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Target CDS Information

Gene Symbol (Gene ID) Rreb1 (ENSMUSG00000039087)
Cross Reference
CCDS CCDS49238.1
GO GO:0000122, GO:0000979, GO:0003700, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Rreb1-201
RefSeq_mRNA NM_001177869.1
RefSeq_peptide NP_001171340
RefSeq_peptide_predicted XP_006516817.1, XP_011242643.1
UCSC uc007qdb.2
UniParc UPI000058A46D
Uniprot/SWISSPROT Q3UH06
Definition protein_id:ENSMUSP00000049265
translation:
MTSNSPIGLEGSDLSSINTMMSAVMSVASVTENGGSPQGIKSPMKPPGPNRIGRRNQETK
EEKSSYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHACSICGKSLSSASSLDRHMLVHS
GERPYKCTVCGQSFTTNGNMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAES
EDPGPAKKMVEDGQSGDLDKMSDEIFHCPVCFKEFVCKYELETHMETHSDNPLRCDICCV
TFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQAWC
ETNLRRCISEQHRFVCDTCDKAFPMLSSLILHRQSHIPADQGREKLQTKTLAAESLEQKA
FLALLGLQHTKDVKPAPAEELLPDDNQAIQLQTLKYQLPQEPGCPTVLSVSPLDAASLGG
SLTVLPATKENMKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMAASAPP
QISLPPLSKAPATPLQAIFKHMPPLKPKPLVTPRTVVAASTPPPLINAQQASPGCISPSL
PPQSLKFLKGSVEAVSNVHLLQSKSGIQPSTTTQLFLQQAGVELPGQPEMKTQLEQESII
EALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRKVLYPCRFCNQVFAFSGVLRAHV
RSHLGISPYQCNICDYIAADKAALIRHIRTHSGERPYICKICHYPFTVKANCERHLRKKH
LKATRKDIEKNIEYVSSPTAELVDAFCAPETVCRLCGEDLKHYRALRIHMRTHCSRGLGG
CHKGRKPFECKECNAPFVAKRNCIHHILKQHLHVPEKDIESYVLATNSGLGPADTPTDAA
SRGEEGSCVTFAECKPLATFLEPQNGFLHSSPTQPLPSHISVKLEPASSFAMDFNEPLDF
SQKGLALVQVKQENVSSLLTSSSSSALYDCSMEPIDLSIPKSVKKGDKDTVVPSDAKKPE
PEAGQAEPLSPRPPPCPTLSVTVEPKGSLETPTGTVVAVTTAAKLEPHTQPLQGSVQLAV
PIYSPALVSNTPLLGNSAALLNNPALLRPLRPKPPLLLPKPSMTEELPPLASIAQIISSV
SSAPTLLKTKVADPGPSITSSNTVATDSPGSSIPKAAATPTDTTSSKESSEPPPAASSPE
EALPTEQGPAATSSSRKRGRKRGLRNRPLPNSSAVDLDSSGEFASIEKMLATTDTNKFSP
FLQTAEDDTQEEVAGAPADQHGPADEEQGSPAEDRLLRAKRNSYANCLQKINCPHCPRVF
PWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCSLRRNGLIPPKES
DVGSHDSTDSQSDTDTLTTPGEVLDLTAQAKEQPPAEGASEISPASQDLAIKEAKAAAAP
SEEEEEKETEENPEPEEECRVEESTGAADAPEEDTASNQSLDLDFATKLMDFKLAESEAG
SVDSQGPAQQEPKHACDTCGKNFKFLGTLSRHKKAHSCQEPKEEEAAAPSLENEGVGRAV
EGPSPSPEPEEKPAESLAIDPTPGTREASVAKQNEETEGPTDGEGTAEKRGDGDKRPKTD
SPKSMASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRH
QRIHQKARHSKHHGKDSDKDERAEEDSEDESTHSATNPASENEAESAPSTSNHVAVTRSR
KESLSTSGKECSPEERAAAEQAAEPSAPKEQASPGETDPQSPAAIVQDLLELCGKRPAPI
LAATDGASQLLGME

Chromosome 13
Length
Position(start - end)
55300
37893814 - 37949115
Orient to Chromosome plus
Link Location : (13:37893814-37949115)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Rreb1 (ENSMUSG00000039087)
Transcript ID ENSMUST00000037232
Reports
substitution
cSNPs28
Insertion67
Deletion54
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num16
non-synonymous num12
synonymous substitutions 37893870 (p.Thr19Thr), 37899704 (p.Arg114Arg), 37916115 (p.Lys173Lys), 37916482 (p.Gly196Gly), 37929890 (p.Leu408Leu), 37929926 (p.Gly420Gly), 37929974 (p.Ser436Ser), 37930097 (p.Ser477Ser), 37930106 (p.Pro480Pro), 37930403 (p.Gln579Gln), 37931105 (p.His813His), 37931369 (p.Ser901Ser), 37931411 (p.Val915Val), 37931540 (p.Lys958Lys), 37946933 (p.Pro1354Pro), 37946981 (p.Ala1370Ala),
non-synonymous substitutions 37930410 (p.Val582Met), 37930548 (p.Pro628Ser), 37931220 (p.Ala852Thr), 37931388 (p.Val908Ile), 37931661 (p.Val999Ile), 37941677 (p.Ser1320Gly), 37946967 (p.Ser1366Pro), 37947070 (p.Arg1400Pro), 37947283 (p.Arg1471His), 37947400 (p.Glu1510Val), 37948817 (p.Thr1656Asn), 37948985 (p.Ala1712Val),
B6 transcript
(ENSMUST00000037232)
MTSNSPIGLEGSDLSSINTMMSAVMSVASVTENGGSPQGIKSPMKPPGPNRIGRRNQETK
EEKSSYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHACSICGKSLSSASSLDRHMLVHS
GERPYKCTVCGQSFTTNGNMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAES
EDPGPAKKMVEDGQSGDLDKMSDEIFHCPVCFKEFVCKYELETHMETHSDNPLRCDICCV
TFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQAWC
ETNLRRCISEQHRFVCDTCDKAFPMLSSLILHRQSHIPADQGREKLQTKTLAAESLEQKA
FLALLGLQHTKDVKPAPAEELLPDDNQAIQLQTLKYQLPQEPGCPTVLSVSPLDAASLGG
SLTVLPATKENMKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMAASAPP
QISLPPLSKAPATPLQAIFKHMPPLKPKPLVTPRTVVAASTPPPLINAQQASPGCISPSL
PPQSLKFLKGSVEAVSNVHLLQSKSGIQPSTTTQLFLQQAGVELPGQPEMKTQLEQESII
EALLPLNMEAKIKQEITEGDLKAIMTGPSGKKTPAMRKVLYPCRFCNQVFAFSGVLRAHV
RSHLGISPYQCNICDYIAADKAALIRHIRTHSGERPYICKICHYPFTVKANCERHLRKKH
LKATRKDIEKNIEYVSSPTAELVDAFCAPETVCRLCGEDLKHYRALRIHMRTHCSRGLGG
CHKGRKPFECKECNAPFVAKRNCIHHILKQHLHVPEKDIESYVLATNSGLGPADTPTDAA
SRGEEGSCVTFAECKPLATFLEPQNGFLHSSPTQPLPSHISVKLEPASSFAMDFNEPLDF
SQKGLALVQVKQENVSSLLTSSSSSALYDCSMEPIDLSIPKSVKKGDKDTVVPSDAKKPE
PEAGQAEPLSPRPPPCPTLSVTVEPKGSLETPTGTVVAVTTAAKLEPHTQPLQGSVQLAV
PIYSPALVSNTPLLGNSAALLNNPALLRPLRPKPPLLLPKPSMTEELPPLASIAQIISSV
SSAPTLLKTKVADPGPSITSSNTVATDSPGSSIPKAAATPTDTTSSKESSEPPPAASSPE
EALPTEQGPAATSSSRKRGRKRGLRNRPLPNSSAVDLDSSGEFASIEKMLATTDTNKFSP
FLQTAEDDTQEEVAGAPADQHGPADEEQGSPAEDRLLRAKRNSYANCLQKINCPHCPRVF
PWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCSLRRNGLIPPKES
DVGSHDSTDSQSDTDTLTTPGEVLDLTAQAKEQPPAEGASEISPASQDLAIKEAKAAAAP
SEEEEEKETEENPEPEEECRVEESTGAADAPEEDTASNQSLDLDFATKLMDFKLAESEAG
SVDSQGPAQQEPKHACDTCGKNFKFLGTLSRHKKAHSCQEPKEEEAAAPSLENEGVGRAV
EGPSPSPEPEEKPAESLAIDPTPGTREASVAKQNEETEGPTDGEGTAEKRGDGDKRPKTD
SPKSMASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRH
QRIHQKARHSKHHGKDSDKDERAEEDSEDESTHSATNPASENEAESAPSTSNHVAVTRSR
KESLSTSGKECSPEERAAAEQAAEPSAPKEQASPGETDPQSPAAIVQDLLELCGKRPAPI
LAATDGASQLLGME*
MSMv4 transcript
MTSNSPIGLEGSDLSSINTMMSAVMSVASVTENGGSPQGIKSPMKPPGPNRIGRRNQETK
EEKSSYNCPLCEKICTTQHQLTMHIRQHNTDTGGADHACSICGKSLSSASSLDRHMLVHS
GERPYKCTVCGQSFTTNGNMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLSHDAES
EDPGPAKKMVEDGQSGDLDKMSDEIFHCPVCFKEFVCKYELETHMETHSDNPLRCDICCV
TFRTHRGLLRHNALVHKQLPRDAMGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQAWC
ETNLRRCISEQHRFVCDTCDKAFPMLSSLILHRQSHIPADQGREKLQTKTLAAESLEQKA
FLALLGLQHTKDVKPAPAEELLPDDNQAIQLQTLKYQLPQEPGCPTVLSVSPLDAASLGG
SLTVLPATKENMKHLSLQPFQKGFIIQPDSSIVVKPISGESAIELADIQQILKMAASAPP
QISLPPLSKAPATPLQAIFKHMPPLKPKPLVTPRTVVAASTPPPLINAQQASPGCISPSL
PPQSLKFLKGSVEAVSNVHLLQSKSGIQPSTTTQLFLQQAGMELPGQPEMKTQLEQESII
EALLPLNMEAKIKQEITEGDLKAIMTGSSGKKTPAMRKVLYPCRFCNQVFAFSGVLRAHV
RSHLGISPYQCNICDYIAADKAALIRHIRTHSGERPYICKICHYPFTVKANCERHLRKKH
LKATRKDIEKNIEYVSSPTAELVDAFCAPETVCRLCGEDLKHYRALRIHMRTHCSRGLGG
CHKGRKPFECKECNAPFVAKRNCIHHILKQHLHVPEKDIESYVLATNSGLGPADTPTDAA
SRGEEGSCVTFTECKPLATFLEPQNGFLHSSPTQPLPSHISVKLEPASSFAMDFNEPLDF
SQKGLALIQVKQENVSSLLTSSSSSALYDCSMEPIDLSIPKSVKKGDKDTVVPSDAKKPE
PEAGQAEPLSPRPPPCPTLSVTVEPKGSLETPTGTVVAITTAAKLEPHTQPLQGSVQLAV
PIYSPALVSNTPLLGNSAALLNNPALLRPLRPKPPLLLPKPSMTEELPPLASIAQIISSV
SSAPTLLKTKVADPGPSITSSNTVATDSPGSSIPKAAATPTDTTSSKESSEPPPAASSPE
EALPTEQGPAATSSSRKRGRKRGLRNRPLPNSSAVDLDSSGEFASIEKMLATTDTNKFSP
FLQTAEDDTQEEVAGAPADQHGPADEEQGSPAEDRLLRAKRNSYANCLQKINCPHCPRVF
PWASSLQRHMLTHTGQKPFPCQKCDAFFSTKSNCERHQLRKHGVTTCSLRRNGLIPPKEG
DVGSHDSTDSQSDTDTLTTPGEVLDLTAQAKEQPPAEGASEISPAPQDLAIKEAKAAAAP
SEEEEEKETEENPEPEEECPVEESTGAADAPEEDTASNQSLDLDFATKLMDFKLAESEAG
SVDSQGPAQQEPKHACDTCGKNFKFLGTLSHHKKAHSCQEPKEEEAAAPSLENEGVGRAV
EGPSPSPEPVEKPAESLAIDPTPGTREASVAKQNEETEGPTDGEGTAEKRGDGDKRPKTD
SPKSMASKADKRKKVCSVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRH
QRIHQKARHSKHHGKDSDKDERAEEDSEDESTHSANNPASENEAESAPSTSNHVAVTRSR
KESLSTSGKECSPEERAAAEQAAEPSAPKEQVSPGETDPQSPAAIVQDLLELCGKRPAPI
LAATDGASQLLGME*
homology99.32 (1755 / 1755)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Rreb1 (ENSMUSG00000039087)
Transcript ID ENSMUST00000037232
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CCCCGTGAGATGCTCAAGGATAGCTACGTGGTACACTTACGCACCTTGTT
TGTTTCCAGATGCTCTGAGAAAGGAAGAAGTGAGAAACTGCAGGACAGCTGCACCTCAGC
ATCCTTGCTTATGTGGGACCTTTCTTTCTCCTCTTTCTGTGGTGCCGTTGGGGAACCTGG
AGCTCACTTCTGTGCGTGCCAGGCAGATGCTGGCTCTCCGAGCTATGTGCCAGCCCTTCA
GCTTCTTAAGTCCTGTCCCTGTATTGCAACCTTCGTTGCTGTGTTGTGGCTCCAGAACAT
GCTGCATGCCCCCTTCTTCTGGGCTTTCAGGGTCCGTGGACCCCCAGAGCAGACATTCTC
AGACTCCCGAGGGACATGCGCGAAGATGTTTTCTGTATCTTCTACAGAAAGAACAGGGCA
TGCATTTGGTCCTAGTTGTTCAGCGATGTCCCCGTATTTTTAGGAATCTCTACCTCAAGG
CATTGTTAGTTGTACATTTCTTACTCTCTTCAGCTCTTTTTCCTCTCCTCTGTTTCTGCT
CGCACCAAGTGCTGTTTCTCTTTTCCTCCTTTATGCTGGAGAATCATCTGGGTCTGTTCA
GCCATTTTTGTCTCTCTTTGGTGTTTATGGTGCCGAAGTTGAAACCTGGGGCCTCACGTG
CTAGGCAGGTGCTTTGCCACTGAGTGGTCCGTGCATTCCAGTACTATTACCACGCCACTG
GGATGCTCAAAGCTCCACCTAGAGCTAGCATTCTGAGCATTCTCCTGTGTCGTTAACAAG
CCCTCAGCATCGCGGGAATGGAGGGTGTACTTGGGTAGAGGTAATGGGGGTCCTAGCTGT
TGAAGGCACACTTGTATGTTCTGGTGGAATCAGCTAACAGCTTGCTTACAGATGCAGATG
CAGGGTGGGAACTGTCCTCACCATGGACACTGAGTAGAGGAAACTAGACAGAAGCAGAAT
TTTTCCTTCTTTTAAACATCTTTTAATGTTATCTTCTTTTAATTTTTCAG
1 EXON 1 37888871 37888972 - - 102
GTTGTTGCAATCCTGTGCTCCAGAAGTGGTGGCTTTGAGGTGTGACCCTGCCCACATTTG
GGCCCAGTCCTCATCAGCTCCTCGGCAGAACGAAGAAAACAG
INTRON 1 - 2 37888973 37892551 3579
GTCAGTTACCCTGCGTAGGCTTCCT..........GCAGTGTCTCCTATTTGTCTTCCAG
2 EXON 2 37892552 37892658 - - 107
CATAAAGGAGTGATATCCAGAGAAGAAAAGGGCTCAGCAGAGTCATTTCCTACTCCATGT
GGATGACAGCAGGAGTAAGGGACTATCATTTGGAGCAGAAAATGGAG
INTRON 2 - 3 37892659 37893771 1113
GTAATTTGCAATGGAGACAGTTCTT..........GACATCGCTGACTTCTCTTTTTCAG
3 EXON 3 37893772 37893984 - 0 213
TTCTATAGCAGAGACTTCTTAGAAGCATAAAACCCTGTCCCGATGACGTCGAATTCGCCC
ATTGGTTTAGAAGGCTCAGACCTGTCTTCCATCAACACTATGATGTCAGCAGTAATGAGC
GTAGCGAGTGTCACAGAGAATGGTGGGAGCCCCCAGGGCATCAAGTCCCCCATGAAACCT
CCAGGACCAAATCGGATTGGCAGAAGGAACCAG
INTRON 3 - 4 37893985 37898411 4427
GTGAGGGTGTGTGGCTTTGGCGGGA..........ATCCCCTGTTTTATCCTTGTTTTAG
4 EXON 4 37898412 37898501 0 0 90
GAAACGAAAGAGGAGAAGTCTTCCTACAACTGTCCCCTATGTGAAAAGATTTGCACCACC
CAGCACCAGCTGACCATGCACATCCGTCAG
INTRON 4 - 5 37898502 37899623 1122
GTTTGCCCCTACTTTTGTATTGTTT..........ACCGTTGTCCCGATTGCTTCCGCAG
5 EXON 5 37899624 37899787 0 2 164
CACAACACAGACACGGGAGGAGCTGACCACGCATGCAGTATCTGTGGGAAGTCGCTGAGC
TCGGCCAGCTCCCTGGATCGGCACATGCTGGTGCACTCTGGCGAGAGGCCTTACAAGTGT
ACAGTGTGTGGCCAGTCTTTCACCACCAATGGGAACATGCACAG
INTRON 5 - 6 37899788 37916021 16234
GTGGGTGTTGTTCCTTGCTTGGGTG..........TTTTCTGTGTGCGTCTTCCTTCTAG
6 EXON 6 37916022 37916160 2 0 139
ACATATGAAGATTCATGAGAAGGATACCAACAGTACTACAGCTGCAGCCCCTCCATCCCC
TCTGAAGCGCAGGCGGTTGTCCTCCAAAAGGAAACTGAGTCACGATGCCGAGTCAGAAGA
CCCAGGACCAGCTAAAAAG
INTRON 6 - 7 37916161 37916458 298
GTCCTCTGAGTTTATGACACAGACA..........ATGCCAGTCTCTGCTTTTTCCTAAG
7 EXON 7 37916459 37916595 0 2 137
ATGGTAGAAGACGGGCAGTCAGGAGATTTGGACAAGATGAGCGATGAAATCTTTCACTGC
CCAGTGTGTTTCAAGGAGTTTGTTTGCAAGTATGAACTGGAGACCCACATGGAGACCCAC
TCAGATAACCCACTAAG
INTRON 7 - 8 37916596 37928122 11527
GTAGGGGAATGTGAACAGAACCTGT..........CATGGTTGTTACTCTCTTCTCCTAG
8 EXON 8 37928123 37928312 2 0 190
ATGTGACATTTGCTGCGTCACCTTCCGCACACATCGAGGACTGCTGCGCCACAATGCACT
TGTCCACAAGCAGCTTCCCAGAGATGCCATGGGAAGACCTTTTATCCAGAACAACCCTTC
GATTCCTGCTGGCTTCCATGATTTAGGGTTTACTGACTTCTCCTGTAGGAAGTTTCCTCG
AATCTCTCAG
INTRON 8 - 9 37928313 37929557 1245
GTATGGTGCTAGACCTAGTCAGCCA..........GCTTTTGCTTGTGGGTCCCACTTAG
9 EXON 9 37929558 37932489 0 1 2932
GCCTGGTGTGAGACAAACCTACGGCGGTGCATCAGCGAGCAGCACCGGTTTGTGTGTGAC
ACCTGCGACAAGGCGTTCCCCATGCTGTCGTCACTCATCCTGCACAGGCAGAGCCACATC
CCTGCCGATCAGGGACGGGAGAAGCTCCAGACCAAGACCCTGGCTGCCGAGTCCTTGGAA
CAGAAGGCCTTCCTGGCCTTGCTGGGCCTGCAGCACACCAAAGACGTCAAGCCTGCCCCG
GCGGAGGAGCTCCTGCCGGACGACAACCAAGCAATACAGCTCCAGACACTTAAGTACCAG
CTACCTCAGGAGCCTGGCTGCCCCACCGTGCTAAGTGTGTCTCCTCTTGACGCTGCTTCT
TTAGGTGGTTCTCTGACAGTCCTCCCAGCTACCAAGGAGAATATGAAGCATCTGTCTCTG
CAGCCCTTCCAGAAGGGCTTCATCATCCAGCCAGACAGTAGCATTGTGGTTAAGCCTATT
TCAGGAGAGTCGGCCATTGAGCTGGCAGATATCCAACAGATTCTAAAGATGGCAGCTTCT
GCTCCTCCACAGATCAGTCTTCCGCCACTTTCCAAGGCCCCTGCCACCCCGCTGCAGGCG
ATTTTCAAGCACATGCCTCCTTTGAAGCCAAAGCCCTTGGTCACACCCCGGACAGTGGTA
GCCGCCTCCACGCCCCCACCTCTCATCAACGCCCAGCAGGCATCTCCCGGTTGTATCAGC
CCCAGCCTTCCTCCACAGTCCCTGAAGTTCCTCAAGGGGTCGGTGGAGGCAGTGTCCAAT
GTTCATCTGCTTCAGTCCAAGTCTGGGATCCAGCCAAGCACCACCACACAGCTCTTCCTG
CAGCAGGCTGGAATGGAGTTGCCGGGCCAGCCCGAGATGAAGACACAGCTGGAACAAGAG
AGTATCATTGAGGCCCTGCTGCCCCTCAACATGGAGGCGAAGATCAAGCAGGAGATAACA
GAAGGTGACCTCAAGGCCATCATGACAGGCTCCAGTGGCAAGAAGACCCCCGCCATGCGC
AAGGTGCTCTACCCCTGCCGCTTTTGCAACCAGGTGTTTGCTTTCTCTGGAGTCCTGCGA
GCCCACGTTCGCTCCCACCTGGGCATCTCACCCTACCAATGCAACATCTGTGACTATATT
GCTGCAGACAAAGCCGCCCTGATCCGTCACATCCGCACACACAGCGGGGAACGGCCTTAC
ATCTGCAAGATCTGCCACTACCCATTCACGGTCAAAGCCAACTGTGAGCGGCACCTGCGC
AAGAAGCACCTCAAGGCCACCAGGAAGGACATTGAGAAGAACATAGAGTACGTGAGCAGC
CCCACCGCAGAGCTGGTGGACGCCTTCTGCGCCCCAGAGACCGTGTGCAGACTGTGCGGG
GAGGATCTGAAGCACTACCGAGCTCTACGCATCCACATGCGCACACACTGCAGCCGGGGC
CTGGGCGGCTGCCACAAAGGCCGGAAACCCTTCGAGTGCAAGGAATGCAACGCTCCCTTC
GTGGCCAAGCGCAACTGCATCCATCACATCCTCAAGCAGCACCTGCATGTGCCCGAGAAG
GACATCGAGAGCTACGTGCTTGCCACCAACAGTGGCCTCGGCCCCGCGGACACGCCCACG
GATGCCGCTTCCAGAGGAGAAGAGGGCAGCTGTGTCACTTTCACGGAGTGCAAGCCCCTC
GCCACTTTCCTGGAGCCCCAAAATGGCTTTCTTCACTCGAGCCCCACCCAGCCCCTGCCT
TCCCACATCTCTGTCAAGCTGGAGCCAGCCAGCAGCTTTGCCATGGACTTCAACGAACCC
CTTGACTTTTCACAGAAAGGCCTGGCACTGATCCAAGTGAAGCAGGAAAATGTGTCCTCC
TTGCTGACGTCTTCCTCCTCCTCTGCCCTCTATGACTGCTCCATGGAGCCCATTGACCTG
TCCATCCCCAAGAGCGTCAAGAAAGGAGACAAGGACACAGTTGTTCCCAGTGACGCCAAG
AAGCCGGAACCGGAAGCTGGGCAAGCCGAGCCGCTCTCACCCCGCCCACCACCCTGCCCT
ACCTTGTCAGTGACTGTGGAGCCCAAGGGGAGCCTGGAAACCCCCACAGGCACGGTGGTG
GCCATCACCACAGCTGCCAAGCTAGAGCCCCACACTCAGCCCCTCCAGGGCTCCGTGCAG
CTGGCTGTCCCCATCTACTCCCCCGCGCTCGTCAGCAATACTCCCCTCTTGGGCAATTCT
GCTGCCCTCTTGAACAACCCAGCCTTGCTTCGGCCCTTACGGCCAAAGCCCCCCCTCCTC
TTGCCAAAGCCCTCGATGACAGAGGAGCTGCCGCCACTGGCCTCCATCGCCCAGATCATT
TCTTCCGTGTCCTCGGCCCCTACTCTGCTGAAAACGAAGGTAGCTGACCCTGGACCATCG
ATCACCAGCAGTAACACTGTGGCCACAGACAGCCCAGGAAGCTCCATCCCCAAAGCTGCC
GCCACCCCCACTGACACCACAAGCTCTAAAGAATCCAGTGAGCCACCCCCTGCAGCCAGC
AGCCCTGAGGAAGCCTTGCCTACTGAACAAGGGCCGGCTGCCACTTCCTCGTCGAGGAAG
AGGGGCAGGAAAAGGGGACTGAGAAACCGGCCCCTCCCCAACAGCAGTGCTGTGGACCTG
GACTCCAGTGGGGAGTTTGCTAGCATCGAGAAGATGCTGGCCACCACAGATACCAACAAG
TTCAGTCCCTTTCTGCAGACTGCAGAGGATGACACTCAGGAAGAGGTGGCTGGAGCCCCT
GCCGACCAGCATGGGCCCGCTGATGAGGAGCAAGGTAGCCCCGCAGAAGACAGGCTGCTG
AGAGCAAAGCGGAACTCCTATGCCAACTGCCTGCAAAAGATCAACTGTCCCCACTGTCCC
CGGGTCTTCCCTTGGGCCAGCTCCCTGCAGCGGCACATGCTTACACACACTG
INTRON 9 - 10 37932490 37941542 9053
GTAAGAAGGCCCTCACGGCTCACCA..........TGCGTATTTTTTTTTCCTGCTTCAG
10 EXON 10 37941543 37941704 1 1 162
GTCAGAAACCCTTCCCTTGTCAAAAATGCGATGCCTTCTTTTCTACCAAATCTAACTGTG
AGCGGCACCAGTTGCGCAAACACGGAGTTACCACCTGCTCCCTGAGAAGAAACGGGCTTA
TTCCCCCAAAAGAGGGTGATGTTGGATCCCATGATAGCACAG
INTRON 10 - 11 37941705 37946856 5152
GTAGAAACTCTAGGTGATGGAGAAC..........CTCTCCTGTCTGCTTGCTTACACAG
11 EXON 11 37946857 37947663 1 1 807
ACAGCCAGTCAGACACAGACACGTTGACCACCCCAGGTGAGGTGCTGGATCTCACAGCAC
AGGCTAAAGAGCAGCCACCAGCAGAGGGAGCCAGTGAGATCAGTCCGGCTCCACAGGACC
TTGCCATCAAAGAGGCCAAAGCAGCAGCAGCTCCCTCTGAGGAGGAGGAAGAAAAGGAGA
CAGAGGAGAACCCAGAGCCAGAGGAAGAGTGTCCTGTGGAAGAGAGCACTGGGGCTGCAG
ATGCCCCCGAGGAAGACACAGCCAGCAACCAGAGCCTGGATCTTGACTTCGCCACCAAGC
TGATGGACTTCAAGCTGGCAGAGAGTGAGGCAGGCTCTGTGGACAGCCAAGGCCCAGCCC
AGCAGGAGCCAAAGCATGCCTGCGATACCTGTGGAAAGAACTTCAAGTTCCTGGGCACCC
TGAGTCACCACAAGAAGGCACACAGCTGCCAGGAGCCGAAGGAGGAGGAAGCAGCGGCAC
CTTCGCTGGAGAATGAGGGCGTTGGCAGAGCGGTTGAGGGGCCCTCGCCTTCCCCTGAGC
CTGTAGAGAAACCAGCCGAATCCCTAGCAATCGATCCAACACCAGGAACCAGGGAGGCCT
CAGTGGCGAAACAGAATGAAGAAACAGAGGGTCCCACTGATGGGGAAGGTACGGCTGAGA
AGAGGGGTGACGGTGACAAAAGACCAAAGACAGACTCCCCCAAAAGCATGGCCAGTAAGG
CAGACAAGAGGAAGAAGGTTTGCAGTGTATGCAACAAGCGGTTCTGGTCCCTGCAGGACC
TCACCCGGCACATGAGGTCACACACAG
INTRON 11 - 12 37947664 37948642 979
GTATGAGAGACCAGAGCCAGCCTGC..........TCCCTTTCATTCTTTCATTGTTCAG
12 EXON 12 37948643 37951994 1 - 3352
GAGAAAGGCCATACAAGTGTCAGACCTGTGAGCGAACCTTCACCTTAAAGCACAGCCTGG
TTCGACACCAGAGGATCCACCAGAAAGCCAGGCACAGCAAGCACCACGGGAAAGACAGCG
ACAAGGATGAGCGGGCTGAGGAGGACAGTGAGGACGAGTCCACCCACAGTGCTAACAACC
CTGCCTCTGAGAATGAGGCCGAGTCAGCTCCCAGCACCAGCAACCACGTAGCTGTCACCA
GGAGCCGGAAAGAGAGCTTGTCCACTTCTGGGAAGGAATGTAGCCCAGAGGAGAGAGCCG
CAGCTGAGCAGGCAGCTGAGCCCAGTGCCCCCAAAGAGCAGGTGTCTCCAGGTGAAACAG
ACCCCCAGAGCCCGGCAGCCATCGTGCAAGACTTGCTGGAGCTGTGCGGCAAGAGGCCTG
CCCCAATCCTGGCGGCCACCGACGGGGCCTCACAGCTCCTGGGCATGGAGTGACAGCCCG
CCCTGTCTCCATCAGCTCAGAGACAAAGCTAGCGGAACATCCCAAATGTAGATTTTACAA
GGTATTCTCAGCTTCCTTCAGTTGTCTGGAGAGAGAGGAAAAAGAGGGCAAGAGAGAGAC
AAGCAAGCCTGTGGCCAACCAGCTCGTGCCATAGCCTTACCCAGTACACATGCACCCGGC
CCCAGTACAGCCGGCTTCAGTGCCTTAACTACTTATGGGTCCTCCCATGTCGTTGTGGGT
GTCCCCCTTCCAAAAAAAAAAGACATTTTAACAAAACAAATATTTTAATGAATTTTTCGG
AGGACCTTTTCATTTAAGCATTAACATTACCTTTTGTATTTGTGTGTTTGAGCTTGTTTT
TGTGAGTCTGTGATAGTACTGTTTTTGTTCTGTGAGCTGGAAGCAGAAAACCTTCCCCTT
GGATCCTGTAGCCAATAACTGGAAGAAAATGATGTGAATTTCATGTACATGACCCGAGGG
AAGAGGGTGTGAGGCTGATTTCTAAGCTAGACCTGTATTCTCTGGTTCACGTCGGGGAGG
AGCCGCGGCCTGGCCTCTGTCATTAGTAGATGTGGTTGACGCAGGGTTCCTGTGTGGTGT
GAGCCAAAGCCAGGAAAGAGTCTAGCTTCAACCTCGCGAGTGTTTCCACCCTCTCCGTGT
TAGAAATGGCTAGTGTTCCCATTCTTAATTTACAGAGAAAAGTGGCCTCCCCAGCACCCT
AGCCTACAGAGGACACGGCTGGAGGTCATATAGCCACTTTCCCTTCTTCCCATTCGGTAT
ATGTTATTAATATTATTATTATTATTTTTATTTTTACTTCTTCAGTTCGCTGGGCTCTGC
ATTCAGCAGAAACAAATGGGCAATATTTGTCCTGGGTGACCTGTACTGCTCCCTGGTCCC
CCCTTATTGTGTGCCTGAAGCTTCTGGTGGCACGCCAGTGATGGCTCTTCTACTGTACTC
AGACAAACCTTTCTTCCATGACTGTAGAATCCAGCAGGAGCCAGGAGTGCTCCTCCAAGC
GTGGCCAAGGAGTGGCTCAGAGGGGAGAGCAAGGATGCACAAGTGGTGGGGAGCAGGCAT
CCGAGACACCAGGCCATACCTGGGGCACCTCAGAGTCAGTTTGCAAGGCACCCCAGTCTT
CCTGCTAAGCTGGGTCAGCGCCTTCCCCCAGCCGTGCTACTACCGTCATTTGGGAAGCAT
TGAGATACTACTGCCAGTGATGAACTGAAGTGCATGCGCAAGGTCTAGATGCGAGAGTTG
TCTTCACCTTTCTGCAGTGTGGGGTTGCTGCTTGGAGAGAGGAGTGCTTTTAAATCCCTA
ACTGGCCCAAGCCCCTGGTGCACAGAGACAGGGTTCCTTTAGTTCCTGGGTGTTCTGTAC
AAACAGTAGACCTCGCTCATCAGCAAAAAGAAACTCTTCCTACTGTAGCTGAGCTCGGTT
CAGCACCCTGTCCTTTAGCCGAGACCCGAGGATGCCTGAGCCACACTGCTACTAGAGCCC
TGTTTGTCCCTTGCCTTCAGGGCCTCAAGATTTCCCCAAGAGAGGCCCTCCACTGCTCCA
CCCCCTCCCTTATCCTGTGGCTCTATATGCTCCTCCACGAAGATGTGCAACCCGAGGCGT
GCGTACCCCTTTGTCCACCAGTATCTAGTGGCTAAAATCCAACCACCCTGACTTCAATGG
AAGATAGATATTCTAGAGATAATGAAAAGTGATATATGTATGAAAAAAACATTGAGGTAT
ATATGATTTTTAATTGTATTAGGGATGTGTGGACCCATTTAAAGTTGAGATTTTATTTAC
TGTAGAGAGAGAAAAATCAGAACCATTGATCCCATGATCTTCTAAGTCAAACCCAGCTCC
TACATCCCTTAGGTGTTTTTATTATTATTATTATTATTATTATTATTACAATTGTTATTG
TTTTCATTGTTATTATTTGGGGTTTCTTGTGTTTTGGTTTTCTTTGCAACTCTCCACACT
AAACTCATGATACTGTGGGGAGAGGCCATGACTGAACCCTACGCTGCGGTAAGATGTAGC
AGGGGTTGCTCCCAGCAGCGGCCGCCGCCAGGGCTGCAACTGGCAATAATCACTATTGAT
TTAAAGCTTTATTTAGTCTCATCTGTTCCTTCATAGTTAATAAGGTCTTGCCACATTTTA
TTAGTGAGATTGAGAGATGAATTATTTGTCTGTTGTCCTCCCCGCCTTCCCTCCCCCAAT
ATTAAACTGTGAAGTTTGTGATTTTGTTTAAACGCTGGGTGAATCATAGTGTTAGTTTGC
ATGTCCAGCTAATTTGTTTCTATACATTTTGTTTGATTCTCTTTCTCCTCAGGGCTTTTA
CAAATATATATATATTATATATGTATATATATATGGATCTTCTGAAAAAAATTGAGGTGC
AAATTTTCTCTTTTTTGTTGTTTTTTGTTTTCTCTTTAATGGACACAATGCTGATATTCA
ATCACTACATAAAATATCTGGCTGTGAAACAAACCAGAGAGGCCCCACGGGGCGTTATCC
AAGCAGCTCTGCAGAAGCTCCGTGAACCGGATACCGATTTCAGACAGATCATCCTGCGTT
CGTCTCTTTCCTCTCTTCTCTTTCTTCAAGAAAAAAAAGTTGATCCTAATGATTTCAGCC
CATGCATTAAACAGAAAACAATAATAACTGTAGAATTCATATTTTTCTAAAGGGAACTTA
AAAACTGCTGCTACATGTATGTACAAAACTGGTCTCTGCTACATGAACAGAATCACAGGT
TTGGTTTTGGTACTTTTGTTTCTCTTTGTACTCAGTTGTGTAGAACTTCCAAATTCAGAG
TGAAAAGAAAGCTGTTCTGCATCAAACCATCTAAGCAATAAATGTTATATTT
3' upstream sequence
AAAAAACGGCACACGACCAACCTGTGAGTTCCTCCAAGCCCATCTCCAAGCCTGCAGTCC
ACTCAAGGCAGGTCTTAGGATCAAGGGCTGACCCGAAATCAGTAACGGCCTTAGAATCCT
GGGCACCCAGGCAGCATCTTTGAAAGACAGTTGGGGTTGGAGATGTGGCCCAGTCAGCAA
AGTGCCTGTCCCAACAGCGTGAGGACCCGAGTTCGGGTTCCGAGAACCCACGCTGATTGT
GCAGCAGCATGGGTGATTGGGGATAGGGGGCCTGGGGGGGACGGGGACTGGGAGGAGGGG
GCGGCAGGCAAAGGCAAGCAGACCCCTGGAACTCCTGGACGGCTAGTCCAGCCAGATTGT
TTATCACAGGTTCACTGAGAGTTCAAGAAATAAGACAGGAGGCTGGCATTGTTGGCTCAG
TGGGTAAAGGCACTTACATCAAACCTGAGGGCCCGAGCAATCCTTAGGACTGACTTAGGA
GGTAGAAAGAGAAAGGACTCTCAGACAAAAGAACAAGTGGGAGGCAAGCACTTGCATACA
TAAGACGAATGATTTTTTTTTTAAAAATCAGAAAAACTTTGATAAATAATAAAAAAGGCA
ATTGGCTGCAGTTAGATGTTCAGTCTTGGGAGTGTGGACAGGGGACATAAGAAGCTGTGG
TGAATTTCATGAGGCTAGAGGGACAGACTGAAGGGGCAGCAGCACAGACAGCCGCTTTTG
TCTCTTATTTAGCTGCAGCTTAACTGGTAATGCTGGTCCTGTGCACTAGTGACTCCAAAG
GAGAATGCTGGGCCTGCCTTCCCCGGGGAAGGTGGAACAGGTTTAGTTGGCCTGGTGGAG
AGCAGTGGGTTTCAACCTGGGGGGGTCACAGGACCCTTTCGAGCCATCTGTCATTGTGAG
GAGCCTTGTACCCTTCTCGCTGGGGAGTAGCCCTCAGAAGGTGACCCCAGAAGAAACTCG
TGGGAAGTTAATTATGGCAGTGCTACAAAGTCATTGGCCA..........

Sequence Detail Report

Gene Symbol (Gene ID) Rreb1 (ENSMUSG00000039087)
Transcript ID ENSMUST00000037232
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1755 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information