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Target CDS Information

Gene Symbol (Gene ID) Tfcp2l1 (ENSMUSG00000026380)
Cross Reference
CCDS CCDS35691.1
EMBL AC109271, AC109294, AF311309, ...show all
Fantom F530007A16
GO GO:0000122, GO:0000902, GO:0002070, ...show all
goslim_goa GO:0000902, GO:0001071, GO:0003674, ...show all
MGI_trans_name Tfcp2l1-001
OTTP OTTMUSP00000067925
OTTT OTTMUST00000125185
protein_id AAI16664.1, AAK01150.1, BAE25632.1, ...show all
RefSeq_mRNA NM_023755.2
RefSeq_mRNA_predicted XM_006529961.2
RefSeq_peptide NP_076244
RefSeq_peptide_predicted XP_006530024.1
UCSC uc007cil.1
UniParc UPI0000564673
Uniprot/SWISSPROT Q3UNW5
Vega_transcript OTTMUST00000125185, Tfcp2l1-001
Vega_translation 180470, OTTMUSP00000067925
Definition protein_id:ENSMUSP00000027629
translation:
MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENGARLPPLQYVLCAATSPAVK
LHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEYQQLEGW
RWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPSKRASAFIQVHCISTEFTPRK
HGGEKGVPFRVQIDTFKQNESGDYSEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQ
EKEKYQPSYETTILTECSPWPDVPYQANNTPSPSYNGSPNSFGLREGNSSPNHPVEPLPL
GSDHLLPSASIQDAQQWLHRNRFSQFCWLFASFSGADLLKMSRDDLVQVCGPADGIRLFN
AIKGRNVRPKMTIYVCQELEQNQLPLPQKQDDSGDNSLCVYHAIFLEELTTLELTEKIAS
LYSIPPQHIHRVYRQGPAGIHVVVSNEMVQNFQDESCFILSTLKAESNDGYHIILKCGL

Chromosome 1
Length
Position(start - end)
49392
118628041 - 118677434
Orient to Chromosome plus
Link Location : (1:118628041-118677434)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tfcp2l1 (ENSMUSG00000026380)
Transcript ID ENSMUST00000027629
Reports
substitution
cSNPs4
Insertion38
Deletion64
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num4
non-synonymous num0
synonymous substitutions 118632353 (p.Ala58Ala), 118661997 (p.Asp262Asp), 118664780 (p.Pro294Pro), 118668718 (p.Gly394Gly),
non-synonymous substitutions
B6 transcript
(ENSMUST00000027629)
MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENGARLPPLQYVLCAATSPAVK
LHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEYQQLEGW
RWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPSKRASAFIQVHCISTEFTPRK
HGGEKGVPFRVQIDTFKQNESGDYSEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQ
EKEKYQPSYETTILTECSPWPDVPYQANNTPSPSYNGSPNSFGLREGNSSPNHPVEPLPL
GSDHLLPSASIQDAQQWLHRNRFSQFCWLFASFSGADLLKMSRDDLVQVCGPADGIRLFN
AIKGRNVRPKMTIYVCQELEQNQLPLPQKQDDSGDNSLCVYHAIFLEELTTLELTEKIAS
LYSIPPQHIHRVYRQGPAGIHVVVSNEMVQNFQDESCFILSTLKAESNDGYHIILKCGL*
MSMv4 transcript
MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENGARLPPLQYVLCAATSPAVK
LHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEYQQLEGW
RWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPSKRASAFIQVHCISTEFTPRK
HGGEKGVPFRVQIDTFKQNESGDYSEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQ
EKEKYQPSYETTILTECSPWPDVPYQANNTPSPSYNGSPNSFGLREGNSSPNHPVEPLPL
GSDHLLPSASIQDAQQWLHRNRFSQFCWLFASFSGADLLKMSRDDLVQVCGPADGIRLFN
AIKGRNVRPKMTIYVCQELEQNQLPLPQKQDDSGDNSLCVYHAIFLEELTTLELTEKIAS
LYSIPPQHIHRVYRQGPAGIHVVVSNEMVQNFQDESCFILSTLKAESNDGYHIILKCGL*
homology100.00 (480 / 480)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Tfcp2l1 (ENSMUSG00000026380)
Transcript ID ENSMUST00000027629
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CGACTTTCCAAAAGCCAATTATAAAGAACATCCAAAATCTTAAAGGAGCA
GAAAGGTGGCAGGCACAGCAGCACAGCACAGGTCCTTGCTGAGTTGCATAGCCAGACTCC
CATTGTAGAAGAAAAAGAAATGACTCCTGCAAGCTGTTTACACTGCACACACACTAAGGC
ACAGTGTCCTTCCCACACACACCCACCCACCCACCCACCCACACACAGAGACTTAAAAAC
AACCCTATTAAAGGAAGTGGAAAGAGAATCTTACCTCCCGTTGCCTCCCGTGTTTCTGAC
ACCTGGACACTTCATCCCATCTCCTAAACTCTTCTGCATGTCACACGAGCCCAGTTTGTC
AAAGAAGGACTGTCACAAACCTGTCTGAAACTTTCTTTTCTGATGCTTCCTAGGCTCATC
TGGACTCAGACTAAGGACTGATTCTGGGCTCTGAGTAAGAGGCCCAGGCATCTCTTTTAA
GTTTATTTTTATTATTTTATTTTATATACTGTGCAGCAGAAGATGACCTTGAATTTTGGA
TCTTCCTGCCTCTACCAGTGCAGGGATTAGAGACCTGTTGTACCACACCTGGGCTTAGAG
CTTTGTGTATGCTAGGTGACTTCATGTATGATATGCTCAGTGAGCTAGTCATGGAGTTAA
AGACAAGTAAAAGCAACAGAGAAAAAAGGGTATAAGGTCAGTGTTCAGAGCGAGGAAAAA
CAAAAACGTTAAGGGGAGTGCTTAGGTGCTCCTGGCCACAATCTCGCCCTGAGCAACTGC
CTTGGGCTCAGCGTGGAAGCTCAGAGGCCAGTAGGCCACAGCGAGAGTGGCTGTGTCCCC
AGGGTCAGTAGCTAAGCAAGTGCCAGCTCCCAGAAAGGCACAGCTCCGGCAGGTGCGGCT
CAGCGCCTCCCTCCGGCCGTGCTAGCCGTAGGGACGGCCCTGCAATAACCACGCCCCTAA
TGCCACGCCCACCTGACGGCCTATAAAAGGCGCCGGCCGCAGCCCACTCA
1 EXON 1 118627946 118628102 - 2 157
GGTTCGAGTGGGTGCTGCTTAAAGGTGGACGGCGGCCAGGGTTGCCGCGTCCAGCTCGGT
GCCACGCCCCGGCCGGTGCTGCGGAAGCCTCAGCCATGCTGTTCTGGCACACGCAGCCCG
AACACTACAACCAGCACAACTCTGGCAGCTACTTGCG
INTRON 1 - 2 118628103 118632241 4139
GTAAGACGTGGCAACACCTGCCTAC..........GACCACTGATTCCTGTGTTTTGCAG
2 EXON 2 118632242 118632393 2 1 152
TGATGTGCTGGCTCTGCCCATCTTCAAGCAGGAAGAGCCGCAGCTATCTCCTGAGAATGG
GGCCCGCTTGCCGCCCCTACAGTATGTGTTGTGTGCCGCCACCTCTCCAGCAGTGAAGCT
ACATGAAGAGACCTTAACATACCTCAATCAAG
INTRON 2 - 3 118632394 118652300 19907
GTAGAGGCCTCCATAGAGTTGTAAC..........AAAAGGTATTACCTTCTTCCCTCAG
3 EXON 3 118652301 118652377 1 0 77
GTCAGTCGTATGAAATCCGGCTGCTGGAGAATCGGAAGCTAGGGGACTTCCAAGATCTGA
ACACGAAATATGTGAAG
INTRON 3 - 4 118652378 118652868 491
GTGAGTAAGCTCAGGGCTGGCTCCT..........TGTCTCCAACATTTGCCTTCCACAG
4 EXON 4 118652869 118652974 0 1 106
AGCATCATCCGTGTCGTTTTCCATGACCGCCGGCTGCAGTACACAGAGTACCAACAGTTG
GAGGGTTGGCGGTGGAGTCGGCCTGGGGACCGCATCCTGGACATTG
INTRON 4 - 5 118652975 118653715 741
GTGAGTCTCCTCAGCCAGCACCAAC..........TTTGTGTATGTGTATGTGTGCACAG
5 EXON 5 118653716 118653822 1 0 107
ATATTCCACTGTCTGTTGGTATCTTGGACCCCAGGGCCAGCCCAACCCAGCTGAATGCTG
TGGAGTTTTTGTGGGACCCATCGAAGAGAGCATCTGCATTCATTCAG
INTRON 5 - 6 118653823 118656367 2545
GTAAGCAAACATGAGCGCTTTGGAG..........TTCAGGCCCCACATTCCCCTGGCAG
6 EXON 6 118656368 118656520 0 0 153
GTGCACTGTATCAGCACGGAATTCACCCCCAGGAAGCATGGGGGTGAGAAGGGAGTGCCT
TTTCGGGTGCAGATTGACACGTTTAAGCAGAATGAGAGTGGGGACTACTCGGAGCATCTA
CACTCTGCCAGCTGCCAGATCAAGGTGTTCAAG
INTRON 6 - 7 118656521 118659007 2487
GTAGGATGCACTTAACACAGCCACC..........TGGACCCTGTGTTCTGTGCTTGCAG
7 EXON 7 118659008 118659118 0 0 111
CCCAAGGGAGCTGATCGGAAACAGAAGACTGACCGGGAAAAGATGGAAAAAAGAACGGCT
CAAGAGAAGGAGAAATACCAGCCATCCTATGAAACCACCATCCTTACCGAG
INTRON 7 - 8 118659119 118661979 2861
GTGAGTGAGCCAGGGCTGAAGCTGA..........GCCTGTGTTGTGTCTCTTCCCATAG
8 EXON 8 118661980 118662071 0 2 92
TGTTCTCCATGGCCTGATGTCCCCTACCAGGCGAACAACACCCCATCCCCAAGCTACAAT
GGCTCTCCCAACAGCTTTGGCCTCCGTGAAGG
INTRON 8 - 9 118662072 118664758 2687
GTACGTCTAACCTTCCCCTCCTTGG..........ATCAACTGTCCCTTTTCCATTACAG
9 EXON 9 118664759 118664807 2 0 49
TAACAGCTCACCTAATCACCCAGTGGAGCCCTTACCCCTGGGCAGTGAT
INTRON 9 - 10 118664808 118664897 90
GTAAGTATGCATGGGTGTTGATTGA..........CTCCCTTTCTCTCAATTAATTGCAG
10 EXON 10 118664898 118664991 0 1 94
CACCTGCTCCCATCAGCCTCTATCCAGGATGCACAGCAGTGGCTGCATCGCAACCGCTTC
TCACAATTCTGCTGGCTCTTTGCCAGCTTCTCAG
INTRON 10 - 11 118664992 118666115 1124
GTGAGTGAGTATTGTAGATTCCTGG..........ATGAGTGGTACATGTCTCTGCTTAG
11 EXON 11 118666116 118666206 1 2 91
GTGCTGACCTCCTGAAGATGTCCAGAGATGATTTGGTCCAGGTCTGTGGCCCTGCAGATG
GGATTCGGCTCTTCAATGCCATCAAAGGCAG
INTRON 11 - 12 118666207 118668630 2424
GTAGGTGCAGTTTTCTTAGAGATGC..........CTGTGTCTCTGTCTCTCTCTGCAAG
12 EXON 12 118668631 118668734 2 1 104
GAATGTGAGGCCAAAGATGACCATCTATGTCTGTCAGGAGCTGGAGCAAAACCAACTACC
CTTGCCACAGAAGCAGGATGACAGTGGAGATAACAGCCTGTGTG
INTRON 12 - 13 118668735 118669388 654
GTGAGTGGAATAGAACCTCAACCTG..........AAGGCACTTGCTCCTCTCCCTGCAG
13 EXON 13 118669389 118669531 1 0 143
TATACCATGCTATCTTCCTGGAAGAGCTGACTACCCTGGAGCTGACTGAGAAGATCGCCA
GCCTGTACAGCATCCCCCCACAGCATATACACCGCGTCTATCGACAGGGTCCCGCTGGCA
TCCACGTGGTGGTAAGCAATGAG
INTRON 13 - 14 118669532 118675574 6043
GTGAGCTGACCTGGCCCTCCATAAG..........AACATGTCTTGCCTTTGCCTTTCAG
14 EXON 14 118675575 118675626 0 1 52
ATGGTTCAGAATTTCCAAGATGAGTCTTGTTTTATCCTCAGCACATTAAAAG
INTRON 14 - 15 118675627 118677387 1761
GTAAGCCTCTCTCTGCCTTCCTGAT..........CCCATGCCCAGTGTTTCTCTTGCAG
15 EXON 15 118677388 118685168 1 - 7781
CAGAAAGCAATGATGGCTACCACATCATCCTGAAGTGTGGACTCTGAGCAGCAGCGCCTG
CACCTGTCCCCTGCCCCGTGGACCCCTGGCCGTGAAAGGTGCACCACTGTCAGCTGCTGT
CTCACCTGACAAGCTCAGACTAGGAGGGACTCTACCCAGACCAGGAAAGCTACAGACAAC
CGTGGACACAAAGTCTGATGTACAGAAGAAAGCCAGCGGTTCCCTTCTCCTTTCCTCTTG
GCTTTTAGGTTTTTAAGTTTCTTGTTCTGTTTCCTGGGCAGATAGTGGGGATGTGCATCT
CTTAAACTCTGAGCCCTGCAGTTGGAGGGTCCTTTGATGTATTGGTCCTTCCTGTCTCCT
CTCTTATGTCACCCTGATTCCTGCTTCTTCTTCTTGAGTCACTGGCTTCATGGCTAGTTC
TGCCAACCTCACAAGGGCTCCACACACAGTTCTCCTCTTAATACTGACTTCCTTTCTCAG
GACCCTGGTAGCCATGTCTCTCCTGTTCTTGGATGACTTGATAAGACTGGAGCTATTTAT
TTGTGCCTTCCATTTCTTTCTCAGTCGCCTTGTCTCTAAGGATCTGCTACATTCAAGCCC
AGAGTCTCTGCATTGACATGGTAGATGGCACAGTGTACCTATGTGACCTCTCATTGTGTA
TTAGTTCCTTTTCTGTTGCTGTGATAAGATACTCTGACAAAGGCAACTTGATAAAGAAAG
GGCTTGTTTTGGCTTAGAGTTTTGTAGGGATTATGGTGGATATTATGGTGAGGAAGGTGC
TGAACAGAAAGCTAGCTGATCTCATTTTCATACACGTAGGAAGCAGCACAGAGAGAAAGA
GCAAGAACAGGAAATGGTACAAGCCTTCAAGGACCACCAACCCCAGTGACTTACTTCCTC
CAGCAAGACTGCATCCTCTAAATGCCCCATAATCTCAGCAGACTACATCACCAACAGGGA
CCACCTGTTCAAATACATAAGCCCATGGGATACATTTCTCATTCAAGCCACACATTTTGC
CCATGTGACCTCCCACATTTTCTAGTTAGAGATGCTATGGACTAGGAGATGACATGTGAC
TTCCTCACCAGGGAAGAGAGGTGAGGACAGAATGATTCCTCTTGGACCACTACTGTGTAT
TCTCATTTCTGTTGAGCAAAGAGTACTAAGAGGTGAAGATTCTGTTATCCAGTGGCCTTG
ACCATCCATTCTAGACATTTGGGTTGGGGTATGTCTCAGTAGATCCCTCCCTGGCAAGTA
TGAGGCCCTGGGCACCATCCCAGCGCTACAGCAGGAGGTACTTACTGAATTCTCTTTTTC
AGACAACCTCAGCTAACCACTGCTGTTTGCCAAGTGGCCCAGGGGTAGTATGGTGTTTTT
TTCATTGCTCACTTAAGATTCTATCGTAGGTATATAGATAGGTGCTTTGTCTTTGTTGGC
ATGGTTGAATTGTTCACTTTTTTTGTTTGTTTTGTTTTTTTCAAGACAGGGTTTCTTTGT
TAGCCCTGGCTATCCTGGAACTCACTCTGTAGACCAAGCTGGCCTCGAAATCCGCCTGCC
TCGGCCTCCCAAGTGCTGGGATTAAAGGAATGTGCCACCACTGCCTGGCTTGTTCACCTT
TCTTAACTCTGGGGGAATTTGAGGATCAGTAGCTATGGTAGACTTAATTCATCTTTATTA
TGCCCACCCAGTGCTTCAACTCTTTCCTAATCCTCAAGCCATAGTCAGTTACTTCTAAGT
TCAAAGATTTGCCAAAGGTTTTGGCAAATATTATTTTACAGGCAGAAAAACGACTCTCAC
AGGAAAGATGAGCTCTCAGTTCCTTGTCTTTTGAGACATGTGGGTGGGGTTGACAGCTTT
ATTGAGATGTTGGTGTTGTGAATATATTGGCACAGGCTTTCTGTGGACAGGGTTTCATTT
TGGGAATGTGCCTGGTAGAATGGACAGCTCATAAGGTAACTTTTCACCGGTTTGAGAAAC
TGCCCAGTGTTTCCCACGCAGCTACACGTGTTTGTATTACCACCAGCAATAGAGGATGGT
TCTAGTTTCTCCACCTCCTCATCAACATTTGCTGTGATTTCTCATTCTTGCCTGCCTGTC
CTCTCTCCCTCCCCCTTCTTCTTCCGTATAGTCCAGCCTGGCCTCGAAGTCCCTAAGTAG
AAGAGGATAATTGAACGTCTGATCGTCCTGACTCTGCTTCCTAAATGCTAACAACATAGA
AAAGTACCTCCACACCTAATGTATGCGGTGCTGGGACAAAATCCAGGGCTTTGTGCTTGC
TAGGCAAGAGCTCTCTCTACCAGCTGAGCCACCTCCCTAGTGGTGACCTGTCTTTTATTA
GAATATCCTGCTGGTGTCATGCATGTCTCTGGCTAATGATGTTCAATGTCTCTTCACATT
GATTGGCCATTTGTATATCTTTGGGAAAATGTCTGGTTATGTCTTGCCTGTTTTTAAATT
GGGCTCTCTTCATTGAATTGTACAAGTTGTTGATGAAAATCCTTCATCAGTTTTTCTCCA
TTCTGCTCCATTCTGTAGGCTGTCTTCACCCTCTTAATGGTTGATGCTCCTTGGGGTGTA
CATGTTTCTAAATTGGTTGTGCTTAGTAGTATGAACCAGCACTCCCAGTACTCAGCTGAG
GCTCCCGAGGCCAGCCCAACCTACATAGTAAGACCCAGTCTCAGAAACAATTGTCATCAT
TATTTTAATGTGTGTGATGCCTGAGTTACCTCCTGCTGATTGTAGTTTTGATGTGGATAC
TAAGAAACCATGACCTAATGCAAACTCGGGAAAATCTGTGTTTTCTCCTTAGAATTAAAA
ACACTGTTTATTTTTATTTTATGTGCATTGGTATTTTGCACATTGGTATAGTATGTGTGG
TTGTGTGTGTGTGTGTATATATATATATATATATATATATGTATATGCACACATACACAC
AGATCCTTGTAAGGGTGTTAGATCTTCTAGAACTGGAGTTGCAAGCATGTGTGAGCTGCC
ATGTGGGTGCTGGGAATTGAAGCTTGGTCCTTTGGAAGAGAAGCCAATGCTCCTAACCCC
TGAACCATCTCTCCTGGTCCCTCTTAGGAACATGATTAAAGTTTAGTTGTTACAATGAGT
TCTGCTCCAATCTGAGTTAGTTTTACATATATGATATGTAGTGGGAGAGTCTAGTTTCAT
CCTTTTACATGTGAGCATCTACTTATTTTACCCCTAATTACTGAAAGGACTGGAGCTTCT
GTAGTCTGGAGACCTCTGATTCCTGGATCTTTGTGAGCACGGCTGGACCATTGCTGATCT
CTTGTTCCTTTTACCTTCTTGGTCTGCATTTGGGTCTACTGCTCTTACGGCCACCTCCCT
CCTCTCCTCCTGTCAGCAGGACTGGGTGATGCCCCTCTGTTCTGTCGTTTTTCCTGGCAC
TAACACTTCCTAGTTCTAGAGGAAGGTAATGACCAAACGTTTCCCAAACGTTTCCATACT
TGGATAGAGAGGCAACCGAGTCACTTAGAATAATATGCTCAAGGCCAGCCACTGGGAGAA
ACAGGACTAACTGGGCCTCTGACTTTCAGCCCATCAGGCTATCTGTGGCCTCTGTTCCCA
AGTGATAGCTCTACATGGGCTAAAGGAAGAGAGACTAAACTGATACCTTTTTTTTTTCTC
ATACCAAAGTCGGTCTAAACTGGAGAGCCAAAGATGGCACACTGTAAAAAGAGCAGATGG
CATGGAATGTTCCAAGTCTTGTCTTGGGGTCTGAATTAGTTATTTTTCTCATTGTTGTGA
AAAACATCTGACAAAAACAAAACAAAACAAACAAACAAGCAAAACAAAACAAAACAAAAC
AAAACTTACAGGAGTGAGGGTTTCTTTCTGGCTCACAGTTTGAAGGTCCAGTTTGTCGTG
GCTGAGAAGTCTTGGCAGCCAGAGCATGGGACAGCTGGAAGCAGAGGCAGATGGATACAA
TGTTTATCTTACCATCTCTGTTTTTTTAGTCAGGGTTTCTATTCCTATACAAAACATCAT
GACCAAGAAGCAACTTGGGGAGGAAAGGGTGTATTTAGCTTACACTTGCACATTGCTGTT
CATCACCAAAGGAAGTCAGGACAGGAACTCAAACAGGTCAGGAAGCAGGAGCTGATGCAG
AGGCCGTGGAGGGATGTTCTTTACTGGCTTGTTTCCTTATAGAACACAGGACTACCAGCC
CAGAGATGGTCCCACCCACAATGGGCCCTCCCGCCTTTGATCACTAATTGAGAAAATTCT
GGATCTCATGGAGGCATTTCCTCAGGGGAGGCTCCTTTCCCTGTGATAACTACAGCTTGT
GTCAAACTGACACACAAAACTGCTACTATACCTTTTTACTCTGCAAAACTTCAGCCATGA
AATGCTAGGGTAGGTTTTCCCACCTCAGATAACTAATCTAGAAGACTCCTCACACACTTG
CTTGGCAGGGGAGAGTCCATGATCAAGGAGCTGGTCTTTCCTGGGTAATGCTTATTCTTT
GCAGTCTGGATGTGCTTGACTGAGTAATTTTTGGTAGTGGGGGAATGTATTCTTGCTCCC
GATGAGTGAATTAAAGGAATAGAAAAGAAACTCACTGGCAGACATAGTCAGAGGTTTGTT
TCCATGGTGATACTAAGTCCCATCAAGTTGACAATCAAGATTAGCCATTGTGGGGGTCTA
GAAAACAGTCAGACATTGCCCTAGTGACCTCTTACCCAGTCTGCCTGGAGCCCCTTGAGA
GCTATTAACCAGGAAAAGGCTAGAACCCATAAGCACGTCACCAGTTCCTAAGTCCAGTGT
TGCTTCAGGGGCTGGCCCAAGTAGCTGGAGTTCTGAAAATTATTAACACATCAGTGGAAG
AAATAGAAAGACTCTTTAGCTGTTGTCAGTGGAAAGTTGAGGTTGTTGGGGGCAAGGGGA
ATTGAATATGGTCACTGCCTTAGGTACACTGGAGGGACAGGACCAAAAGTCAAGGGTCCC
AGGCTCCCTTTAATACAAGGTGAACAGTAGACCATTAGTAGAGTGTCCCTGTGTTTGAAT
GGCAGAACTGCCCCCCTAAAACAAGAAGCATTGATCTGGAGACCTGAGAACCTGGAAACT
AGTCAGTAGGTGAATCTGAGCTTCGGGAAAACTTTACCATTGTTTCCCATTCATCAAAGT
CATGTGGTGGACAGGTGACCTTTGCTTGTCCTCGGTATTCAGTGCCACCAGTGCTGCTGC
AGCTGCAGGTAAACCCGAGTGGATGGATGCCTGCTCACCAAGTCCCAGGCTTTCCCTGAC
TGCAGCTAGGTGAGTGCAGGTGTGTAGGTGTGGGCCTCAGTGATGTGCTGCTATCTGCTG
TCATCCGAGCCAGTCTACTTGGCCAGTATAGAGTGTTCTTTTCTCTTTCCTCTTCCAATC
TCTTTGTCCTTTGAAGATAGGACTACTGGGCCCAAAGAGCAGTGAGACTCTGGGAAGTAC
CCAGACTCCTTTCCCAAGGCCAGCTCTCCTTAGCTGCTTCTCAGCCTCAGTAGGAGTCTC
TGAGCCCCTGCAGGCACTGCTGTAAAGGGTCTCTAACCTGGGCCTTCAGGCTGTTCTAAG
GACTGGAGTGAAGAGGTCTGTGTTCCCTTCCTTCCAAAGAGTGCCCTCCCTTTATATTTG
CAGACAGGAACTAAACTCAGTGCTGTCCACTGGTTTTGCCATCATTTAGTTACTAGAGAG
CATTATCTTCAAACCTAGTTCAGGGAATGATAGCCTTGCCATCAAAAATTACACTAAATT
ACTGTATTGGATTGCTTGTGTTAAATTATGCAGGACTGTGGTGGGGCTCGATGGCCGAGC
ACTTGCCAACTGTGAGCAAGGTTCTGAGTTCTATCCCTAGTACCATAAAACCAATAACAT
TGTGGAGAGCTGGGTATGGTGGTGCAAACCTGTAATCCCAGTACTCAGGGCAATGCTGTG
GCCGGGGAGTAAACGAAGGGTGACTGAGTCTCAGGCCAGTCTGGACTATTAAAAGTTGTT
TTCTCTTGTGCCAACATACTTAATTTTACCTCTTTGCCCTTAAATACTGAAATATTTACT
CCCCAACTCCTTTTTTTTTAACATTTTAATGTATTTTATTGTCTTATTTGTCAGTGGTAG
GGAACAGACCCAGAATTCAGGGCCTCACACATGTGAGGCAGGTGTTCTACCACTGAGCTA
GCCCCTAACCTCAGCAGCCTTCTCTCTCCTTAGGATTACTTAGGGCACTCTCAAGCATTA
AGGGCTATCTTTTTTTTTTTTTTAAATTAGGTATTTTCCTCATTTACATTTCCAAGGGCT
ATCTTAACAATGCATTTTGCATAAACTTAGGAGAAGTAGAAGGTGCAGTCAGAAGTCTGG
AGAGTTCCTTGCCTTCTGTGTATCTCACTTCTGGAAAGTTCTGATCCTCACTTGGCTCCC
AGGGACTATGCCCAGCCTTTCCATGAGAGAGAGTACAGAGGTCTCTTCCTCAAACGCTCC
TGTTACCTGGAACCCTGCTCGGCCTTTGTCCTGGTCCTCTGGTCAGGGTTTGATAGAAGA
AAGGACTTTTGTGCTGTATTTATGGATTACCGAGCTGTAGTGGGTAGCAGTGGCCTGAGG
CGCCTACTAGAACCTGCCTGGAAAGGACAGACTGATTTCAGCAGGTGTCTTGAAGACTAA
ACCCCTGTTAGCTTAGCATCCCTGGAGCCTACAGACCCCTCCCCATATATGCTAGACCCT
TCCTGTGTGGTTGTGATTTCTGGGCAGCTTCCTGCCTTCCCTGGACCCAGATTTCTACAG
TACTTGTGGGGCAGAGTGTGGTGTTCCCCAGGGATGTTCATCTTTCATAGCTTGTCTATC
TGTAGACGCCCCCTCCCCTGTCTTCTGCATCCCCTTGCATCCTGCAGCCACTCCAAACCT
GTCTATCCTATATTCCTCATTGACCTGCTTCTCATGGAGTTTTTATCTCAAGCCCTCTGC
CCAGGTTTCTAGCTGGGGAAAACATTGAAAAATGAGAGACAGACTGGGTCCTTAAACTAC
AGGAAGTTACACATCCTGTTTTCCAAATCCAGAATTCTATACCTGACTGCATGGAACGGG
TCACATTCAAAACATGGATATGCTACAAACAAAATTACCCTTGGGTCATGTGTACAGCAT
ATGCAGAAACACAAGTGGATCTTGTGTGTGTGTGTGGATGTAAACCCCATCCCCAAGATA
ACTCTATTACATTTGTATGTATTGGTAGTTCAAGATCTCAACCCGCCCAGGTAGAGGCTT
GTTTATCTAGGATATTCAACCTTCCGTGGACTGAGCCAAGTCCTACGAAGGCCACATCTG
TGAAGTACGTGGACAAGCTTCTTCCCACGTGGCTGCCCTGAGGCTTTGTCACTGGGCTGA
CGGAACTACGGGAGAGAGCTTTGTGGGGCTAGTATTAGAGACAAGCAAAGGGGGACCATT
TCAAGCACTGACCTATCTCTTCCTGCTGGGTAAAGTCTTGCTTACTTACCATGTTCTTTC
ATGCTTTGAAGTGATTCTTTCTTGAGGTTTTCTCACCTGCCTTTTTCCTCTAGGTGGGGT
GATTCTTTTCTAAAGGTGGTAGGGTTTTTTAGGTGGCAGTCCAGACTGGTCAAATATGTG
TGGCAGGTCACGGGAAAGGGGGTCATGGAAACCCACGTTGTCATAATGCCATGTTGTTTT
TGTACCTGAAATAAAGCATATTTTGCACTTGTAAATGAAAAATCTGTATGTGGGCTCTGT
GCTGGGTCAGAATGCAAATAAAACCATTTGTACTAAACCCA
3' upstream sequence
TGTGGCTGAAACCTCAACTTGCTTTGTTTATTGAACTGTAGCAAATGAATTTACTACTGT
AGAGTATTGGGAGACACAGCTCAGTGGCATTAGGAACACGCACACACTGCCCCTATGCTC
CGTCTGTGGTGGTCTTTCCATCTTGCAGAACTGAAACCCTGCTGCCTTATTAAACATGGC
TCCGCAGTCCCTTCCCCCAGCCCTTTGCAGCTACCACCTACTTTGTGTCAATTTGAAAAT
GAGGGGCTTCACTTAAGTGAAATTCAGTATATGTCTGTTGTAGGAGATTAAGTTACAGTA
TGTGTTAGGATCTCCTCTGTTTTAAAGCTTAGGGATACTCAGCTGGGTGGCTGGGCCATG
TATGTGTCTGTTCACTCTCATTGATCACAGTCTCCCCCCATCTGTGACCATCAACTCTGC
AGATTCCAAAGGCCCTAGTTTTGATTCCTATAATTTCAGCAGTGAGGAGCAGAGGCAGGA
GGGTGAGAAGTTCAAAGTCATCCCTGGCTACACACCAGGACAGGCCAGCTTCCTTAAATG
ATACACTGTCTCAGAAACCAAAAAGTGACACCCGGGGTCCCTGCAGAGTCATCTCTTTGG
ACCCTACAGACCTCTGGTGTCCAAGGTTTGACCTCAGCACCCCACTCCCCTGGTACCTCC
TGGACCTGCACCTATGCTGACCTTGCTGATGGCCCCTGTTGGTGACTGGGAAGGCCTGTG
ATTTCCTGCTACCCCGTGTCCCTGACACAGGGATCTTTTCCCTCCCAGAGAAGTGTGGAA
CTTGCAGAGCTAGGTTAGGAAGGTCTAGCTTAGACACCATGACATGTCCTCTTGTCTTAT
TAAGTCTTACATCTGCTATTTTATTATAATTATAAATTTCTGCTTCAGATTGTCCGATGA
AAATGTATTATTTTTAGCTCTGGCACTTTCCCCATGGGGTTCCCAATCTGACTATGGTTA
TTCTCTAGAAAACCTCTCTTCCTAGGGCTTAGGACATAGA..........

Sequence Detail Report

Gene Symbol (Gene ID) Tfcp2l1 (ENSMUSG00000026380)
Transcript ID ENSMUST00000027629
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 480 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information