MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Ewsr1 (ENSMUSG00000009079)

Cross Reference

EMBL	AK046434, AL645845
Fantom	B230384I08
GO	GO:0005634
goslim_goa	GO:0005575, GO:0005622, GO:0005623, ...show all
MGI_trans_name	Ewsr1-010
OTTP	OTTMUSP00000005289
OTTT	OTTMUST00000011349
protein_id	BAC32727.1
UCSC	uc007hwa.2
UniParc	UPI00000EAEDD

Uniprot/SPTREMBL	Q8BQU4
Vega_transcript	Ewsr1-010, OTTMUST00000011349
Vega_translation	209001, OTTMUSP00000005289

Definition

protein_id:ENSMUSP00000066827
translation:

MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
YGQTAYATSYGQPPTVEGTSTGLTILLILAWELLSILSNPVMLTLRCFHLFKP

Chromosome

Length
Position(start - end)

7658
5091362 - 5099021

Orient to Chromosome

minus

Link

Location : (11:5091362-5099021)
/

Detail Map

name	Ewsr1 (ENSMUSG00000009079)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Ewsr1 note : Ewing sarcoma breakpoint region 1 [Source:MGI Symbol;Acc:MGI:99960]

name	Rhbdd3 (ENSMUSG00000034175)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Rhbdd3 note : rhomboid domain containing 3 [Source:MGI Symbol;Acc:MGI:2444684]

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000079949

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000073308

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000102930

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000093365

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000063232

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000101610

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000134267

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000036320

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000150632

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000139742

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000109878

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000148761

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS24396.1 Uniprot/SWISSPROT:Q61545 RefSeq_peptide:NP_001269990.1 RefSeq_peptide:NP_031994 RefSeq_mRNA:NM_001283061.1 RefSeq_mRNA:NM_007968.3 RefSeq_mRNA_predicted:XM_006514508.2 RefSeq_mRNA_predicted:XM_006514509.2 RefSeq_mRNA_predicted:XM_006514510.2 RefSeq_mRNA_predicted:XM_006514511.2 RefSeq_mRNA_predicted:XM_006514512.2 RefSeq_peptide_predicted:XP_006514571.1 RefSeq_peptide_predicted:XP_006514572.1 RefSeq_peptide_predicted:XP_006514573.1 RefSeq_peptide_predicted:XP_006514574.1 RefSeq_peptide_predicted:XP_006514575.1 Vega_transcript:Ewsr1-002 Vega_transcript:OTTMUST00000011341 UCSC:uc007hvw.2 Fantom:3830417B11 Fantom:I830032F18 EMBL:AK019460 EMBL:AK151625 EMBL:AL645845 EMBL:CH466574 EMBL:X79233 GO:GO:0000166 GO:GO:0005515 GO:GO:0005515 GO:GO:0005516 GO:GO:0005634 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0005886 GO:GO:0006351 GO:GO:0006355 GO:GO:0008270 GO:GO:0042802 GO:GO:0044822 MGI_trans_name:Ewsr1-002 Vega_translation:208997 Vega_translation:OTTMUSP00000005285 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005886 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:BAB31732.1 protein_id:BAE30560.1 protein_id:CAA55815.1 protein_id:CAI25231.1 protein_id:EDL40519.1 OTTP:OTTMUSP00000005285 OTTT:OTTMUST00000011341 UniParc:UPI00000E8A5F
definition	note : transcript_id=ENSMUST00000079949 protein_id : ENSMUSP00000078867 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGERGGFNKPGGPMDEGPDLDLGLPIDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS70131.1 RefSeq_peptide:NP_001269991 RefSeq_mRNA:NM_001283062.1 Vega_transcript:Ewsr1-007 Vega_transcript:OTTMUST00000011346 Uniprot/SPTREMBL:Q5SUT0 UCSC:uc007hvy.2 EMBL:AL645845 GO:GO:0000166 GO:GO:0003676 GO:GO:0005634 GO:GO:0008270 MGI_trans_name:Ewsr1-007 Vega_translation:208999 Vega_translation:OTTMUSP00000005287 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005287 OTTT:OTTMUST00000011346 UniParc:UPI0000470512
definition	note : transcript_id=ENSMUST00000073308 protein_id : ENSMUSP00000073034 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Ewsr1-009 Vega_transcript:OTTMUST00000011348 Uniprot/SPTREMBL:Q5SUS9 UCSC:uc007hvw.2 EMBL:AL645845 GO:GO:0000166 GO:GO:0003676 GO:GO:0005634 GO:GO:0008270 MGI_trans_name:Ewsr1-009 Vega_translation:209000 Vega_translation:OTTMUSP00000005288 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005288 OTTT:OTTMUST00000011348 UniParc:UPI0000470513
definition	note : transcript_id=ENSMUST00000102930 protein_id : ENSMUSP00000099994 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTVEGTSTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGERGGFNKPGGPMDEGPDLDLGLPIDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001269992.1 RefSeq_mRNA:NM_001283063.1 RefSeq_peptide_predicted:XP_006514576.1 Vega_transcript:Ewsr1-004 Vega_transcript:OTTMUST00000011343 Uniprot/SPTREMBL:Q5SUS8 UCSC:uc007hvz.2 EMBL:AL645845 GO:GO:0005634 MGI_trans_name:Ewsr1-004 Vega_translation:208998 Vega_translation:OTTMUSP00000005286 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005286 OTTT:OTTMUST00000011343 UniParc:UPI0000470514
definition	note : transcript_id=ENSMUST00000093365 protein_id : ENSMUSP00000091057 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGLQSESLVYTSILKKYPYSVLSRQHNEKWD

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Ewsr1-010 Vega_transcript:OTTMUST00000011349 Uniprot/SPTREMBL:Q8BQU4 UCSC:uc007hwa.2 Fantom:B230384I08 EMBL:AK046434 EMBL:AL645845 GO:GO:0005634 MGI_trans_name:Ewsr1-010 Vega_translation:209001 Vega_translation:OTTMUSP00000005289 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043226 protein_id:BAC32727.1 OTTP:OTTMUSP00000005289 OTTT:OTTMUST00000011349 UniParc:UPI00000EAEDD
definition	note : transcript_id=ENSMUST00000063232 protein_id : ENSMUSP00000066827 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTVEGTSTGLTILLILAWELLSILSNPVMLTLRCFHLFKP

name
type	misc_feature
link
xref
definition	note : contig AL645845.14 2001..109446(1)

name	Ewsr1 (ENSMUSG00000009079)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011347 Vega_transcript:OTTMUST00000011347 MGI_trans_name:Ewsr1-008 OTTT:OTTMUST00000011347
definition	note : processed_transcript note : transcript_id=ENSMUST00000151847

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011360 Vega_transcript:OTTMUST00000011360 MGI_trans_name:Rhbdd3-008 OTTT:OTTMUST00000011360
definition	note : processed_transcript note : transcript_id=ENSMUST00000137370

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011359 Vega_transcript:OTTMUST00000011359 MGI_trans_name:Rhbdd3-007 OTTT:OTTMUST00000011359
definition	note : processed_transcript note : transcript_id=ENSMUST00000146879

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_110961 Vega_transcript:OTTMUST00000011361 Vega_transcript:OTTMUST00000011361 UCSC:uc011xrc.2 MGI_trans_name:Rhbdd3-009 OTTT:OTTMUST00000011361
definition	note : processed_transcript note : transcript_id=ENSMUST00000129016

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ewsr1 (ENSMUSG00000009079)
Transcript ID	ENSMUST00000063232

Reports
substitution
cSNPs	0
Insertion	15
Deletion	7
SNPs	+1kb 5099399(c.-378G>A), 5099473(c.-452A>G), 5099578(c.-557A>C), 5099840(c.-819G>C), 5099952(c.-931T>C), 5100005(c.-984C>T), 5100132(c.-1111T>G), 5100198(c.-1177A>G), 5100268(c.-1247A>G), 5100278(c.-1257G>A), 5100310(c.-1289C>T), 5100542(c.-1521T>C), 5100840(c.-1819G>T), 5100990(c.-1969T>A), 5101301(c.-2280C>T), 5101306(c.-2285G>A), 5102544(c.-3523A>T), 5102672(c.-3651G>T), 5102702(c.-3681G>A), 5102774(c.-3753C>T), 5102994(c.-3973C>A), 5103065(c.-4044C>A), 5103282(c.-4261A>G), 5103363(c.-4342G>C), 5103382(c.-4361A>G), 5103439(c.-4418C>T), 5103698(c.-4677T>C), 5103854(c.-4833C>T), 5103869(c.-4848G>A), 5103915(c.-4894C>T), 5'UTR CDS 3'UTR 5090490(c.872C>T), 5090719(c.643A>G), 5090991(c.371A>G), INTRON 5091686(c.226+173A>T), 5092302(c.103-320G>A), 5092318(c.103-336C>T), 5093505(c.102+176A>G), 5093529(c.102+152G>A), 5094229(c.14-324G>A), 5094528(c.14-623A>G), 5094870(c.14-965T>C), 5095365(c.14-1460T>C), 5095553(c.14-1648A>C), 5095771(c.14-1866C>A), 5096551(c.13+2458T>C), 5096615(c.13+2394A>G), 5096929(c.13+2080A>G), 5097042(c.13+1967C>T), 5097186(c.13+1823G>A), 5097504(c.13+1505C>T), -1kb 5085478(c.5884T>C), 5085539(c.5823T>C), 5085541(c.5821T>C), 5085590(c.5772T>G), 5085759(c.5603T>C), 5086690(c.4672C>A), 5087378(c.3984T>G), 5087503(c.3859G>A), 5087718(c.3644A>G), 5087805(c.3557C>T), 5087820(c.3542C>T), 5087925(c.3437G>A), 5088084(c.3278A>G), 5088124(c.3238G>C), 5088299(c.3063C>T), 5088384(c.2978G>A), 5088429(c.2933G>A), 5088620(c.2742A>T), 5088904(c.2458T>C), 5089422(c.1940C>T), 5089892(c.1470A>G),
Insertions	+1kb 5100744 (c.-1724dupT), 5102561 (c.-3541dupC), 5'UTR CDS 3'UTR 5090624 (c.737_738insGGGG), 5090939 (c.422dupA), INTRON 5092837 (c.102+843dupA), 5093577 (c.102+99_102+103dupGTTTT), 5094059 (c.14-155_14-154insTTACTTAGCTTAA), 5095703 (c.14-1799_14-1798insT), 5095818 (c.14-1914dupT), 5097083 (c.13+1925_13+1926insATTTA), 5097296 (c.13+1712dupT), 5098415 (c.13+589_13+593dupGCCCG), -1kb 5086690 (c.4671_4672insGA), 5089594 (c.1767_1768insTCT), 5090417 (c.943_*944dupAA),
Deletions	+1kb 5099711 (c.-696_-691delGATCAC), 5100396 (c.-1378_-1376delCTC), 5102945 (c.-3926_-3925delAT), 5'UTR CDS 3'UTR 5090639 (c.718_722delAGAAG), INTRON 5095040 (c.14-1142_14-1136delGTTTTTT), 5096896 (c.13+2110_13+2112delGGT), -1kb 5086273 (c.5087_5088delAA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000063232)	MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT YGQTAYATSYGQPPTVEGTSTGLTILLILAWELLSILSNPVMLTLRCFHLFKP*
MSMv4 transcript	MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT YGQTAYATSYGQPPTVEGTSTGLTILLILAWELLSILSNPVMLTLRCFHLFKP*
homology	100.00 (114 / 114)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ewsr1 (ENSMUSG00000009079)
Transcript ID	ENSMUST00000063232


..........CCTACTTCTCCCACATGGACCCTGGTTTCTTCCGAGTCCTCGCCCGCCAT
GCTAATGTTTGTCTGTGTCTGTCCACTGTGTCAGTAACTCTTAGAAAAGCAAAACCAAAA
ACCCCACCAATCGCCAACAATCCGCCTCAGTGTCCTTCTGGAGCCCTTGTCAGAGACCTC
AGAGCTATGCATATCACACCCTGCCTACCTTGCAGGGAAGCCAGGAGGACAGAGTGGGAA
GGCAAGGACAGTGTGGCGAAGCTTCCCGGCGGTGTACAGAGAGGGGAGGCCCGGGGTCTG
GGTCGCATTCAGCTTTGTAACTTTAAGGAAAGAACTCAATTTCGTGGGTTCTGGGTTTTC
TGTTGAAACAAGGGGATGGGTTGAAGGACGATCACAGGGCTTCTCAACCCCGACCGTTAC
TGGGGTCGGGCGCGGCATTCCCGGCCTCCCTCCCAAGCCGACGGCCCTCGGTCCCCTCCC
CCGCCCGCTCAGGCCACGCGTCCAGGGGCCTGGGGAGCATGTCCTCCCCCCCCCACCCAC
CCTAGAAAACCGAGCAGGGGGGCCCGCCCGGTAAGTCCGGCCGCCGGTTCCAGGCCGAGC
CCTCGGTGCCCGAAACCCGCTGCACGCACACAGGGGCGCGTGATCCCGCCCGCCGATTAG
TCAGCAGTTGTTTCAGGCCGGCCGGGATCCCTTCCCCCAGCCCTCCCACCAGCCTCCGTC
TCCCTCCAGGGCAGACTCTTCAGAGACGGTCCCTAGAGCCAGCGGGCGTAACCATTCCGA
GCCACCGCGCCTCGCGCCAAGGAGCTCTCGGGTTCGTGGGTAACCCTCGCTCACTGGCGC
GCTGGCCCCCGAGGCGCCTTTTTTTTTTAGACCACTCGTCACGTCCGGCTCTTTGGGAGA
GGATCGGGTCAACGGTTTCGGGAGCGAAGAGCCGAAGAGCTCCGGTTCGCTCCTCTTCGG
CCACCCCCGAGGCCTGGCCCGATGGTAGCGTCCGAGGTTGCGGGTTTCGC
GCCTGCGCAGTGCGGCGCCTAGGGGGAACGCGAGAAGGAGACGGACGTTGAGAGAACGAGGAGGAAGGCGAGAAAATGGCGTCCACGG
GTAAGCGGAGTGGGATCGCGGTCCC..........TAATAATTTCTCTTATTTCTTCTAG
ATTACAGTACCTATAGTCAAGCTGCAGCCCAGCAGGG
GTAAGTCAGCTTTCTGCAACAATAA..........TTCTTGTGTTTAATTCTTTTTGCAG
CTACAGTGCTTACACCGCCCAGCCAACTCAAGGATATGCACAGACCACCCAG
GTAATCCCAAAGACAAGGATGAATA..........TATTTCATGAATTTCTTTGGAGCAG
GCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCTACTGATGTCAGCTATACTCAGGCTCAGACCACTGCCACCTACGGGCAGACTGCATATGCAACTTCTTACGGACAGCCTCCCACTG
GTAAGGCCAGCCTTCAAGAGACTAG..........ACTTTTTGTTTTGTGCTTTCCACAG
TAGAAGGGACCAGTACAGGTTTGACTATCCTGCTCATTCTTGCATGGGAATTGCTTTCCATCTTGTCTAACCCTGTAATGTTAACCCTTAGGTGTTTTCATTTGTTTAAACCCTGAACTTTCTAACATCACACACAAAGGTGCTAATGAAAAAACTGCTTCAGGTGCCATTTGCAGATCCATGTCCTTATAATTTGGGGAAGGTTTTACTATGAACTTTGCTTTTGTCGAGCCTTAATAGTTATTTGCCTTCTGAAAGGTATTATTCCAGCTGATTTTCCCTGTTCCCTGAAGGCTAGATTGCATGATTAGTTTCATTTAAGGAAACAGATTTGCCACCCTGCATGTATATGTTTGTCTATAACACAGGCACATTTTATTTTCTGTTTAAGTGTTACAAATTGTTTTAATCCACTTTCTGTTTTAAGTATTTTGAATTTTTTTAATCCATAGTATGTTTTAAATATAAATAGCATTCCAGGACACTGAAAAGAGAAACTGGTCTAAGAATACATTACATGTAATATGCTAAAAAAAAATGGTAATTTTTTTTCCTGTAGAATGTTGTATAAGAAGATCTTAGAAATGTAAAGACTTCCTATTTCAACTATCTGAACTCCTCTGAATTATATTGGTTATAGGAAAATATTCATCTATTGTCAGGGATTTTGTGAGAATTTTACTAACTTAACTACTGTGTAGGGATGGAGGTGTTTATTAACCTAGTGCATATGTGGGGAGAGCTGAAACTAAACCTGTGGATTTGAGAATATAATGGGCCTTTGCTATCCCTAAGCCATTTAACATGGTCCTAAGAAAGGTTTTAAGCAGAGTAGAAGAAGTAAGCAGTCAAGGTTGCATATGCCTTTGATCCCACTCTCAGGCAGAGGCTGAGAACTCTTTGAGTTCAAGGCCAGCATGGTCTACAGAGTGAGTCCCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCTCAAACCCACTTCCCCTCAGAGAGAGAGAAAGAAAGTCAAGTCCTGTA
AGCCTAGAAATAATAGAATACTGCATGCAGGGAAAAAAAAAGATGGCTTTGGTAAGTCAG
ACTGTGTTACATGGTAAAAAGGAGTTTGTGCACACTAGGTGATTCAAAATTACCTCTCAT
ATTCACTCCTGCCAACTGCTTTTAAGCAATAGAATCAAAATTAATCTTTATGGCTTAAGT
AGGAGTCAATAGGTAGGAAACGGGATCGAGCACATTTTTCTCTGCCCCTTGCCTTTACAC
ATAAAAATCAGTAGATGAGTATCAGGGATGGGTAGAAGTACGCTGTTCTCTGGGTTTCTA
AAGGAGGAAAGGTCCAGTGTGTCTACATCTCACATGCAGGAGTCAAACAGTTCTTAATCG
GTGATTTCTGCTGTTCACTATAAACAAACTTTGTTTGTACAGTGTTTCTTACCACCAGTT
CCTTTGAAGAAATCATATAGATGTACTTAGTCTCTTGTCACTGTTCTGTTGATTTTTGTT
CATTTTGCTTGCCTGCTTATGTGTGTGCTACAGTTTAATTAAAAGATTACTAATTAGCCC
AGTATCTGTTACTGTAGAATTGTTACGTCAGGCTCTCTTACTGCAGTTTAGAAATACAAG
TTACTGTCTTCAGCAGTTTGGCTTTTGTTTAACTTCTGTGAATCTTGTAAGTAGGGAGAA
ATCTTATAAAGAGTAATTGGATGTGTGTGGTTACCTTTAGAACTTTGCAACGTTTGCAAC
GAAGTTTTAAATAATAGGGCTGAGGGTGTAGCTTAGTGAAAGGATGCTTCCCCAGCATGT
ATGTGAGGGTCTGGGTTCTATACCTAGCACCACAAAACAAAAACCACTGAAGATAAGCAT
GTCAACTCAAAAGTCTTTAAGACTTTTCTGAAATATATTTTTAATGGTTTTTACCAGCTT
AGGTGGAAAATTACTGTCCTTATATAATTTTAGAATTTCCTTTGAATGCTTGAGAAGAAA
GGATTTTGTCAGTGCTACAAAAAGTACTTAGATTCAAAGA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CCTACTTCTCCCACATGGACCCTGGTTTCTTCCGAGTCCTCGCCCGCCAT GCTAATGTTTGTCTGTGTCTGTCCACTGTGTCAGTAACTCTTAGAAAAGCAAAACCAAAA ACCCCACCAATCGCCAACAATCCGCCTCAGTGTCCTTCTGGAGCCCTTGTCAGAGACCTC AGAGCTATGCATATCACACCCTGCCTACCTTGCAGGGAAGCCAGGAGGACAGAGTGGGAA GGCAAGGACAGTGTGGCGAAGCTTCCCGGCGGTGTACAGAGAGGGGAGGCCCGGGGTCTG GGTCGCATTCAGCTTTGTAACTTTAAGGAAAGAACTCAATTTCGTGGGTTCTGGGTTTTC TGTTGAAACAAGGGGATGGGTTGAAGGACGATCACAGGGCTTCTCAACCCCGACCGTTAC TGGGGTCGGGCGCGGCATTCCCGGCCTCCCTCCCAAGCCGACGGCCCTCGGTCCCCTCCC CCGCCCGCTCAGGCCACGCGTCCAGGGGCCTGGGGAGCATGTCCTCCCCCCCCCACCCAC CCTAGAAAACCGAGCAGGGGGGCCCGCCCGGTAAGTCCGGCCGCCGGTTCCAGGCCGAGC CCTCGGTGCCCGAAACCCGCTGCACGCACACAGGGGCGCGTGATCCCGCCCGCCGATTAG TCAGCAGTTGTTTCAGGCCGGCCGGGATCCCTTCCCCCAGCCCTCCCACCAGCCTCCGTC TCCCTCCAGGGCAGACTCTTCAGAGACGGTCCCTAGAGCCAGCGGGCGTAACCATTCCGA GCCACCGCGCCTCGCGCCAAGGAGCTCTCGGGTTCGTGGGTAACCCTCGCTCACTGGCGC GCTGGCCCCCGAGGCGCCTTTTTTTTTTAGACCACTCGTCACGTCCGGCTCTTTGGGAGA GGATCGGGTCAACGGTTTCGGGAGCGAAGAGCCGAAGAGCTCCGGTTCGCTCCTCTTCGG CCACCCCCGAGGCCTGGCCCGATGGTAGCGTCCGAGGTTGCGGGTTTCGC
1	EXON 1	5099009	5099096	-	1	88	GCCTGCGCAGTGCGGCGCCTAGGGGGAACGCGAGAAGGAGACGGACGTTGAGAGAACGAG GAGGAAGGCGAGAAAATGGCGTCCACGG
	INTRON 1 - 2	5093906	5099008			5103	GTAAGCGGAGTGGGATCGCGGTCCC..........TAATAATTTCTCTTATTTCTTCTAG
2	EXON 2	5093869	5093905	1	2	37	ATTACAGTACCTATAGTCAAGCTGCAGCCCAGCAGGG
	INTRON 2 - 3	5093733	5093868			136	GTAAGTCAGCTTTCTGCAACAATAA..........TTCTTGTGTTTAATTCTTTTTGCAG
3	EXON 3	5093681	5093732	2	0	52	CTACAGTGCTTACACCGCCCAGCCAACTCAAGGATATGCACAGACCACCCAG
	INTRON 3 - 4	5091983	5093680			1698	GTAATCCCAAAGACAAGGATGAATA..........TATTTCATGAATTTCTTTGGAGCAG
4	EXON 4	5091859	5091982	0	1	124	GCATATGGGCAACAAAGCTATGGAACCTATGGACAGCCTACTGATGTCAGCTATACTCAG GCTCAGACCACTGCCACCTACGGGCAGACTGCATATGCAACTTCTTACGGACAGCCTCCC ACTG
	INTRON 4 - 5	5091478	5091858			381	GTAAGGCCAGCCTTCAAGAGACTAG..........ACTTTTTGTTTTGTGCTTTCCACAG
5	EXON 5	5090459	5091477	1	-	1019	TAGAAGGGACCAGTACAGGTTTGACTATCCTGCTCATTCTTGCATGGGAATTGCTTTCCA TCTTGTCTAACCCTGTAATGTTAACCCTTAGGTGTTTTCATTTGTTTAAACCCTGAACTT TCTAACATCACACACAAAGGTGCTAATGAAAAAACTGCTTCAGGTGCCATTTGCAGATCC ATGTCCTTATAATTTGGGGAAGGTTTTACTATGAACTTTGCTTTTGTCGAGCCTTAATAG TTATTTGCCTTCTGAAAGGTATTATTCCAGCTGATTTTCCCTGTTCCCTGAAGGCTAGAT TGCATGATTAGTTTCATTTAAGGAAACAGATTTGCCACCCTGCATGTATATGTTTGTCTA TAACACAGGCACATTTTATTTTCTGTTTAAGTGTTACAAATTGTTTTAATCCACTTTCTG TTTTAAGTATTTTGAATTTTTTTAATCCATAGTATGTTTTAAATATAAATAGCATTCCAG GACACTGAAAAGAGAAACTGGTCTAAGAATACATTACATGTAATATGCTAAAAAAAAATG GTAATTTTTTTTCCTGTAGAATGTTGTATAAGAAGATCTTAGAAATGTAAAGACTTCCTA TTTCAACTATCTGAACTCCTCTGAATTATATTGGTTATAGGAAAATATTCATCTATTGTC AGGGATTTTGTGAGAATTTTACTAACTTAACTACTGTGTAGGGATGGAGGTGTTTATTAA CCTAGTGCATATGTGGGGAGAGCTGAAACTAAACCTGTGGATTTGAGAATATAATGGGCC TTTGCTATCCCTAAGCCATTTAACATGGTCCTAAGAAAGGTTTTAAGCAGAGTAGAAGAA GTAAGCAGTCAAGGTTGCATATGCCTTTGATCCCACTCTCAGGCAGAGGCTGAGAACTCT TTGAGTTCAAGGCCAGCATGGTCTACAGAGTGAGTCCCAGGACAGCCAAGGCTACACAGA AAAACCCTGTCTCAAACCCACTTCCCCTCAGAGAGAGAGAAAGAAAGTCAAGTCCTGTA
	3' upstream sequence						AGCCTAGAAATAATAGAATACTGCATGCAGGGAAAAAAAAAGATGGCTTTGGTAAGTCAG ACTGTGTTACATGGTAAAAAGGAGTTTGTGCACACTAGGTGATTCAAAATTACCTCTCAT ATTCACTCCTGCCAACTGCTTTTAAGCAATAGAATCAAAATTAATCTTTATGGCTTAAGT AGGAGTCAATAGGTAGGAAACGGGATCGAGCACATTTTTCTCTGCCCCTTGCCTTTACAC ATAAAAATCAGTAGATGAGTATCAGGGATGGGTAGAAGTACGCTGTTCTCTGGGTTTCTA AAGGAGGAAAGGTCCAGTGTGTCTACATCTCACATGCAGGAGTCAAACAGTTCTTAATCG GTGATTTCTGCTGTTCACTATAAACAAACTTTGTTTGTACAGTGTTTCTTACCACCAGTT CCTTTGAAGAAATCATATAGATGTACTTAGTCTCTTGTCACTGTTCTGTTGATTTTTGTT CATTTTGCTTGCCTGCTTATGTGTGTGCTACAGTTTAATTAAAAGATTACTAATTAGCCC AGTATCTGTTACTGTAGAATTGTTACGTCAGGCTCTCTTACTGCAGTTTAGAAATACAAG TTACTGTCTTCAGCAGTTTGGCTTTTGTTTAACTTCTGTGAATCTTGTAAGTAGGGAGAA ATCTTATAAAGAGTAATTGGATGTGTGTGGTTACCTTTAGAACTTTGCAACGTTTGCAAC GAAGTTTTAAATAATAGGGCTGAGGGTGTAGCTTAGTGAAAGGATGCTTCCCCAGCATGT ATGTGAGGGTCTGGGTTCTATACCTAGCACCACAAAACAAAAACCACTGAAGATAAGCAT GTCAACTCAAAAGTCTTTAAGACTTTTCTGAAATATATTTTTAATGGTTTTTACCAGCTT AGGTGGAAAATTACTGTCCTTATATAATTTTAGAATTTCCTTTGAATGCTTGAGAAGAAA GGATTTTGTCAGTGCTACAAAAAGTACTTAGATTCAAAGA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Ewsr1 (ENSMUSG00000009079)
Transcript ID	ENSMUST00000063232

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 114 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information