MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Prrg2 (ENSMUSG00000007837)

Cross Reference

CCDS	CCDS21227.1
EMBL	AF220205, BC025098
GO	GO:0005509, GO:0005515, GO:0005576, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name	Prrg2-201
protein_id	AAG44244.1, AAH25098.1
RefSeq_mRNA	NM_022999.1
RefSeq_mRNA_predicted	XM_011250888.1
RefSeq_peptide	NP_075375
RefSeq_peptide_predicted	XP_006541125.1, XP_006541126.1, XP_011249190.1

UCSC	uc009gsv.1
UniParc	UPI00000E69E2
Uniprot/SWISSPROT	Q8R182

Definition

protein_id:ENSMUSP00000007981
translation:

MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELL
TPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGI
LLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAA
SGVHDAPPPPYSSLRRPH

Chromosome

Length
Position(start - end)

6645
45054179 - 45060825

Orient to Chromosome

minus

Link

Location : (7:45054179-45060825)
/

Detail Map

name	Prr12 (ENSMUSG00000046574)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Prr12 note : proline rich 12 [Source:MGI Symbol;Acc:MGI:2679002]

name	Prrg2 (ENSMUSG00000007837)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Prrg2 note : proline-rich Gla (G-carboxyglutamic acid) polypeptide 2 [Source:MGI Symbol;Acc:MGI:1929596]

name	Nosip (ENSMUSG00000003421)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Nosip note : nitric oxide synthase interacting protein [Source:MGI Symbol;Acc:MGI:1913644]

name	Prr12 (ENSMUSG00000046574)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000057293

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000107833

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000007981

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000133587

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000107832

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000107831

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000145734

name	Prrg2 (ENSMUSG00000007837)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000129101

name	Nosip (ENSMUSG00000003421)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000107830

name	Nosip (ENSMUSG00000003421)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000003513

name	Nosip (ENSMUSG00000003421)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000107829

name	Nosip (ENSMUSG00000003421)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000150609

name	Prr12 (ENSMUSG00000046574) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS52241.1 RefSeq_peptide:NP_778187 RefSeq_mRNA:NM_175022.2 Uniprot/SPTREMBL:E9PYL2 UCSC:uc009gsu.1 EMBL:AC126256 GO:GO:0003674 GO:GO:0003677 GO:GO:0005575 GO:GO:0008150 MGI_trans_name:Prr12-201 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0008150 UniParc:UPI0000428DE7
definition	note : transcript_id=ENSMUST00000057293 protein_id : ENSMUSP00000054702 translation : MDRNYPSAGFGDPLGAGAGWSYERSAKASLVYGSSRTSHPETDILHRQAYAAPHPLQSYATNHHPAGLSGLFDTGLHHAGSAGPDASVMNLISALESRGPQPGPSASSLLSQFRSPSWQTAMHTPGPTELFISGALPGSSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAATAAEPSSPQLYNFSGAAPGPPPERALPRQDTVIKHYQRPASAQPPPPPPPAHSLQHYLSCGGSYPSMGHRASLACSPLGGGEPSPGAGEPSKGGPSGATAGAAGRATGPETAGGGAAGGGGGYRPIIQSPGYKTSKGGYGPATGGATRPPPPRSTATPKCQSLGGPAAAYAAGKASGAGGAGSQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKGPSYSGGPPQPPSGPPPPGLATCQSYSPDQLQGQLYGVQSEPYPGPAAHSQGLPTASPSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRPPGVGSPGAPGKYLSSVLASAPFLAPPGASSYAAGAGGYKGKGDGSELLAGPGGSAAERTEDEEFLIQHLLQAPSPPRTSGADGLVGEDGPADAAKGLGGSGGAGGAPGTPYELAKEDPQRYHLQSVIRTSASLDEGATAALELGLGRMKDKKKGPERGGETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPSAQATQPAPHGLLLEAGGPDLPMVLPPPPPQLLPSVLSHAPSPSPSAPKVGVHLLEPATRDGAPQPPPPPPPPMPLQLEAHLRGHGLEPTAPSPRLRPEESLEPPGAMQELLGALEPLPSGPGDPGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQDEERSFFPTMEEMFGGGAADDYGKAGQTEDDGDPKTGAGPPPGPTAYDPYGPYCGGRASGTGPETPGLGLDHNKPPELPSTVNAEPLGLIQSGPHQSAPPPPPPPPPPPPVSEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRRDPPFQTPKKLYAQEYEFEADEDKADVPADIRLNPRRLPDLVSSCRSRPALSPLGDIDFCPPNPGPDGPRRRGRKPTKAKRDGPPRPRGRPRIRPLEGPAMAGPASITTDGAKKPRGRGRGRGRKAEEMGGTRLEPLKPLKIKLSVPKAGEGLGAPSNDVISGVDHNSLDSNLTREKIEAKIKEVEEKQPEMKSGFMASFLDFLKSGKRHPPLYQAGLTPPLSPPKSVPASVPTRGLQPPPPTVPTVPHPAPSGPFGLGGALEAAESEGLGLGCPSPCKRLDEELKRNLETLPSFSSDEEDSVAKNRDLQESISSAISALDDPPLTGPKDTSTPEEPPLDTGPTASGPPPLPSLPSSNSSGTPEPPLLEEKPPPTPPPAPTPQPAPPPPPPPPPVPALPSPTPLVTPVASSPPPPPPPPPPPPALPSPPPPPPPAPTTVPPVAPPEEPPAPSPEDPEPPDARPLHLAKKQETAAVCGETDEEAGESGGEGIFRERDEFVIRAEDIPSLKLALQTGREPPPIWRVQKALLQKFTPEIKDGQRQFCATSNYLGYFGDAKNRYQRLYVKFLENVNKKDYVRVCARKPWHRPPLPVRRSGQTKGPTPVGGNSAPPSKVQAPPPKPETPEKMTSEKPPEPAPEPAVPEPPAPEKPSPPRPVEKEKEKEKEKEKEKERVTRPLRSERATSGRQMRTDRSLATGQSTTSRLPKARPSKVKAEPPPKKRKKWLKEAVGNASAGDGPGGSSSDSESSPGAPSEDERAVPGRLLKTRAMREMYRSYVEMLVSTALDPDMIQALEDTHDELYLPPMRKIDGLLNEHKKKVLKRLSLSPALQDALHTFPQLQVEQTGEGSPEEGAVRLRPAGEPYNRKTLSKLKRSVVRAQEFKVELEKSGYYTLYHSLHHYKYHTFLRCRDQTLAIEGGAEDLGQEEVVQQCMRNQPWLEQLFDSFSDLLAQAQAHSRCG

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS21227.1 Uniprot/SWISSPROT:Q8R182 RefSeq_peptide_predicted:XP_006541125.1 RefSeq_peptide_predicted:XP_006541126.1 Vega_transcript:OTTMUST00000057184 Vega_transcript:Prrg2-001 UCSC:uc009gsw.1 EMBL:AF220205 EMBL:BC025098 GO:GO:0005509 GO:GO:0005515 GO:GO:0005515 GO:GO:0005576 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-001 Vega_translation:201179 Vega_translation:OTTMUSP00000027564 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0043167 protein_id:AAG44244.1 protein_id:AAH25098.1 OTTP:OTTMUSP00000027564 OTTT:OTTMUST00000057184 UniParc:UPI00000E69E2
definition	note : transcript_id=ENSMUST00000107833 protein_id : ENSMUSP00000103464 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGILLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAASGVHDAPPPPYSSLRRPH

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS21227.1 Uniprot/SWISSPROT:Q8R182 RefSeq_peptide:NP_075375 RefSeq_mRNA:NM_022999.1 RefSeq_mRNA_predicted:XM_011250888.1 RefSeq_peptide_predicted:XP_006541125.1 RefSeq_peptide_predicted:XP_006541126.1 RefSeq_peptide_predicted:XP_011249190.1 UCSC:uc009gsv.1 EMBL:AF220205 EMBL:BC025098 GO:GO:0005509 GO:GO:0005515 GO:GO:0005576 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0043167 protein_id:AAG44244.1 protein_id:AAH25098.1 UniParc:UPI00000E69E2
definition	note : transcript_id=ENSMUST00000007981 protein_id : ENSMUSP00000007981 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGILLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAASGVHDAPPPPYSSLRRPH

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057189 Vega_transcript:Prrg2-006 Uniprot/SPTREMBL:D6RFN3 UCSC:uc009gsv.1 EMBL:AC126256 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-006 Vega_translation:201180 Vega_translation:OTTMUSP00000027568 goslim_goa:GO:0005575 goslim_goa:GO:0008150 OTTP:OTTMUSP00000027568 OTTT:OTTMUST00000057189 UniParc:UPI00015AA4E8
definition	note : transcript_id=ENSMUST00000133587 protein_id : ENSMUSP00000121232 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQGALLGKLYVQWQGRAWTGGCCRPGGGTDLWDPPHCLGRLGSLLVSALSTAPPQRPGVLSARDRAHHPLESSDASISTLAPRPSHL

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057188 Vega_transcript:Prrg2-005 Uniprot/SPTREMBL:D3Z0A6 UCSC:uc009gsv.1 EMBL:AC126256 EMBL:CH466603 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-005 Vega_translation:201181 Vega_translation:OTTMUSP00000027567 goslim_goa:GO:0005575 goslim_goa:GO:0008150 protein_id:EDL22790.1 OTTP:OTTMUSP00000027567 OTTT:OTTMUST00000057188 UniParc:UPI000154C69E
definition	note : transcript_id=ENSMUST00000107832 protein_id : ENSMUSP00000103463 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQGALLGKLYVQWQGRTGLIIPLSPQTPQSPPLPPGLPTYEQALAASGVHDAPPPPYSSLRRPH

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057190 Vega_transcript:Prrg2-007 Uniprot/SPTREMBL:D3Z0A7 UCSC:uc009gsv.1 EMBL:AC126256 GO:GO:0005509 GO:GO:0005576 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-007 Vega_translation:201182 Vega_translation:OTTMUSP00000027569 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0043167 OTTP:OTTMUSP00000027569 OTTT:OTTMUST00000057190 UniParc:UPI00001E40F6
definition	note : transcript_id=ENSMUST00000107831 protein_id : ENSMUSP00000103462 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQEAQSFLVGRRRFPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGILLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAASGVHDAPPPPYSSLRRPH

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057187 Vega_transcript:Prrg2-004 Uniprot/SPTREMBL:D3Z4X3 UCSC:uc009gsv.1 EMBL:AC126256 GO:GO:0005509 GO:GO:0005576 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-004 Vega_translation:201183 Vega_translation:OTTMUSP00000027566 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0043167 OTTP:OTTMUSP00000027566 OTTT:OTTMUST00000057187 UniParc:UPI00015AA4E9
definition	note : transcript_id=ENSMUST00000145734 protein_id : ENSMUSP00000116516 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELLTPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGILLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLP

name	Prrg2 (ENSMUSG00000007837) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057186 Vega_transcript:Prrg2-003 Uniprot/SPTREMBL:D3YXX0 UCSC:uc009gsw.1 EMBL:AC126256 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Prrg2-003 Vega_translation:201184 Vega_translation:OTTMUSP00000027565 goslim_goa:GO:0005575 goslim_goa:GO:0008150 OTTP:OTTMUSP00000027565 OTTT:OTTMUST00000057186 UniParc:UPI00015AA4EA
definition	note : transcript_id=ENSMUST00000129101 protein_id : ENSMUSP00000118240 translation : MRGRPSLLLVYMGLATCLDTSPHREQNQGALLGKLYVQWQGRAWTGGCCRPGGGTDLWDPPHCLGRLG

name
type	misc_feature
link
xref
definition	note : contig AC126256.4 47052..188677(1)

name	Prrg2 (ENSMUSG00000007837)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057191 Vega_transcript:OTTMUST00000057191 MGI_trans_name:Prrg2-008 OTTT:OTTMUST00000057191
definition	note : retained_intron note : transcript_id=ENSMUST00000135099

name	Prrg2 (ENSMUSG00000007837)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057185 Vega_transcript:OTTMUST00000057185 MGI_trans_name:Prrg2-002 OTTT:OTTMUST00000057185
definition	note : processed_transcript note : transcript_id=ENSMUST00000133681

name	Nosip (ENSMUSG00000003421)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057194 Vega_transcript:OTTMUST00000057194 MGI_trans_name:Nosip-003 OTTT:OTTMUST00000057194
definition	note : processed_transcript note : transcript_id=ENSMUST00000141908

name	Nosip (ENSMUSG00000003421)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000057195 Vega_transcript:OTTMUST00000057195 MGI_trans_name:Nosip-004 OTTT:OTTMUST00000057195
definition	note : retained_intron note : transcript_id=ENSMUST00000143901

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Prrg2 (ENSMUSG00000007837)
Transcript ID	ENSMUST00000007981

Reports
substitution
cSNPs	2
Insertion	9
Deletion	12
SNPs	+1kb 45062414(c.-1589T>C), 45062471(c.-1646A>T), 45062663(c.-1838G>A), 45062699(c.-1874A>T), 45062940(c.-2115T>G), 45062971(c.-2146G>T), 45063252(c.-2427T>C), 45063315(c.-2490A>G), 45063353(c.-2528G>A), 45063468(c.-2643C>T), 45063660(c.-2835G>C), 45063855(c.-3030T>A), 45064318(c.-3493C>T), 45064425(c.-3600T>C), 45064811(c.-3986C>A), 45064923(c.-4098A>G), 45064979(c.-4154A>C), 45065859(c.-5034T>C), 45065912(c.-5087T>C), 45066201(c.-5376A>C), 45066356(c.-5531T>A), 45066515(c.-5690A>T), 5'UTR CDS 45056874(c.318G>A), 45059997(c.282A>G), 3'UTR 45053671(c.508G>A), 45053868(c.311T>C), INTRON 45054474(c.578+45G>A), 45055304(c.450-657T>G), 45055505(c.450-858T>A), 45055812(c.449+931A>C), 45055969(c.449+774G>T), 45055984(c.449+759T>C), 45056672(c.449+71A>G), 45056723(c.449+20A>G), 45056905(c.308-21A>T), 45056923(c.308-39A>G), 45056940(c.308-56T>G), 45056941(c.308-57C>T), 45057119(c.308-235C>T), 45057169(c.308-285G>A), 45057189(c.308-305A>T), 45057216(c.308-332A>G), 45057217(c.308-333C>T), 45057222(c.308-338G>C), 45057259(c.308-375A>G), 45057287(c.308-403T>C), 45057837(c.308-953G>A), 45058342(c.308-1458C>A), 45058402(c.308-1518C>T), 45058448(c.307+1524T>A), 45058545(c.307+1427A>T), 45058584(c.307+1388G>A), 45060106(c.268-95G>A), 45060107(c.268-96T>C), 45060153(c.267+52T>C), -1kb 45048848(c.5331A>G), 45049365(c.4814A>T), 45049496(c.4683T>C), 45050492(c.3687C>T), 45050500(c.3679T>A), 45050517(c.3662C>T), 45050590(c.3589C>T), 45050657(c.3522T>C), 45051187(c.2992A>C), 45051356(c.2823C>T), 45051410(c.2769T>G), 45051561(c.2618T>A), 45051865(c.2314C>T), 45051948(c.2231A>G), 45052041(c.2138G>A), 45052163(c.2016C>T), 45052598(c.1581T>G), 45053020(c.1159C>T),
Insertions	+1kb 45063336 (c.-2512_-2511insTTTTT), 45063792 (c.-2968dupA), 45063798 (c.-2974_-2973insA), 45063804 (c.-2980_-2979insC), 45064637 (c.-3814_-3813dupAA), 5'UTR CDS 3'UTR INTRON 45055049 (c.450-403dupT), 45056089 (c.449+653_449+654insTTTTT), -1kb 45050138 (c.4040_4041insCCT), 45052993 (c.1185_1186insA),
Deletions	+1kb 45062153 (c.-1329delT), 45063043 (c.-2221_-2219delGGT), 45063355 (c.-2531delC), 45065140 (c.-4317_-4316delCT), 5'UTR CDS 3'UTR 45053948 (c.228_230delCCA), INTRON 45058257 (c.308-1375_308-1374delGC), 45060107 (c.267+97delA), -1kb 45050578 (c.3600delC), 45050983 (c.3193_3195delCCC), 45051424 (c.2753_2754delTG), 45051601 (c.2577delG), 45052248 (c.1928_1930delTGG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	45056874 (p.Arg106Arg), 45059997 (p.Glu94Glu),
non-synonymous substitutions
B6 transcript (ENSMUST00000007981)	MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELL TPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGI LLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAA SGVHDAPPPPYSSLRRPH*
MSMv4 transcript	MRGRPSLLLVYMGLATCLDTSPHREQNQVLDIFLDAPEAQSFLVGRRRFPRANHWDLELL TPGNLERECLEERCSWEEAREYFEDNTLTERFWESYTYNGKGGRGRVDVAGLAVGLTSGI LLIVLAGLGAFWYLHYRRRRLRGQESCLQETGLIIPLSPQTPQSPPLPPGLPTYEQALAA SGVHDAPPPPYSSLRRPH*
homology	100.00 (199 / 199)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Prrg2 (ENSMUSG00000007837)
Transcript ID	ENSMUST00000007981


..........GCGCTGTTAATGATTGACAGGGATTCGGAGTGCGAAACCTTATCCTACCT
CCCTCAGAACTGCAAATTTCTCCCACAAGAAGGAAACTTGGCGACGCGACCCCTCACCGC
CTGCAGCTTACCTCAAGAGCGGTTATCCGGCTTGTCGTTGCTTCAACTACGTCCCGAACC
GGAAAAAGAGTTCTGTTTTTAAACTCTACTCCTCCTACTTCCGCCCGACAGGAGGAGACC
GGAAATAACTCTGCCCCTAGTCGCGGAGGCGCTTCGCCTGGCTTGGTAAGTGCTTTCTTC
TTCTCTTCCATCCCCCCGGAAACGTGAGTGACTACTCGAAGGTTCCGGTGAGCGAAAGTG
GTTTGACTCTGGGAGACACCCTAGCCTGTTCTAGGCATTACCCAGAGCGGGGCAGTTGCT
TTGAGTCTCTTCAAGTTTGAGTTTGGAGACTTAACTCTGTCACCCGAAGAGACTGATATC
CAGTTCCCCAAATATATTACTTATTTTTTCCCCCATTGCATCTTAAGAGTCGATAAGTGA
GAACTCTTTCCCCTATTATAGAAAAAACAATTTTCAAAGATCTCGAGACTAAACTGTTCA
AGTTATCCTCAGGAAACAGATTTATTGTGGTACCGCCCAGTTATTCTAGGAACCAAAGAA
TTCCCTTCCCACCAGTGTGTAGATCTCTTGAGACCTAAGATTTATTTTCCTGGCTCTGCC
AAGTCGTCTGTAGAGAGAGACTCGGGCTGGACAAGTAGGGAAGAGGAGACTCTAATAAAG
CCCCCTAGATCCCTCCATGGTGTCGGAAAGCCTTGTTTCTTCTGTGTGGGGCCGTGGCAC
TGAAGACCTTGATCCTATGGTCCCTTTAAGTACTTTGTCCCTTACCTGAGTCCCTCCCAA
AGAAGGTAATCAGTAGCCCCGCCCCCTCGCCAGTAGCCGGCTCGGGCCTAGTAACCCAGG
AGGAGCTCCCCTCCTCTCCTCCCCTCCCCTCTTGCCTACCCCTTTGCACA
GCTGGCTACTCTGACCCAGAGGGCCTTCGTTAAAGAAGAGAGGCAGAGCTCCCAGCCCTGGCCAG
GTAAGTGGGTGCATGCTCCCCGAGA..........TTACTTGCTTTTATCATGATGGCAG
AGTGCGGGCAGGGAGTCCTGGCCTCCTAACTCCGCTGCAGCATTTGTCATCTGGGAGTCCACACAGTATGAGGGGCCGTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAG
GTGAGTGTTTGAGTCTCTTCAAGTT..........CTGCTTTTGACTCTGATGTCCTTAG
TTCTTGACATCTTCCTGGATGCCCCAGAGGCCCAGAGTTTCTTAGTTGGCCGCAGGCGTTTTCCTCGTGCTAACCACTGGGACCTGGAGTTGCTGACCCCTGGGAACCTGGAACGGGAGTGTCTGGAGGAGAGGTGCTCCTGGGAGGAGGCCCGGGAGTACTTTGAGGACAACACACTGACG
GTGAGGGCCTCAGAGGACCCTGGCA..........TTTTCCTTCTCTTCTCTAACCCTAG
GAGCGCTTCTGGGAGAGCTATACGTACAATGGCAAGGGAG
GTGAGTGATGCTTCTCAGCCCTCTC..........AATCTCTGGCACCCTCTGCCCACAG
GGCGTGGACGAGTGGATGTTGCAGGCCTGGCGGTGGGACTGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCTTGGGAGCCTTTTGGTATCTGCATTATCGACGGCGCCGCCTCAGAGGCCAGGAGTCCTGTCTGCAAGA
GTAAGGAGTCCTCTAGGAGGAGGGG..........CTAACCACACTTTTTCTGTTTCCAG
GACCGGGCTCATCATCCCCTTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCTTTAGCAGCCTCCGGGGTGCACGACGCACCTCCGCCCCCTTACTCCAG
GTATGAGGCGGGGCTTCTGCCTGGG..........CACTCCCAACCCCCATCCCCGATAG
CCTCAGAAGGCCTCACTGAAGACCTGCTTGCAGCGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGTGTTTCCGCCGGGCACGCATACACGCACGTCCCTGACCATCCTGTTGCCGAGTTGGTGCCCCCGGCCCTCCAGTGACCCCCCCCCACACTTCGTCTGAGCAGTGGCCCTGCCTCAGAATGGGCAGACCTTTTAGGAAACTCGGATCAGACGTGACTCGGCTGTCACCCCACTGGTGCCGCGGGGCACGTACGCGCAGGGAACCAGGCCCTTGCACACGCCTGACTTCGTGTATTTCCCCAGTCGGGCACATGGGCGGTTTGTAATCCAGTATAAAGGTGGGGGGCGCATTTGCAATGTGCTGTAAGCGGGGTGTCACGCTTGTGTTGCACCCGGGTAAATGGAGTTGATCTGAGCTGCCCTCTACTTAAAAACCCTTTGGGAAAGGAAGGGGGGATGGAAGAAATAAAAAATTGAAACAATG
AGAAAAAAATAAAAATGCAAAAGAACTGAGCCCCCTTTCTGGGCGCATTTGCGCGCGGTG
GAACTGAATCTCTGTGTACAGGCGCTGTGCCCTACACCCCCAGGCTCCGCTGGTGCGCTC
GCGCTCACTCGCTTACCCCCCCCCCCCGCCTCCCAGGCTCCGCTAGTGCTCGCTCGCGCT
CTCTCTCTCTCTTTTTTTTTTTTTTTTACATTTGCACGGGATTGTGGGAGGAAGCGGAGC
GCAGCCAGACACCCCGCCGCCCGCCCCCCTTCCCCTCCCCCCTCCCCCTGCCGCCTTGTG
CAAAGATGGCTGCACCGTGAGCGCAGAGGAGGAGGAGGTGGCGGCGGCGGAGGCGAAAGA
GCGAGCACCCAGCGCCCGCACCCACTCCGGGGCCGTCCGGGACGCCCCCTCCGGAGCGCG
CGTCCCCTTCTCTCTTGCAAGCGCCGGGGCAAAGGCGGAGACAGCGGGGTCCCTCCTCCC
CCCTTTCCCTCCTCCAGGGGGAACCCCCCCTCCTTGGCTCAGCGGCTGCACCCCTCCTTT
GCCCGCCCCTCCGTCCCTGCCCCCTCCCTCCCCCGCCCGGGGCCTTCCCGGGTCTTCGGT
GGCCGCAAAGAAAAAAAAAGAGAAAGGGAGGAAAAAAAGCAGCGGAGGGAGCGGCGGCGG
AGGAGAGCGCGCGCGCTCCCCCTCCTTTCCCCCTCCCTCCCCCTCCCCCCAATTTCCACC
GCGGCCAATTCATGGACAGGAACTACCCCAGCGCCGGCTTCGGGGACCCGCTCGGCGCCG
GGGCGGGATGGAGTTACGAGAGGTCAGCGAAAGCTAGGTAAGGAGCTGAGGGGGACCTAG
AGAAATGGGCCAAGAGGTGGGGGGATTCCTGCCTGGCCTGGGCCTGGGGCCCGCTCGGCA
ACGCGTGCATCGCCAACTCCCCCTCCGATTTTTGCAAGGGAGCGGCCTTCTTTGGGTTTG
TAACAACGCCGCCGCCCCAGTTTGCAAATTGCAAACTCCG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCGCTGTTAATGATTGACAGGGATTCGGAGTGCGAAACCTTATCCTACCT CCCTCAGAACTGCAAATTTCTCCCACAAGAAGGAAACTTGGCGACGCGACCCCTCACCGC CTGCAGCTTACCTCAAGAGCGGTTATCCGGCTTGTCGTTGCTTCAACTACGTCCCGAACC GGAAAAAGAGTTCTGTTTTTAAACTCTACTCCTCCTACTTCCGCCCGACAGGAGGAGACC GGAAATAACTCTGCCCCTAGTCGCGGAGGCGCTTCGCCTGGCTTGGTAAGTGCTTTCTTC TTCTCTTCCATCCCCCCGGAAACGTGAGTGACTACTCGAAGGTTCCGGTGAGCGAAAGTG GTTTGACTCTGGGAGACACCCTAGCCTGTTCTAGGCATTACCCAGAGCGGGGCAGTTGCT TTGAGTCTCTTCAAGTTTGAGTTTGGAGACTTAACTCTGTCACCCGAAGAGACTGATATC CAGTTCCCCAAATATATTACTTATTTTTTCCCCCATTGCATCTTAAGAGTCGATAAGTGA GAACTCTTTCCCCTATTATAGAAAAAACAATTTTCAAAGATCTCGAGACTAAACTGTTCA AGTTATCCTCAGGAAACAGATTTATTGTGGTACCGCCCAGTTATTCTAGGAACCAAAGAA TTCCCTTCCCACCAGTGTGTAGATCTCTTGAGACCTAAGATTTATTTTCCTGGCTCTGCC AAGTCGTCTGTAGAGAGAGACTCGGGCTGGACAAGTAGGGAAGAGGAGACTCTAATAAAG CCCCCTAGATCCCTCCATGGTGTCGGAAAGCCTTGTTTCTTCTGTGTGGGGCCGTGGCAC TGAAGACCTTGATCCTATGGTCCCTTTAAGTACTTTGTCCCTTACCTGAGTCCCTCCCAA AGAAGGTAATCAGTAGCCCCGCCCCCTCGCCAGTAGCCGGCTCGGGCCTAGTAACCCAGG AGGAGCTCCCCTCCTCTCCTCCCCTCCCCTCTTGCCTACCCCTTTGCACA
1	EXON 1	45061588	45061652	-	-	65	GCTGGCTACTCTGACCCAGAGGGCCTTCGTTAAAGAAGAGAGGCAGAGCTCCCAGCCCTG GCCAG
	INTRON 1 - 2	45060893	45061587			695	GTAAGTGGGTGCATGCTCCCCGAGA..........TTACTTGCTTTTATCATGATGGCAG
2	EXON 2	45060741	45060892	-	1	152	AGTGCGGGCAGGGAGTCCTGGCCTCCTAACTCCGCTGCAGCATTTGTCATCTGGGAGTCC ACACAGTATGAGGGGCCGTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCT GGACACCTCACCTCACAGAGAGCAAAACCAAG
	INTRON 2 - 3	45060387	45060740			354	GTGAGTGTTTGAGTCTCTTCAAGTT..........CTGCTTTTGACTCTGATGTCCTTAG
3	EXON 3	45060205	45060386	1	0	182	TTCTTGACATCTTCCTGGATGCCCCAGAGGCCCAGAGTTTCTTAGTTGGCCGCAGGCGTT TTCCTCGTGCTAACCACTGGGACCTGGAGTTGCTGACCCCTGGGAACCTGGAACGGGAGT GTCTGGAGGAGAGGTGCTCCTGGGAGGAGGCCCGGGAGTACTTTGAGGACAACACACTGA CG
	INTRON 3 - 4	45060012	45060204			193	GTGAGGGCCTCAGAGGACCCTGGCA..........TTTTCCTTCTCTTCTCTAACCCTAG
4	EXON 4	45059972	45060011	0	1	40	GAGCGCTTCTGGGAGAGCTATACGTACAATGGCAAGGGAG
	INTRON 4 - 5	45056885	45059971			3087	GTGAGTGATGCTTCTCAGCCCTCTC..........AATCTCTGGCACCCTCTGCCCACAG
5	EXON 5	45056743	45056884	1	2	142	GGCGTGGACGAGTGGATGTTGCAGGCCTGGCGGTGGGACTGACCTCTGGGATCCTCCTCA TTGTCTTGGCCGGCTTGGGAGCCTTTTGGTATCTGCATTATCGACGGCGCCGCCTCAGAG GCCAGGAGTCCTGTCTGCAAGA
	INTRON 5 - 6	45054648	45056742			2095	GTAAGGAGTCCTCTAGGAGGAGGGG..........CTAACCACACTTTTTCTGTTTCCAG
6	EXON 6	45054519	45054647	2	2	129	GACCGGGCTCATCATCCCCTTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCCCCAGG CCTTCCCACCTATGAGCAGGCTTTAGCAGCCTCCGGGGTGCACGACGCACCTCCGCCCCC TTACTCCAG
	INTRON 6 - 7	45054198	45054518			321	GTATGAGGCGGGGCTTCTGCCTGGG..........CACTCCCAACCCCCATCCCCGATAG
7	EXON 7	45053613	45054197	2	-	585	CCTCAGAAGGCCTCACTGAAGACCTGCTTGCAGCGCGGGCTCCCTGAACTGTGCCCCTGA TTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTG GGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGTGTTTCCGCCGGGCACG CATACACGCACGTCCCTGACCATCCTGTTGCCGAGTTGGTGCCCCCGGCCCTCCAGTGAC CCCCCCCCACACTTCGTCTGAGCAGTGGCCCTGCCTCAGAATGGGCAGACCTTTTAGGAA ACTCGGATCAGACGTGACTCGGCTGTCACCCCACTGGTGCCGCGGGGCACGTACGCGCAG GGAACCAGGCCCTTGCACACGCCTGACTTCGTGTATTTCCCCAGTCGGGCACATGGGCGG TTTGTAATCCAGTATAAAGGTGGGGGGCGCATTTGCAATGTGCTGTAAGCGGGGTGTCAC GCTTGTGTTGCACCCGGGTAAATGGAGTTGATCTGAGCTGCCCTCTACTTAAAAACCCTT TGGGAAAGGAAGGGGGGATGGAAGAAATAAAAAATTGAAACAATG
	3' upstream sequence						AGAAAAAAATAAAAATGCAAAAGAACTGAGCCCCCTTTCTGGGCGCATTTGCGCGCGGTG GAACTGAATCTCTGTGTACAGGCGCTGTGCCCTACACCCCCAGGCTCCGCTGGTGCGCTC GCGCTCACTCGCTTACCCCCCCCCCCCGCCTCCCAGGCTCCGCTAGTGCTCGCTCGCGCT CTCTCTCTCTCTTTTTTTTTTTTTTTTACATTTGCACGGGATTGTGGGAGGAAGCGGAGC GCAGCCAGACACCCCGCCGCCCGCCCCCCTTCCCCTCCCCCCTCCCCCTGCCGCCTTGTG CAAAGATGGCTGCACCGTGAGCGCAGAGGAGGAGGAGGTGGCGGCGGCGGAGGCGAAAGA GCGAGCACCCAGCGCCCGCACCCACTCCGGGGCCGTCCGGGACGCCCCCTCCGGAGCGCG CGTCCCCTTCTCTCTTGCAAGCGCCGGGGCAAAGGCGGAGACAGCGGGGTCCCTCCTCCC CCCTTTCCCTCCTCCAGGGGGAACCCCCCCTCCTTGGCTCAGCGGCTGCACCCCTCCTTT GCCCGCCCCTCCGTCCCTGCCCCCTCCCTCCCCCGCCCGGGGCCTTCCCGGGTCTTCGGT GGCCGCAAAGAAAAAAAAAGAGAAAGGGAGGAAAAAAAGCAGCGGAGGGAGCGGCGGCGG AGGAGAGCGCGCGCGCTCCCCCTCCTTTCCCCCTCCCTCCCCCTCCCCCCAATTTCCACC GCGGCCAATTCATGGACAGGAACTACCCCAGCGCCGGCTTCGGGGACCCGCTCGGCGCCG GGGCGGGATGGAGTTACGAGAGGTCAGCGAAAGCTAGGTAAGGAGCTGAGGGGGACCTAG AGAAATGGGCCAAGAGGTGGGGGGATTCCTGCCTGGCCTGGGCCTGGGGCCCGCTCGGCA ACGCGTGCATCGCCAACTCCCCCTCCGATTTTTGCAAGGGAGCGGCCTTCTTTGGGTTTG TAACAACGCCGCCGCCCCAGTTTGCAAATTGCAAACTCCG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Prrg2 (ENSMUSG00000007837)
Transcript ID	ENSMUST00000007981

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 199 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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