MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Ccnb1 (ENSMUSG00000041431)

Cross Reference

CCDS	CCDS36768.1
EMBL	AK143597, AK163259, AK166686, ...show all
Fantom	B020006O13, F420013K15, I1C0002J21, ...show all
GO	GO:0000278, GO:0000922, GO:0000922, ...show all
goslim_goa	GO:0000228, GO:0003674, GO:0005575, ...show all
MGI_trans_name	Ccnb1-001
OTTP	OTTMUSP00000022997
OTTT	OTTMUST00000049582
protein_id	AAB22970.1, AAH11478.1, AAH85238.1, ...show all
Reactome	R-MMU-113507, R-MMU-113510, R-MMU-162658, ...show all

RefSeq_mRNA	NM_172301.3
RefSeq_peptide	NP_758505
UCSC	uc007rro.1
UniParc	UPI000000190C
Uniprot/SPTREMBL	Q3TQW9
Uniprot/SWISSPROT	P24860
Vega_transcript	Ccnb1-001, OTTMUST00000049582
Vega_translation	215043, OTTMUSP00000022997

Definition

protein_id:ENSMUSP00000071989
translation:

MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARV
PLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVD
NPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEE
EQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKM
LQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPL
HFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTP
TLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLV
QNLSKAVTKA

Chromosome

Length
Position(start - end)

6723
100779678 - 100786402

Orient to Chromosome

minus

Link

Location : (13:100779678-100786402)
/

Detail Map

name	Ccnb1 (ENSMUSG00000041431)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Ccnb1 note : cyclin B1 [Source:MGI Symbol;Acc:MGI:88302]

name	Ccnb1 (ENSMUSG00000041431)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000072119

name	Ccnb1 (ENSMUSG00000041431)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000091295

name	Ccnb1 (ENSMUSG00000041431)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000174038

name	Ccnb1 (ENSMUSG00000041431) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS36768.1 Uniprot/SWISSPROT:P24860 RefSeq_peptide:NP_758505 RefSeq_mRNA:NM_172301.3 Vega_transcript:Ccnb1-001 Vega_transcript:OTTMUST00000049582 Uniprot/SPTREMBL:Q3TQW9 UCSC:uc007rro.1 Fantom:B020006O13 Fantom:F420013K15 Fantom:I1C0002J21 Fantom:I920020K05 Fantom:I920028K07 EMBL:AK143597 EMBL:AK163259 EMBL:AK166686 EMBL:AK168441 EMBL:AK168502 EMBL:BC011478 EMBL:BC085238 EMBL:CH466567 EMBL:S43105 EMBL:X58708 EMBL:X64713 GO:GO:0000278 GO:GO:0000922 GO:GO:0000922 GO:GO:0000942 GO:GO:0000942 GO:GO:0001556 GO:GO:0001701 GO:GO:0001933 GO:GO:0005113 GO:GO:0005113 GO:GO:0005515 GO:GO:0005515 GO:GO:0005634 GO:GO:0005634 GO:GO:0005737 GO:GO:0005737 GO:GO:0005737 GO:GO:0005813 GO:GO:0005813 GO:GO:0006461 GO:GO:0006468 GO:GO:0007080 GO:GO:0007080 GO:GO:0007283 GO:GO:0009612 GO:GO:0009636 GO:GO:0010629 GO:GO:0016020 GO:GO:0016301 GO:GO:0019901 GO:GO:0019901 GO:GO:0019901 GO:GO:0031442 GO:GO:0033129 GO:GO:0035173 GO:GO:0042246 GO:GO:0042493 GO:GO:0043148 GO:GO:0043148 GO:GO:0045787 GO:GO:0045931 GO:GO:0045931 GO:GO:0046680 GO:GO:0048146 GO:GO:0048565 GO:GO:0051301 GO:GO:0051726 GO:GO:0051987 GO:GO:0051987 GO:GO:0055015 GO:GO:0060045 GO:GO:0060623 GO:GO:0071283 GO:GO:0071398 GO:GO:0071407 GO:GO:0071456 GO:GO:0090266 GO:GO:0090266 GO:GO:2000775 MGI_trans_name:Ccnb1-001 Vega_translation:215043 Vega_translation:OTTMUSP00000022997 goslim_goa:GO:0000228 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0006464 goslim_goa:GO:0007049 goslim_goa:GO:0007059 goslim_goa:GO:0007067 goslim_goa:GO:0008150 goslim_goa:GO:0009790 goslim_goa:GO:0016301 goslim_goa:GO:0019899 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 goslim_goa:GO:0051301 protein_id:AAB22970.1 protein_id:AAH11478.1 protein_id:AAH85238.1 protein_id:BAE25456.1 protein_id:BAE37263.1 protein_id:BAE38945.1 protein_id:BAE40346.1 protein_id:BAE40387.1 protein_id:CAA41545.1 protein_id:CAA45968.1 protein_id:EDL00785.1 OTTP:OTTMUSP00000022997 OTTT:OTTMUST00000049582 Reactome:R-MMU-113507 Reactome:R-MMU-113510 Reactome:R-MMU-162658 Reactome:R-MMU-1640170 Reactome:R-MMU-174048 Reactome:R-MMU-174143 Reactome:R-MMU-176408 Reactome:R-MMU-176409 Reactome:R-MMU-176412 Reactome:R-MMU-176417 Reactome:R-MMU-176814 Reactome:R-MMU-2299718 Reactome:R-MMU-2465910 Reactome:R-MMU-2500257 Reactome:R-MMU-2514853 Reactome:R-MMU-2565942 Reactome:R-MMU-2980766 Reactome:R-MMU-2980767 Reactome:R-MMU-3301854 Reactome:R-MMU-380270 Reactome:R-MMU-380287 Reactome:R-MMU-380320 Reactome:R-MMU-4419969 Reactome:R-MMU-453274 Reactome:R-MMU-453276 Reactome:R-MMU-453279 Reactome:R-MMU-68875 Reactome:R-MMU-68877 Reactome:R-MMU-68886 Reactome:R-MMU-69206 Reactome:R-MMU-69273 Reactome:R-MMU-69275 Reactome:R-MMU-69278 Reactome:R-MMU-69473 Reactome:R-MMU-69478 Reactome:R-MMU-69481 Reactome:R-MMU-69620 Reactome:R-MMU-75035 UniParc:UPI000000190C
definition	note : transcript_id=ENSMUST00000072119 protein_id : ENSMUSP00000071989 translation : MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARVPLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVDNPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEEEQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTPTLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLVQNLSKAVTKA

name	Ccnb1 (ENSMUSG00000041431) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_mRNA_predicted:XM_011244665.1 RefSeq_peptide_predicted:XP_011242967.1 Vega_transcript:Ccnb1-002 Vega_transcript:OTTMUST00000049583 Uniprot/SPTREMBL:Q68EM3 UCSC:uc007rrp.1 EMBL:AC112701 EMBL:BC080202 GO:GO:0000922 GO:GO:0000942 GO:GO:0001701 GO:GO:0005113 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006468 GO:GO:0007080 GO:GO:0016020 GO:GO:0016301 GO:GO:0019901 GO:GO:0043148 GO:GO:0045787 GO:GO:0045931 GO:GO:0048146 GO:GO:0051987 GO:GO:0090266 GO:GO:2000775 MGI_trans_name:Ccnb1-002 Vega_translation:215044 Vega_translation:OTTMUSP00000022998 goslim_goa:GO:0000228 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0006464 goslim_goa:GO:0007049 goslim_goa:GO:0007059 goslim_goa:GO:0007067 goslim_goa:GO:0008150 goslim_goa:GO:0009790 goslim_goa:GO:0016301 goslim_goa:GO:0019899 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 protein_id:AAH80202.1 OTTP:OTTMUSP00000022998 OTTT:OTTMUST00000049583 UniParc:UPI00001E7FC6
definition	note : transcript_id=ENSMUST00000091295 protein_id : ENSMUSP00000088841 translation : MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARVPLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILEEQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTPTLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLVQNLSKAVTKA

name	Ccnb1 (ENSMUSG00000041431) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Ccnb1-007 Vega_transcript:OTTMUST00000097997 Uniprot/SPTREMBL:G3UY65 UCSC:uc007rro.1 EMBL:AC112701 GO:GO:0000922 GO:GO:0000942 GO:GO:0001701 GO:GO:0005113 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006468 GO:GO:0007080 GO:GO:0016020 GO:GO:0016301 GO:GO:0019901 GO:GO:0043148 GO:GO:0045787 GO:GO:0045931 GO:GO:0048146 GO:GO:0051987 GO:GO:0090266 GO:GO:2000775 MGI_trans_name:Ccnb1-007 Vega_translation:215045 Vega_translation:OTTMUSP00000054991 goslim_goa:GO:0000228 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0006464 goslim_goa:GO:0007049 goslim_goa:GO:0007059 goslim_goa:GO:0007067 goslim_goa:GO:0008150 goslim_goa:GO:0009790 goslim_goa:GO:0016301 goslim_goa:GO:0019899 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0048856 goslim_goa:GO:0051276 OTTP:OTTMUSP00000054991 OTTT:OTTMUST00000097997 UniParc:UPI00021CF76D
definition	note : transcript_id=ENSMUST00000174038 protein_id : ENSMUSP00000133962 translation : MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARVPLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVDNPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEEEQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPLHFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTVKNKYAASKHAKISTLAQLNCTLVQNLSKAVTKA

name
type	misc_feature
link
xref
definition	note : contig AC112701.6 1..84050(-1)

name	Ccnb1 (ENSMUSG00000041431)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049584 Vega_transcript:OTTMUST00000049584 MGI_trans_name:Ccnb1-003 OTTT:OTTMUST00000049584
definition	note : retained_intron note : transcript_id=ENSMUST00000147790

name	Ccnb1 (ENSMUSG00000041431)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049587 Vega_transcript:OTTMUST00000049587 MGI_trans_name:Ccnb1-006 OTTT:OTTMUST00000049587
definition	note : retained_intron note : transcript_id=ENSMUST00000134080

name	Ccnb1 (ENSMUSG00000041431)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049586 Vega_transcript:OTTMUST00000049586 MGI_trans_name:Ccnb1-005 OTTT:OTTMUST00000049586
definition	note : retained_intron note : transcript_id=ENSMUST00000128279

name	Ccnb1 (ENSMUSG00000041431)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000049585 Vega_transcript:OTTMUST00000049585 MGI_trans_name:Ccnb1-004 OTTT:OTTMUST00000049585
definition	note : retained_intron note : transcript_id=ENSMUST00000142056

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ccnb1 (ENSMUSG00000041431)
Transcript ID	ENSMUST00000072119

Reports
substitution
cSNPs	4
Insertion	14
Deletion	21
SNPs	+1kb 100786733(c.-331A>G), 100786739(c.-337A>T), 100787853(c.-1451T>C), 100787872(c.-1470G>A), 100788196(c.-1794C>T), 100788372(c.-1970C>T), 100788404(c.-2002T>C), 100788411(c.-2009A>G), 100788730(c.-2328T>C), 100788768(c.-2366G>A), 100788901(c.-2499G>T), 100789216(c.-2814G>C), 100789298(c.-2896C>T), 100789611(c.-3209A>G), 100790040(c.-3638G>T), 100790115(c.-3713G>A), 100790248(c.-3846A>G), 100790256(c.-3854C>T), 100790258(c.-3856C>A), 100790471(c.-4069T>C), 100790612(c.-4210G>T), 100790733(c.-4331G>A), 100791082(c.-4680A>G), 100791206(c.-4804C>T), 100791272(c.-4870G>A), 5'UTR 100786543(c.-141G>A), CDS 100780064(c.1143T>G), 100781368(c.723A>G), 100783528(c.474G>A), 100783624(c.378G>A), 3'UTR 100778658(c.1020C>A), 100778712(c.966G>C), 100779609(c.69G>A), 100779610(c.68C>T), 100779670(c.8A>G), INTRON 100779832(c.1186-47A>C), 100780259(c.1075-127A>T), 100780265(c.1075-133C>G), 100780353(c.1075-221A>G), 100780433(c.1075-301T>C), 100780447(c.1075-315A>G), 100780536(c.1074+240A>G), 100780540(c.1074+236G>A), 100780647(c.1074+129G>A), 100780662(c.1074+114C>T), 100780700(c.1074+76T>C), 100780740(c.1074+36G>A), 100780745(c.1074+31G>C), 100781066(c.933+92A>C), 100782115(c.538-332C>A), 100782116(c.538-333T>A), 100782459(c.538-676T>C), 100782551(c.538-768A>G), 100782585(c.538-802C>T), 100782685(c.537+780G>C), 100782949(c.537+516G>A), 100783002(c.537+463T>G), 100783199(c.537+266A>G), 100783286(c.537+179C>A), 100783697(c.355-50G>A), 100783712(c.355-65C>G), 100783729(c.355-82C>A), 100783751(c.355-104G>A), 100783815(c.355-168A>T), 100783949(c.355-302C>T), 100783969(c.355-322G>T), 100784041(c.355-394C>T), 100784354(c.355-707G>A), 100784401(c.355-754T>A), 100784434(c.355-787G>A), 100784444(c.355-797C>A), 100784681(c.354+776T>C), 100784693(c.354+764A>G), 100785058(c.354+399A>G), 100785132(c.354+325A>G), 100786034(c.22-131A>G), 100786270(c.21+112T>C), -1kb 100773717(c.5961T>C), 100773770(c.5908T>C), 100773864(c.5814T>C), 100774108(c.5570T>C), 100774146(c.5532C>T), 100774167(c.5511C>T), 100774343(c.5335C>T), 100774399(c.5279A>G), 100774442(c.5236A>G), 100774445(c.5233A>G), 100774537(c.5141G>A), 100774694(c.4984C>A), 100774757(c.4921T>A), 100774861(c.4817G>A), 100774863(c.4815G>T), 100775000(c.4678T>A), 100775016(c.4662T>C), 100775073(c.4605C>T), 100775117(c.4561A>C), 100775226(c.4452A>G), 100775238(c.4440A>G), 100775351(c.4327A>G), 100775422(c.4256G>C), 100775443(c.4235G>C), 100775498(c.4180A>T), 100775632(c.4046T>C), 100775704(c.3974T>C), 100775716(c.3962T>C), 100775747(c.3931A>G), 100775753(c.3925A>G), 100775804(c.3874C>T), 100775924(c.3754A>T), 100775937(c.3741G>T), 100775982(c.3696A>G), 100776075(c.3603C>A), 100776105(c.3573C>T), 100776141(c.3537T>C), 100776154(c.3524G>T), 100776177(c.3501T>G), 100776178(c.3500C>A), 100776182(c.3496A>G), 100776205(c.3473G>A), 100776217(c.3461T>C), 100776278(c.3400T>C), 100776342(c.3336C>T), 100776376(c.3302C>T), 100776435(c.3243G>C), 100776533(c.3145A>G), 100776554(c.3124A>G), 100776634(c.3044G>A), 100776655(c.3023C>A), 100776699(c.2979T>C), 100776704(c.2974C>G), 100776893(c.2785C>T), 100776998(c.2680A>T), 100776999(c.2679A>G), 100777120(c.2558T>G), 100777158(c.2520C>T), 100777217(c.2461G>A), 100777218(c.2460T>C), 100777251(c.2427G>A), 100777268(c.2410A>G), 100777337(c.2341C>A), 100777349(c.2329C>T), 100777399(c.2279G>A), 100777411(c.2267T>C), 100777465(c.2213C>G), 100777471(c.2207A>G), 100777509(c.2169T>C), 100777531(c.2147C>T), 100777535(c.2143T>C), 100777550(c.2128G>A), 100777585(c.2093G>C), 100777685(c.1993T>G), 100777808(c.1870A>G), 100777976(c.1702G>C), 100778008(c.1670T>C), 100778108(c.1570G>A), 100778142(c.1536G>A), 100778162(c.1516T>C), 100778192(c.1486A>G), 100778196(c.1482C>T), 100778550(c.1128T>C), 100778628(c.*1050A>G),
Insertions	+1kb 100790414 (c.-4013_-4012insGCAG), 100790959 (c.-4558_-4557insA), 100791056 (c.-4655_-4654insT), 5'UTR CDS 3'UTR INTRON 100780434 (c.1075-303_1075-302insAAAA), 100780439 (c.1075-308_1075-307insAA), 100782782 (c.537+682_537+683insATA), -1kb 100773691 (c.5986_5987insG), 100774549 (c.5128_5129insCAAA), 100774962 (c.4715dupA), 100777379 (c.2298_2299insAAT), 100778015 (c.1662_1663insC), 100778047 (c.1630_1631insGG), 100778541 (c.1136_1137insT), 100778607 (c.1070_*1071insC),
Deletions	+1kb 100786684 (c.-283delG), 100789831 (c.-3438_-3430delAGTGTTGGT), 100790670 (c.-4269delA), 100790678 (c.-4277delG), 5'UTR CDS 3'UTR 100779385 (c.286_292delTCTTCTG), 100779537 (c.138_140delTGC), 100779583 (c.94delT), INTRON 100779853 (c.1186-70_1186-69delAC), 100780339 (c.1075-209_1075-208delCA), 100780372 (c.1075-243_1075-241delAGG), 100781066 (c.933+83_933+91delTTATACATT), 100782118 (c.538-337_538-336delAC), 100782122 (c.538-340delC), -1kb 100774045 (c.5629_5632delTTTA), 100775526 (c.4150_4151delAG), 100776189 (c.3487_3488delAT), 100776622 (c.3049_3055delAGTGGCA), 100777537 (c.2135_2140delATCCTT), 100777596 (c.2071_2081delATAAAGATAAA), 100778038 (c.1635_1639delCAACT), 100778521 (c.1154_*1156delTTC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	0
synonymous substitutions	100780064 (p.Ala381Ala), 100781368 (p.Leu241Leu), 100783528 (p.Gly158Gly), 100783624 (p.Pro126Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000072119)	MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARV PLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVD NPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEE EQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKM LQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPL HFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTP TLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLV QNLSKAVTKA*
MSMv4 transcript	MALRVTRNTKINAENKAKVSMAGAKRVPVTVTAASKPGLRPRTALGDIGNKVSEELQARV PLKREAKTLGTGKGTVKALPKPVEKVPVCEPEVELAEPEPEPELEHVREEKLSPEPILVD NPSPSPMETSGCAPAEEYLCQAFSDVILAVSDVDADDGADPNLCSEYVKDIYAYLRQLEE EQSVRPKYLQGREVTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNSCVPKKM LQLVGVTAMFIASKYEEMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFSLGRPLPL HFLRRASKVGEVDVEQHTLAKYLMELSMLDYDMVHFAPSQIAAGAFCLALKILDNGEWTP TLQHYLSYSEDSLLPVMQHLAKNVVMVNCGLTKHMTVKNKYAASKHAKISTLAQLNCTLV QNLSKAVTKA*
homology	100.00 (431 / 431)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Ccnb1 (ENSMUSG00000041431)
Transcript ID	ENSMUST00000072119


..........AGTCCTTTTTATAGCAAGCCAGGCCTACCTGGCTGTTGCTAGGTAACTGT
TGGGCGGAGCATAGAAGGAATGCCAACAACCTGTGCTACAAGAGATCCTGGTCAATAAAT
AAATCCGCGTTAGTGTTACTGAAAATTAATGTGGAAAATTTCACTGAAGTTAATAAGCCT
TAATAAGGAGTTTGACATAGAAAGATAGAGAGTTGCAATAGAGATCTTTGTTAAATAAGA
TTTTACAAAACTATATTTTTGGAGTAATCTTAAACTTAGAGCAAAATTAAGCATAAGGCA
CATTTTCTTTTATCACTGGGGCAGTCGCTATTGGGGAGCTTGGTATGTTAATCTATTTGC
TTATAATAACCATTTACAGCTGGGCGGTGGTGGCACACGCCTTTAATCCCAGCACTTGGG
AGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTATACAGAGTGAGTTTCAG
GACAGCCAGGCCTATACAGAGAAACCCTGTCTCGAAAAAACAAAAAGCAAAAACAAAACA
AAAAACATTTACTATGTGTATGTGTGCTAAAACTTCATGCTATCAACCTCAAAATCCATC
CCAGATAGCTGTTGGAACAGTCATATTAAAGACCGTCTCTGCAACAAAGCTTTCGGGAAC
TCTTAAGATAGTATTGGCACTTCTATAGAAGAGGATGAGAAACAATAAATAGGACAACAG
CAAAACTGATATGCGTACTCCCCACAGTCATTTTCCTAAAGTCCAACGGAGTCGCCTGGG
CTAGCTTGGACAGCACACAAGTGAGCACTGCACGCCATGCCTACCTAAGGCAGGTGGCAG
CTATGCGGCTTGTGCGCAGGCATAGAGCCTGACCTCGCGAGGGGTGGGCGGTGCTGCCAG
CGGCAGCCTCGCTCTGGCCCCGCCCCCGCCCCACCCCCGCCGAACTTGGGATCGCGGGAT
CGCCCAGGAAACGCATTCTACGGGAACCCGCGGCGCCAATGGGAAGAGAG
CGAGTGCCACGAACTGGCCAATGAGGAACGAGCGGCCCGGGGTTTAAACCTAAGCCCGGCAGACTCCTCCCGGCGTGCTGCGGAGGAACGGCTGTTAGTGTTTAGCTGTGGATAGCCAGAGGTTAGGGTGTCTTCTCGAATCGGGGAACCTCTGATTTTGGAGGAGCCATGGCGCTCAGGGTCACTAGG
GTGAGTCGGGCCAGGCGCTGCGGTG..........CAAGTTGTTCTTTTACTTCTTTCAG
AACACGAAAATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTGCCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACCGAGAACTGCTCTTGGAGACATTGGTAATAAAGTCAGCGAAGAGCTACAGGCAAGAGTGCCTCTGAAAAGG
GTAACTATCGCCCTGAAAAGGGTAC..........TCTGTTCTCTCCCTTTCATCCACAG
GAAGCAAAAACGCTAGGTACTGGAAAAGGTACTGTTAAAGCCCTACCAAAACCTGTAGAGAAGGTGCCTGTGTGTGAACCAGAGGTGGAACTTGCTGAGCCTGAGCCTGAACCTGAACTTGAACATGTTAGAGAAGAGAAGCTTTCTCCTGAACCTATTTTG
GTAAACTTGCATTTTTTAAAAGTTT..........TTTCACGGAGCCTCTCTTTTTTAAG
GTTGATAATCCCTCTCCAAGCCCAATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTATCTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGAGCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCTTATCTCCGACAACTGGAG
GTCAGTATTGTCATTGCAGTCTGCC..........AAATAACTGACATTTTCTTTTGTAG
GAAGAGCAGTCAGTTAGACCAAAATACCTACAGGGTCGTGAAGTGACTGGAAACATGAGAGCTATCCTCATTGACTGGCTAATACAGGTTCAGATGAAATTTAGGCTGCTTCAGGAGACCATGTACATGACTGTGTCCATTATTGATCGGTTCATGCAG
GTATGTGTCATTCAGTAATTGAGAG..........CTGTTGATTGAACTTGCCATTGCAG
AACAGTTGTGTGCCCAAGAAGATGCTGCAGCTGGTCGGTGTAACGGCCATGTTTATTGCAAGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAACACGTACACTAAGCACCAGATCAGACAGATGGAGATGAAGATTCTCAGAGTTCTGAACTTCAGCCTGGGTCGCCCTCTGCCTCTGCACTTCCTCCGTAGAGCATCTAAAGTCGGAGAG
GTACAGATTCCTCGAGAAATGTTTG..........CTTAGAGTGGTGTGGTCTGTTCCAG
GTTGACGTCGAGCAGCACACTTTGGCCAAATACCTCATGGAGCTCTCCATGCTGGACTACGACATGGTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGCTTTCTGCTTAGCGCTGAAAATTCTTGACAACGGTGAATGG
GTAAGCTGTCTCACCAAACTACCAA..........TTTAAGCATGTTTTTGTTCTCTTAG
ACACCAACTCTGCAGCACTACCTATCCTACAGTGAAGACTCCCTGCTTCCTGTTATGCAGCACCTGGCGAAGAATGTAGTCATGGTGAACTGTGGCCTCACAAAGCACATG
GTGAGTCCATTGAAAATTTAAGGCT..........TGATTGCAGTGCTTTTCTCTTACAG
ACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTGAACTGTACACTAGTTCAGAATTTGTCTAAGGCCGTGACAAAGGCATAACTCCAATGGACTGCTACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACTATGTTTACTTGCTCTTCAATAAAGGTTGTGACTTCTCATTTTACATAGCTTAACTCATTTGAATGTTGTTGCTTCTGAGTTTAGGCTAACGGAAGTTGTCGAATTTAGGAGTATATTAAAAACTGCATCTAGTTTTAACAGTGGATCCAACTAATGTATATATCTGTAGCCTATATGTCTATATACATCCTTCACTGTGTGTCCTTATATCATCATGTCTTCTGCCTCACTCTAGTTTAAACTCTAAATCTACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTTAACCACTGTCTCTTGGTTTGTCAACTTTCAGATCTGAAACCAAGTATCTTTTTTTATGTAATTATTTATTTGTTCTTAATTGGAAAATAGGATGTTCAAAATTAAAGGTGTGTTTTAAAAAGAATTTGCCCCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTTGTATATCCTGTATAGATATAATCATGCATATACTCCCAAGGAGATATTTTTATATGGGTTCATTTTATCAACAGTATTCCTATCAGCATTCCTTTCAATGCCTATATTGCATTTCCTAGTGTGAACAAACTGTGTGTAACATAGTCATTCCCTCGGTGGGATTCAAGTGCATTCTCTCAGTGCCCTCCACAGTGTTCTTAAATGATGTTTAATGTCTTGCTTGGCTTCATTCATAGTAGCTCTTCCAGGGGTGTGCTTTGAATTCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATGCCACCTGGAAAAGAATCCTGTCTCATTTGCTGTTTTAATTTATACATCTGATATCAAGTTGAATAAAATTTATTGGTGGAAAGCTTTCACAATTCTCATTTGCCCTTTTGACTCTTTATGTTGTCTTTGCAATATGGAGACTTTATGTTGCTAATAAACATAGTTTTAGATTTTCA
GCCAAGGTCGGCCAACTCCCAGGTGTGCACACCTTGTAATCCAGCCCAGGTTTTTAAGTG
TACATATCTGATCTAAATGGTGTTATTCCCCTGTAATAATAGGACTTTTTTTTTCTTTTC
TTTTTTTCTCTCTCTTTTTTAATATATTTTTCAAAAAAGGATGTCCAATCCCCTGGAACT
GGAGTTACAGTTATAAACTGACATTTGCCTACTGGGAATTGAACCCAGGTTTTCTGGAAG
AACAGCCAGTGCTCTTAACCACTGGGCCAATTGTCCAGCCCATGATAGGAATTTTTAAAA
CTGAGTTCTAAGAGTTTCTGTGGCTACATACGGCTTAACGAGTGCATCTGCGTGTATCTT
GTTACTTGGAAACTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGG
CTGTCCTGGAGCTCACTCTGTAGACCAGGCTGGTCTCGAACTCAGAAGTCCACCTGCCTC
TGCCTCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCAGCACTTAGAAACCTCT
TATTGGGCCTTCACTGTATAATCCTGAGGGTCCTTACCCTCGTGCTGGGGTTTTCACTTT
AAAAATCAACTACTTTTTTGATTTTTGATAATTTCCCTTTATCTTTCTTCAACCCACCCT
CACCTGGAATTCTCAAGTTCATGGCCTTTGGCTTTTATTGTTGTGCATATGTTCATAAAC
ATATAACCTGCTCAGTAGTGGTCCTTGTATGTATATAACTTCAGCACTGCCCACTGTAGT
TGTCCTGATTGGGCCCCATGACTTTCCCCTTCTGTGTTAGCATCACCCTTGCTGAAGGTT
GGTTTAGGCTTGTTTAGTGTTGAAACTTCATGGGTGTAGCTTCCCTGACATTGAGGAGAC
AGAATTTCAAGCAGTCTTTCTAGTCCCCTGGCGCCTAATATCTGTGCCTCCTCTCCAGTG
TTCTGCAGTGCAGGCGTTGTTGATAACATGAGCTGGGCTG..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AGTCCTTTTTATAGCAAGCCAGGCCTACCTGGCTGTTGCTAGGTAACTGT TGGGCGGAGCATAGAAGGAATGCCAACAACCTGTGCTACAAGAGATCCTGGTCAATAAAT AAATCCGCGTTAGTGTTACTGAAAATTAATGTGGAAAATTTCACTGAAGTTAATAAGCCT TAATAAGGAGTTTGACATAGAAAGATAGAGAGTTGCAATAGAGATCTTTGTTAAATAAGA TTTTACAAAACTATATTTTTGGAGTAATCTTAAACTTAGAGCAAAATTAAGCATAAGGCA CATTTTCTTTTATCACTGGGGCAGTCGCTATTGGGGAGCTTGGTATGTTAATCTATTTGC TTATAATAACCATTTACAGCTGGGCGGTGGTGGCACACGCCTTTAATCCCAGCACTTGGG AGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTATACAGAGTGAGTTTCAG GACAGCCAGGCCTATACAGAGAAACCCTGTCTCGAAAAAACAAAAAGCAAAAACAAAACA AAAAACATTTACTATGTGTATGTGTGCTAAAACTTCATGCTATCAACCTCAAAATCCATC CCAGATAGCTGTTGGAACAGTCATATTAAAGACCGTCTCTGCAACAAAGCTTTCGGGAAC TCTTAAGATAGTATTGGCACTTCTATAGAAGAGGATGAGAAACAATAAATAGGACAACAG CAAAACTGATATGCGTACTCCCCACAGTCATTTTCCTAAAGTCCAACGGAGTCGCCTGGG CTAGCTTGGACAGCACACAAGTGAGCACTGCACGCCATGCCTACCTAAGGCAGGTGGCAG CTATGCGGCTTGTGCGCAGGCATAGAGCCTGACCTCGCGAGGGGTGGGCGGTGCTGCCAG CGGCAGCCTCGCTCTGGCCCCGCCCCCGCCCCACCCCCGCCGAACTTGGGATCGCGGGAT CGCCCAGGAAACGCATTCTACGGGAACCCGCGGCGCCAATGGGAAGAGAG
1	EXON 1	100786382	100786570	-	0	189	CGAGTGCCACGAACTGGCCAATGAGGAACGAGCGGCCCGGGGTTTAAACCTAAGCCCGGC AGACTCCTCCCGGCGTGCTGCGGAGGAACGGCTGTTAGTGTTTAGCTGTGGATAGCCAGA GGTTAGGGTGTCTTCTCGAATCGGGGAACCTCTGATTTTGGAGGAGCCATGGCGCTCAGG GTCACTAGG
	INTRON 1 - 2	100785904	100786381			478	GTGAGTCGGGCCAGGCGCTGCGGTG..........CAAGTTGTTCTTTTACTTCTTTCAG
2	EXON 2	100785733	100785903	0	0	171	AACACGAAAATTAACGCAGAAAATAAGGCCAAGGTCAGTATGGCAGGCGCCAAGCGTGTG CCTGTGACAGTTACTGCTGCTTCCAAGCCCGGGCTGAGACCGAGAACTGCTCTTGGAGAC ATTGGTAATAAAGTCAGCGAAGAGCTACAGGCAAGAGTGCCTCTGAAAAGG
	INTRON 2 - 3	100785619	100785732			114	GTAACTATCGCCCTGAAAAGGGTAC..........TCTGTTCTCTCCCTTTCATCCACAG
3	EXON 3	100785457	100785618	0	0	162	GAAGCAAAAACGCTAGGTACTGGAAAAGGTACTGTTAAAGCCCTACCAAAACCTGTAGAG AAGGTGCCTGTGTGTGAACCAGAGGTGGAACTTGCTGAGCCTGAGCCTGAACCTGAACTT GAACATGTTAGAGAAGAGAAGCTTTCTCCTGAACCTATTTTG
	INTRON 3 - 4	100783648	100785456			1809	GTAAACTTGCATTTTTTAAAAGTTT..........TTTCACGGAGCCTCTCTTTTTTAAG
4	EXON 4	100783465	100783647	0	0	183	GTTGATAATCCCTCTCCAAGCCCAATGGAAACATCTGGATGTGCGCCTGCAGAAGAGTAT CTGTGTCAGGCTTTCTCTGATGTAATCCTTGCAGTGAGTGACGTAGACGCAGATGATGGA GCTGACCCAAACCTCTGTAGTGAATATGTGAAAGATATCTATGCTTATCTCCGACAACTG GAG
	INTRON 4 - 5	100781784	100783464			1681	GTCAGTATTGTCATTGCAGTCTGCC..........AAATAACTGACATTTTCTTTTGTAG
5	EXON 5	100781625	100781783	0	0	159	GAAGAGCAGTCAGTTAGACCAAAATACCTACAGGGTCGTGAAGTGACTGGAAACATGAGA GCTATCCTCATTGACTGGCTAATACAGGTTCAGATGAAATTTAGGCTGCTTCAGGAGACC ATGTACATGACTGTGTCCATTATTGATCGGTTCATGCAG
	INTRON 5 - 6	100781395	100781624			230	GTATGTGTCATTCAGTAATTGAGAG..........CTGTTGATTGAACTTGCCATTGCAG
6	EXON 6	100781158	100781394	0	0	237	AACAGTTGTGTGCCCAAGAAGATGCTGCAGCTGGTCGGTGTAACGGCCATGTTTATTGCA AGCAAATATGAGGAGATGTACCCTCCAGAAATAGGTGACTTCGCCTTTGTGACTAACAAC ACGTACACTAAGCACCAGATCAGACAGATGGAGATGAAGATTCTCAGAGTTCTGAACTTC AGCCTGGGTCGCCCTCTGCCTCTGCACTTCCTCCGTAGAGCATCTAAAGTCGGAGAG
	INTRON 6 - 7	100780917	100781157			241	GTACAGATTCCTCGAGAAATGTTTG..........CTTAGAGTGGTGTGGTCTGTTCCAG
7	EXON 7	100780776	100780916	0	0	141	GTTGACGTCGAGCAGCACACTTTGGCCAAATACCTCATGGAGCTCTCCATGCTGGACTAC GACATGGTGCATTTTGCTCCTTCTCAAATTGCAGCTGGGGCTTTCTGCTTAGCGCTGAAA ATTCTTGACAACGGTGAATGG
	INTRON 7 - 8	100780133	100780775			643	GTAAGCTGTCTCACCAAACTACCAA..........TTTAAGCATGTTTTTGTTCTCTTAG
8	EXON 8	100780022	100780132	0	0	111	ACACCAACTCTGCAGCACTACCTATCCTACAGTGAAGACTCCCTGCTTCCTGTTATGCAG CACCTGGCGAAGAATGTAGTCATGGTGAACTGTGGCCTCACAAAGCACATG
	INTRON 8 - 9	100779786	100780021			236	GTGAGTCCATTGAAAATTTAAGGCT..........TGATTGCAGTGCTTTTCTCTTACAG
9	EXON 9	100778650	100779785	0	-	1136	ACTGTCAAGAACAAGTATGCAGCATCTAAGCATGCTAAGATCAGCACGCTGGCACAGCTG AACTGTACACTAGTTCAGAATTTGTCTAAGGCCGTGACAAAGGCATAACTCCAATGGACT GCTACATCTGCAGATGCAGTTGGCACCATGTGCCGCCTGTACATAGGATACCTACTATGT TTACTTGCTCTTCAATAAAGGTTGTGACTTCTCATTTTACATAGCTTAACTCATTTGAAT GTTGTTGCTTCTGAGTTTAGGCTAACGGAAGTTGTCGAATTTAGGAGTATATTAAAAACT GCATCTAGTTTTAACAGTGGATCCAACTAATGTATATATCTGTAGCCTATATGTCTATAT ACATCCTTCACTGTGTGTCCTTATATCATCATGTCTTCTGCCTCACTCTAGTTTAAACTC TAAATCTACCAGCTAGTCCTTTGTTCCATTTTCCAGTGGTTGCCACCTTTAACCACTGTC TCTTGGTTTGTCAACTTTCAGATCTGAAACCAAGTATCTTTTTTTATGTAATTATTTATT TGTTCTTAATTGGAAAATAGGATGTTCAAAATTAAAGGTGTGTTTTAAAAAGAATTTGCC CCCAAGTCTCACTATCAACAGATAAGGGTGTATTCTTGTATATCCTGTATAGATATAATC ATGCATATACTCCCAAGGAGATATTTTTATATGGGTTCATTTTATCAACAGTATTCCTAT CAGCATTCCTTTCAATGCCTATATTGCATTTCCTAGTGTGAACAAACTGTGTGTAACATA GTCATTCCCTCGGTGGGATTCAAGTGCATTCTCTCAGTGCCCTCCACAGTGTTCTTAAAT GATGTTTAATGTCTTGCTTGGCTTCATTCATAGTAGCTCTTCCAGGGGTGTGCTTTGAAT TCTGACAGCCAGATGGGTGTGGCTGCCACCATACCAAGGCGCCACTCCTGTCTTGTAATG CCACCTGGAAAAGAATCCTGTCTCATTTGCTGTTTTAATTTATACATCTGATATCAAGTT GAATAAAATTTATTGGTGGAAAGCTTTCACAATTCTCATTTGCCCTTTTGACTCTTTATG TTGTCTTTGCAATATGGAGACTTTATGTTGCTAATAAACATAGTTTTAGATTTTCA
	3' upstream sequence						GCCAAGGTCGGCCAACTCCCAGGTGTGCACACCTTGTAATCCAGCCCAGGTTTTTAAGTG TACATATCTGATCTAAATGGTGTTATTCCCCTGTAATAATAGGACTTTTTTTTTCTTTTC TTTTTTTCTCTCTCTTTTTTAATATATTTTTCAAAAAAGGATGTCCAATCCCCTGGAACT GGAGTTACAGTTATAAACTGACATTTGCCTACTGGGAATTGAACCCAGGTTTTCTGGAAG AACAGCCAGTGCTCTTAACCACTGGGCCAATTGTCCAGCCCATGATAGGAATTTTTAAAA CTGAGTTCTAAGAGTTTCTGTGGCTACATACGGCTTAACGAGTGCATCTGCGTGTATCTT GTTACTTGGAAACTTTTTTTTTTTTTGGTTTTTCGAGACAGGGTTTCTCTGTAGCCCTGG CTGTCCTGGAGCTCACTCTGTAGACCAGGCTGGTCTCGAACTCAGAAGTCCACCTGCCTC TGCCTCCCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCAGCACTTAGAAACCTCT TATTGGGCCTTCACTGTATAATCCTGAGGGTCCTTACCCTCGTGCTGGGGTTTTCACTTT AAAAATCAACTACTTTTTTGATTTTTGATAATTTCCCTTTATCTTTCTTCAACCCACCCT CACCTGGAATTCTCAAGTTCATGGCCTTTGGCTTTTATTGTTGTGCATATGTTCATAAAC ATATAACCTGCTCAGTAGTGGTCCTTGTATGTATATAACTTCAGCACTGCCCACTGTAGT TGTCCTGATTGGGCCCCATGACTTTCCCCTTCTGTGTTAGCATCACCCTTGCTGAAGGTT GGTTTAGGCTTGTTTAGTGTTGAAACTTCATGGGTGTAGCTTCCCTGACATTGAGGAGAC AGAATTTCAAGCAGTCTTTCTAGTCCCCTGGCGCCTAATATCTGTGCCTCCTCTCCAGTG TTCTGCAGTGCAGGCGTTGTTGATAACATGAGCTGGGCTG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Ccnb1 (ENSMUSG00000041431)
Transcript ID	ENSMUST00000072119

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 431 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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