ACACTGTGAACCAGTGCCAGCGGCAGTTTGAAGATTTCACTGTCTACCTTGGAGAAAGGA CCTACTATGTGGCAGCCGTAGAGGTGGAATGGGATTACTCACCAAGCAGGGCCTGGGAAA AGGAGCTGCATCATTTGCAAGAGCAAAA
	INTRON 12 - 13	19980799	19981962			1164	GTAACTTTCCAGTCTCAGATTCCCA..........ACCTGCACTGGGTCTCCTTTTCTAG
13	EXON 13	19981963	19982102	2	1	140	TGTTTCAAATGTATTTTTGGATAAAGAAGAGTTTTTCATAGGCTCAAAGTACAAGAAGGT TGTGTATCGCCAGTTTACTGATAGCTCATTCAGAGAACAGGTGAAGAGACGAGCCGAAGA CGAGCACTTGGGCATCCTTG
	INTRON 13 - 14	19982103	19983392			1290	GTAAGAGGGCAGCCCCATCTTGGTA..........TCCCTTTCCATTTTAATTTTTCCAG
14	EXON 14	19983393	19983521	1	1	129	GTCCACCAATTCATGCAAATGTTGGAGACAAAGTTAAAGTTGTCTTTAAAAATATGGCAA CCAGGCCATATTCAATACATGCCCATGGGGTGAAAACAGAGAGTTCTACAGTTGTTCCAA CGTTACCAG
	INTRON 14 - 15	19983522	19985559			2038	GTACTGGGTGGAGAGGAATGTAGAA..........GACATGTAACTCTTGGTTAATTTAG
15	EXON 15	19985560	19985666	1	0	107	GTGAAGTTCGAACTTATACATGGCAAATTCCAGAAAGATCAGGGGCTGGAAGAGAGGATT CAGCTTGTATCCCATGGGCTTATTACTCAACTGTGGATCGAGTTAAG
	INTRON 15 - 16	19985667	19987358			1692	GTAAACTTTAAACCATCTCTTCTCT..........AACTGTAGTTTCTGCTTGTTTGCAG
16	EXON 16	19987359	19987575	0	1	217	GATCTCTATAGTGGGCTAATAGGCCCATTGATTGTTTGTCGGAAGTCTTATGTGAAAGTA TTCAATCCTAAAAAGAAAATGGAGTTTTTCCTTCTGTTTCTAGTATTTGATGAGAATGAA TCTTGGTACTTAGATGATAACATCAAAACATACTCTGAACACCCTGAGAAAGTAAACAAA GACAACGAGGAATTCCTAGAAAGCAATAAAATGCATG
	INTRON 16 - 17	19987576	19987932			357	GTATGAGACACTATTCTAAGCCACC..........CTGAAATATATCACATTTCCCTCAG
17	EXON 17	19987933	19988072	1	0	140	CTATTAATGGGAAAATGTTTGGAAACCTACAAGGCCTCACAATGCACGTGAAAGATGAAG TCAACTGGTATGTGATGGGAATGGGTAATGAAATAGACCTGCACACTGTACACTTCCATG GCCACAGCTTCCAATACAAG
	INTRON 17 - 18	19988073	19989052			980	GTAAGAGCTGCCGCAGCACTCAGTC..........CATATTTGTTGTTTTTCTAATAAAG
18	EXON 18	19989053	19989218	0	1	166	CACAGGGGAGTATACAGTTCTGATGTCTTTGACCTTTTCCCTGGAACATACCAAACCTTA GAAATGTTTCCCCAAACACCTGGAACCTGGTTACTCCACTGCCACGTGACTGACCATGTC CATGCTGGGATGGCAACTACCTACACTGTTTTACCAGTAGAACAAG
	INTRON 18 - 19	19989219	20005466			16248	GTAAATCAAGATGAATATCCAGGTA..........ATCCCTCTATCTTCTTTTGCTACAG
19	EXON 19	20005467	20005571	1	-	105	TATCATCTCAGAGTTACAGGATGACCTGGAACATCCTCTATACACTACTAATCAGCATCA TTATTTTATTCCAAATGTCTACCAAGGAGTAGCCAGGAAAATAAG
	INTRON 19 - 20	20005572	20008539			2968	GTTGGTATATTTTCTTATCCCAAAC..........ACATTTGGACACTTTTTCCCCACAG
20	EXON 20	20008540	20009145	-	-	606	GTGTTTTCACGTCTATTGTAAACAGGAAGGCAGTTGTACAGCTCATTCGCCTGCAGCAAG ACCAGTCCCTCAGCTCAGAGGCTTCGTCTCAGCAGTTCCATCCAGAAGCCAGCATTCCAA AGCAAAGCTCCTAACTGTGATCAATTATAGATTTTTGCCCCTCAAAAAGCTATACTCTAA ATTAACAAGACCTGTGCTATCACAACACATTTAAATTGTTTACTATACTGCAATATACTG CATATTTTAAAAGTAAGAGAGGCGTTTTTATTTACCTGTAATTTCAGAAGGTCGTCTGTG TAATTTTTATCAGCTAAGGAATCAGATGTCGTTAACACATGAACCCATGGATTTACTAGG CCATAATGACTGCAGGCATTTATCTGAAACATTACAGAAATGCATCACAAGCCAAATACA GCAACAGCAAAACAAGTCATCTCTTCATCCATTCACTAACTCTCTGTCACATCGTAGATT CAGTTGCACACTCTCCTAGGAGAAGGAAGCTTTGCAGATGTATTTCCCTGGAAAAGTGTG TAGTCTTGCTGCTTTCGTATCAAATAATCTGCAATAAATATTTCCTAATATTTTGAAATT TAAAAA
	3' upstream sequence						TATTCTACAGAAGTGCTTTCAAGCAAAATAAATAAGTAAATAGAATAGAATAGAATAGAA TAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAACAGAACAGCATTACTCCTAA GATAAGAGTGGAAATGATTTTTGGGGATGAGAAAATATCCTTTTAAGTTCTCATGATGAC TGTCATGGAGTATCCTTAATCCAAGAAATTACACTGGTGACCTTTGCACTCATGGTGCAG TGCCCACAGCAGTCATAGCAACAGGAGTCTATGGAAACCAGAGCAGTATGGGAGGGTGAC CAAGGCTGTCACAGTTGCCTACAGCACACCTGAAGCCTAAGCGTGGCCCTGACAGGAAAG AGAACAGTGCAGTAGGCCCTTACCTCAGCCTTTTCAAAACTGCTCGAGGCAACCCTTCTG AAGAAATCCTCTCATATGCTGGGACACTGCAGGGTGGTAATAAAGGAGTATGGCCGTATT CTTTATTTTCAGGGTGTGAAATTTGAGTTGGTCGGGTCTCATGTGTAGCCCTGGCTGGCC TGGAACTCACAGAGATCCCCCTGCCCCTGCCTTCTGAGTGGTAAGATTAAAGGTGTGTGC CATGACACCTGGCTTTCATTTATTTACTTGTGTGTGTATGTTTGTATGTGCACGTGCAGA GGTTGAAAAACAATTTTCAGGTCATTTCTCTCCTTCTACTGTGGGTTCCAGGGATGAAAC TTAGATCACCAGACTTGGCAGCAAGGTCCTTTTCAGGATAAGCAATCTTGGCAGCCTGAG TTAGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGATTTATTTATTATTATA TGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTTGTTACGG ATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAGT CGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGAGT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Cp (ENSMUSG00000003617)
Transcript ID	ENSMUST00000003714

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 1086 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information