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Target CDS Information

Gene Symbol (Gene ID) Diras2 (ENSMUSG00000047842)
Cross Reference
CCDS CCDS26516.1
EMBL AK041534, AK136096, AK136101, ...show all
Fantom 7420455O04, 7420456K01, A630019N03
GO GO:0005525, GO:0005622, GO:0005886, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Diras2-201
protein_id AAH86799.1, BAE20592.1, BAE22817.1, ...show all
RefSeq_mRNA NM_001024474.2
RefSeq_mRNA_predicted XM_006516950
RefSeq_peptide NP_001019645
RefSeq_peptide_predicted XP_006517013.1
UCSC uc007qmv.1
UniParc UPI00000213B4
Uniprot/SPTREMBL Q3UWU7
Uniprot/SWISSPROT Q5PR73
Definition protein_id:ENSMUSP00000055416
translation:
MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
NKCDESPNREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
KKSKQQKRKEKLKGKCVVM

Chromosome 13
Length
Position(start - end)
598
52507670 - 52508269
Orient to Chromosome minus
Link Location : (13:52507670-52508269)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Diras2 (ENSMUSG00000047842)
Transcript ID ENSMUST00000057442
Reports
substitution
cSNPs4
Insertion28
Deletion35
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num4
non-synonymous num0
synonymous substitutions 52507768 (p.Leu168Leu), 52507883 (p.Arg129Arg), 52507892 (p.Ser126Ser), 52508135 (p.Arg45Arg),
non-synonymous substitutions
B6 transcript
(ENSMUST00000057442)
MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
NKCDESPNREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
KKSKQQKRKEKLKGKCVVM*
MSMv4 transcript
MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
NKCDESPNREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
KKSKQQKRKEKLKGKCVVM*
homology100.00 (200 / 200)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Diras2 (ENSMUSG00000047842)
Transcript ID ENSMUST00000057442
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GCTTACAGAATCTGTAAGCTAAGCCTAATTTAGAAGATACAGGCCCCATT
TTGTAATTCTTTTACCACATCACCAAAGGACAAAGATAAGGATAAAAAAAGAAAAAAAGA
GTTTCCTCCAGCCATAGAGTGCAAGTATGATATAGGTAGATGTTCCTGTCCAGCGCTTAC
AAAATGTCAGTACAGCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTAATTCTTTGAAATGGTCATGAA
AAGCTGCTGAGCAGCGTGGTCCCCCAAGCTTACCCACAGAGGTGATGTCAGAGCCTTGTC
CTGTTAAAACGCTTGAATTCTTGTAGTATGGTTGGCTTTCAGGCAGGGAATTTCTTGGCA
CCTCTAAGTGACAGGCTGTCTTGTGATTTAGCACATGTGACTACTATTGTCGACTTGACA
GAATCTAGAGTCACCTGGAGACGGGCCTCAGGCTTGTGGGAGGAGAGATTATCTTGATTA
CTTAAGTGTTGTGCAAAGGCTGGTCTTGACTGTGGGCTAGACCATTCCTGGGTACAGGAT
CCTGGACTATACAAATTGATCTGGGTAGCAGCGTGCTTCCACAGTCGTCTAAGTTCTGAT
TACCGATGCGATGTGATCAGCCATTTCAAGATTTTTTTTTTCCTGCTTTGCTTTTTTCCT
ATGAACTATGAGCCAGAGCAAACCCAGTTTTCCTTAGCTTGTTTTTGTCACAGCTACAGG
AACAGAAACCTTGCCCAGTGACCAAGTCTTATTGCGTGGTAAGCAGTGATTACGTACACT
AGGGTAGGAACATAGTTTTAAACACAGGAATCCACTGTCCTTTCAACGGAATGATTTTTG
ATTCATTTAATTTTCAGAAAATTCTAGTCTCTTGTCATCTATTCCAGAAGCTTTCGGTAG
AGGGCAGCTGAAGGCTCCCGGTGAAAAGCAGGCCACCGCAACGAGCAACC
1 EXON 1 52530420 52530836 - - 417
ACTGTGCTTGCAGGAGCTTGAGGAGGGTGGAGCCGGAGGCCGGGAGGCTAGAGCCAGAGA
GCACCGCGTGGGAGGACTGCACAGGGCCAGGCGCGCGTGCGGGCGGTGCAGGGAGCGGTG
CTGGAGGTTGCAAGGCTGTGCAGAGAGCTCGGGCGGGTGCATAAGGCAGAGAGGGGCAGA
CAGAGAGGGGCAGGACAGGGGGCAGGACGTTGCATTGGGCGTTGCACTGGAGGTGCAGGG
CTCTGGACATTGCACTGGGGGTGCGGTGCACAGGGCGGTGCGGGGCGCAGGGCAGCTGAC
AGCGTCATCAGGCGGGAGCAGCGCGCACTCCGCCTCAGCAGCCACCGCATCGCGCTGCGC
GCAGCGGGTCCCGGAGCTGCGCCTGGAGACCTGCGGCTCTGAGCCGGCTCTCCCCAG
INTRON 1 - 2 52508306 52530419 22114
GTAAGCAAGCCACCACGGCTCTCGG..........TCCCAACATCTGCTTCCTCTGCTAG
2 EXON 2 52504375 52508305 - - 3931
GTATCTCCTGGTCAGTAGCTGGAGTTCTGAAGCAACATGCCGGAACAGAGCAACGACTAC
CGGGTGGCGGTGTTTGGGGCAGGCGGTGTTGGCAAGAGCTCCCTCGTTTTGAGGTTTGTG
AAAGGGACCTTCAGGGAGAGCTACATCCCGACTGTGGAAGACACCTACCGACAGGTGATC
AGCTGTGACAAGAGCATATGCACGCTGCAGATCACCGACACCACCGGGAGCCACCAGTTT
CCGGCCATGCAGCGGCTGTCCATCTCCAAAGGCCACGCCTTCATCCTGGTCTACTCCATC
ACCAGCCGGCAGTCCCTGGAGGAACTCAAGCCCATCTATGAGCAGATCTGCGAGATCAAG
GGGGATGTGGAGAGCATCCCCATCATGCTGGTGGGTAACAAGTGTGATGAGAGTCCCAAC
CGCGAGGTCCAGAGCAGCGAGGCAGAGGCCCTAGCCCGCACATGGAAGTGCGCCTTCATG
GAGACGTCCGCCAAGCTCAACCACAACGTGAAGGAACTCTTTCAGGAACTCCTCAACTTG
GAGAAGCGCAGGACCGTGAGCCTCCAGATCGACGGCAAGAAGAGCAAGCAGCAGAAGAGG
AAGGAGAAGCTCAAGGGCAAGTGCGTGGTCATGTGAGAGGCCTTCGTGCAGGAGCTGCTG
CTCTCGGGCCTCTCTCTTCCTCCCCTCTGTGAACCCCCACTGTCGTCAGGGCAGCATGTC
CGATGCCCGTGTGTTAAACATTGCATTTGGCTGCGACACACCCTGCAATGTCCTTCAGAG
GCATTCCACACACCCCACTAGCCCACCCCCCTCAGGAGATGCAGAACCTGCGATGCATCT
TAGCATCCCAGGAAGCCGAGGCCAGTCCTGAGTGGGCTTTAGCCATTTGAAGATGAGGGG
ACTCAGAGCTGTGGACACAGGAGAACCTGAGAGTACTGTGTGATGCATGTGACAGCAGGT
TAGACCATGGCTACCAGTACCATCCTGCATCAGGCAGCTTAGTTCAGAAGTCACTAACAT
CTTTGGGGGAGGAGTAGGCAGGCAGATGAGAAACCAGTTGGACCTGTGGATCCCAGTGGT
TCCCGTGAGTGGATTTTTAGTGGGATTAAAGACAAAATACCATAACCCCCATCTAAGCGA
TACTCATGCTATTCCTACTGACACACACTGAGGGATTGCCCCCCTCTTCCTCAAAGCCTT
CTTTGTAAGCACCGGGTCAGCCTGTTAGGAGTATACACTTCATATGTAATGCCAAGGCCA
CTTGTGGCATGATGCTGTGTCAGCACTTCTTCAGTTTTTGAGTCAGGACATTGTGACATC
ATGTAAACATTGCAATAACCACCCTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTG
TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTCCCCTATACTTTGAGGGTTCTAGAAATGT
GAACTGACTTTCTTCTGACCTTCGAGGGTTGCCACTTCTTGCAGCCCTCTGATTTTTAAA
TAAAAGGAAATAAAGTAGGCATGTTTTTAGACTCCCTCTTCCCCTCCCCCAAGATGGTTT
TCCTGTCTTAAATAACTCCACGAGTACCCAGCTGGGAACCAGCCAACCAAGAGCGTCTAA
ATAACCAGAAGCACATCCATTTTTTTTCTAAATGACGCGAGCATGTAGATGCTATGCGTT
ACACCTTAATGAAATACTTTGAAGCAGACGTCGTTCACTGTGTTTTTAACGATTTATCTA
CATCAGAAGTAGATTGCTAGAAAATACATTTAATTCGTAGTAAATCTTCTCCTCGTTCCT
TGCTAAATGCTCTTAAAAGTTCCTCAGAGCAACGTGCAGCCCAGACGCAATCCTCTCCTA
AGGACTTTTGAGTGCACCCCGTATCCTTCAGAAGGAATCATAGCTACTGCGTGAGGGATC
AGTGGCCACAGTGGCTGCAGATAGGTTGGGCTAATCTCTCTTTCCTGGGCACAGTGCCCA
CGGCTTAGTGTAATTTGCCTGCCATCCTGGAGTCCGGCTGGATTTTGATTCTTGGAAAGT
CTTACTTCTATAGTTAATGAGAAGGCACATGCTGGTCTTGGGTGCCAGCTCGATCATTCT
CTAAGCCATCTTACCACTGACCAGTCTGCAGGTAGAGGAGGCTGTAGCACTGTGTGAGCC
TATACAGTACTCTCATGGCCAGCAGGCATGGCCAGTGGGCAGAGGTCCCAATGCTGGGGT
GTTTTGGTCGGCCTCTTGCTCCACCAAAGCCTCCGAAGCACACTGTGTTCAAACACTTGC
TTCCTTCAGACCTCTATAATTCAGTCTGGCCCTCTCTGCTCTGCCAATCATAACTCACCC
TGGTGATGTGCTGAGGGCCAGGGAGTTCCCTCAGAAAACCGTATGCCTCAGCAATCTTAC
CATCTCCTTAGACCTCTAGAACAAAACCCTTGGGGTTATCTGGGCAAGCAGCCACACTGA
GAAATGAGGAAGCCCAGGAACCAAGCAAGAAGAGCCTGGAGCCCTTGTGCCCCATCCAAA
CCCACTCTGAGTCTCTTCTATCTTCCCCATTTGTTCCCAGTGGCCATTCTCTATCACAGT
GAGATGGAGTTATGGAATTTTCTAGAATGTCTTCAATTTGTTGTTCCATTTCTCCTCTCA
GAGAAAACATATCACCTTGTCGTTTAGATTTGGGGAACAGCGAGGGAAAGACCACTGCTC
TGTGGATGATGTGACACATACGTTATCTACACATCATATAGGATATATATATATATATAT
ATATATATTTATGGCGATCCCTTTACAGTAAAATCCTGTCTGTCCTACCGACTGTCACCG
TGCTTCAGACACAAGCATTGTGCCCCATGATTCCCTGTTTCCAGTGACCGCACATCAGGG
TTCTTTCAGCCCTGTATGTCAGTTTCCATATTCCTAAGTGTTTCAGTCTTCATTGACACG
AGGATCTTGCTATAGCTCCATCCACAGTCTTTGCTCCTCTCTATGCTGTCTGTGAGTTTA
GAGGGTGGGAGGTGAAGCCTCCCTCCTTGGGCTTCATTTTGACACTACATTCTATAGATT
GAGCCGAACACTGGGTAGCTATCTTAACATCGCCTTTGGCAAACTTCCCTCTGACTCAGG
GGCTGAGGACACAGTACTATCGGGCCAGTGGCTTTCAGCTTTGCTTTGGTCCCAGCCCAA
GTCATGAAGCTGAGACTCTTGGTAATATCCTACATTGCACATGGGACTGGAAACTTCTGA
CCCAGCCTCAGCTCATTATAAAACTTGAAAACTTGCTTTGAAGATGGCACTCTGGGGTTA
AGCACGGGACTCCATGAGCTCCCTAATCCCCACTGGTCCCCTCTCCATTCAGTGACAAGC
CATGGGCACGCATCTAATGCATCAAGTCCAACACAAGAGCAATATCCAATTGTCCACTAG
ATCTAAAATTATATATATATTATGTAATTTATCTTCCTGCACTTTTGAAGCATAAAGTAG
TAAATTGTACATATATATCTCTATATATCAATATGCTAGTATATCGGTTTCACTCTTTGT
AACATTCTTTGTAGAAGAAGATGTACTAAATATTTTAAAATTGCGCTGTGATATTCCTCC
CTACCCCAAGTTTGTAACGTGTCGCTCCTACTCAAGCTGTTTGGAAACACCCAAAGCCAA
AGGGGCATATGGAACTCCTATAGGAAGGACACCTCCTGGGATTCAGTGGCCCACAAAGAC
CTTGTGTCAATCAAGCATCTGTGATCAGAGTGATCATTGGCATGTGAGACGCCGGCACAT
GCTTCCACTGCAGCCCTTGCTGTTTCGGTTCCATTTCTGGGTGTGTCTAACTACTCTGTG
GTTACGAGGATCACCTTGTATAAGGTTCTAGTGGCAGCGATGGCCCCAGTCCATGGAACC
AGTTACAATAAAGCTCAGTTACAGCACCCTG
3' upstream sequence
GTTGGAGTTTGTTTTTTTTTTCTTTTGTTTATGTGTGTGTGTGTGCATGGACCTGTGGAG
GTGAGAGGTTAACATCAGGTGTCATGTCTCAGGAGCCAACTATTTTGTTGTTATTGTTGT
CGTCATTGTTGTTTTGAGACAGTGTCTATCACCGGGACATGGGGATTGCTGATTGCACTA
GTGTGGCTGGCTAGAGAGCCCCAAGGATCATCCTATATCCCTCACCCTGTTACTCAGGCC
CAACTTTTTAAACCACAACAATGAAAAAACCTATGGGCTCTGGGTTCAGATTCAGGGTCT
CATGTTTGCATAGCTTTCGTATTAACAAGCAGCTATCCCTTCTGCCTCAGGACCTCTTAA
ACACACACACACACACACACACACACACACACACACACACACACATATATCAGAATGAAA
ACAAGATAATGTTTTCAAGTCTAAATTGATGAGTTTCAAATGCTAGGGAATGACATACAC
ACACACACACACACACACACACACACACACACACACACACATATATACATGATATACATA
TACAGATTATTAGGATTATTAGGAGATATATATTTTACTCAAGCCACACACACACTGTGG
CATGACATAGAGAGCTACAGAGAGTCAGGTTACCCCATGCATCGTCTGGGTTTTTATGTG
GCTGTCTGAAGATCTAAACTTGGGTCTTTGCACTTTGCTGACTGAGTCATCTGTCCAGCC
CTGCACTTCAGATGTTTAAGGGTTGATCTGGCTGCCATGGTGTGGACCTGCTGCTCTGCC
AGCCCCAGCCACATGGCCTTGGGGGAATTAAAGGTTCTGAGCCTGTATTGGACAGTAACA
AGCTCCCCTGGAGGGTTCCTGGGAAATTTTCCTCGTTGCTCCTGGCCCTGGGTGGAAGTA
GGGGCTGATGCCTCAGGCATGGACAGGGGAGGGAGAAGGAAGGTGAGACACCGACTAATC
TGCAAGGAAACCAGTTCTGCACACTCGCTTCCTTCAGGTA..........

Sequence Detail Report

Gene Symbol (Gene ID) Diras2 (ENSMUSG00000047842)
Transcript ID ENSMUST00000057442
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 200 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information