top page

Tutorials are available here.

Target CDS Information

Gene Symbol (Gene ID) Nuak2 (ENSMUSG00000009772)
Cross Reference
CCDS CCDS15283.1
EMBL AK004737, AK033672, AK034082, ...show all
Fantom 1200013B22, 9130215K18, 9330154N24
GO GO:0000287, GO:0004674, GO:0005524, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Nuak2-001
OTTP OTTMUSP00000024649
OTTT OTTMUST00000052118
protein_id AAH33302.1, AAH46833.1, BAB23518.1, ...show all
RefSeq_mRNA NM_028778.4
RefSeq_peptide NP_083054
UCSC uc007coo.2
UniParc UPI0000021158
Uniprot/SWISSPROT Q8BZN4
Vega_transcript Nuak2-001, OTTMUST00000052118
Vega_translation 180704, OTTMUSP00000024649
Definition protein_id:ENSMUSP00000080769
translation:
MESVALLQRPSQAPSASALASESARPLADGLIKSPKPLMKKQAVKRHHHKHNLRHRYEFL
ETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIH
EVFENSSKIVIVMEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDL
KLENILLDANGNIKIADFGLSNLYHKGKFLQTFCGSPLYASPEIVNGKPYVGPEVDSWSL
GVLLYILVHGTMPFDGQDHKTLVKQISNGAYREPPKPSDACGLIRWLLMVNPTRRATLED
VASHWWVNWGYTTGVGEQEALREGGHPSGDFGRASMADWLRRSSRPLLENGAKVCSFFKQ
HVPGGGSTVPGLERQHSLKKSRKENDMAQNLQGDPAEDTSSRPGKSSLKLPKGILKKKSS
TSSGEVQEDPQELRPVPDTPGQPVPAVSLLPRKGILKKSRQRESGYYSSPEPSESGELLD
ASDVFVSGDPVEQKSPQASGLLLHRKGILKLNGKFSRTALEGTTPSTFGSLDQLASSHPA
ARPSRPSGAVSEDSILSSESFDQLDLPERLPETPLRGCVSVDNLRGLEQPPSEGLKRWWQ
ESLGDSCFSLTDCQEVTAAYRQALGICSKLS

Chromosome 1
Length
Position(start - end)
16150
132316230 - 132332381
Orient to Chromosome plus
Link Location : (1:132316230-132332381)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Nuak2 (ENSMUSG00000009772)
Transcript ID ENSMUST00000082125
Reports
substitution
cSNPs15
Insertion13
Deletion20
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num12
non-synonymous num3
synonymous substitutions 132316415 (p.Thr62Thr), 132324967 (p.Ser86Ser), 132327758 (p.Tyr142Tyr), 132328146 (p.Arg178Arg), 132331589 (p.Thr368Thr), 132331598 (p.Gly371Gly), 132331652 (p.Gln389Gln), 132331691 (p.Arg402Arg), 132331718 (p.Pro411Pro), 132331751 (p.Ser422Ser), 132332324 (p.Cys613Cys), 132332369 (p.Ser628Ser),
non-synonymous substitutions 132331477 (p.Phe331Ser), 132331926 (p.Ala481Thr), 132332313 (p.Leu610Met),
B6 transcript
(ENSMUST00000082125)
MESVALLQRPSQAPSASALASESARPLADGLIKSPKPLMKKQAVKRHHHKHNLRHRYEFL
ETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIH
EVFENSSKIVIVMEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDL
KLENILLDANGNIKIADFGLSNLYHKGKFLQTFCGSPLYASPEIVNGKPYVGPEVDSWSL
GVLLYILVHGTMPFDGQDHKTLVKQISNGAYREPPKPSDACGLIRWLLMVNPTRRATLED
VASHWWVNWGYTTGVGEQEALREGGHPSGDFGRASMADWLRRSSRPLLENGAKVCSFFKQ
HVPGGGSTVPGLERQHSLKKSRKENDMAQNLQGDPAEDTSSRPGKSSLKLPKGILKKKSS
TSSGEVQEDPQELRPVPDTPGQPVPAVSLLPRKGILKKSRQRESGYYSSPEPSESGELLD
ASDVFVSGDPVEQKSPQASGLLLHRKGILKLNGKFSRTALEGTTPSTFGSLDQLASSHPA
ARPSRPSGAVSEDSILSSESFDQLDLPERLPETPLRGCVSVDNLRGLEQPPSEGLKRWWQ
ESLGDSCFSLTDCQEVTAAYRQALGICSKLS*
MSMv4 transcript
MESVALLQRPSQAPSASALASESARPLADGLIKSPKPLMKKQAVKRHHHKHNLRHRYEFL
ETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLLHIRREIEIMSSLNHPHIIAIH
EVFENSSKIVIVMEYASRGDLYDYISERPRLSERDARHFFRQIVSALHYCHQNGIVHRDL
KLENILLDANGNIKIADFGLSNLYHKGKFLQTFCGSPLYASPEIVNGKPYVGPEVDSWSL
GVLLYILVHGTMPFDGQDHKTLVKQISNGAYREPPKPSDACGLIRWLLMVNPTRRATLED
VASHWWVNWGYTTGVGEQEALREGGHPSGDSGRASMADWLRRSSRPLLENGAKVCSFFKQ
HVPGGGSTVPGLERQHSLKKSRKENDMAQNLQGDPAEDTSSRPGKSSLKLPKGILKKKSS
TSSGEVQEDPQELRPVPDTPGQPVPAVSLLPRKGILKKSRQRESGYYSSPEPSESGELLD
TSDVFVSGDPVEQKSPQASGLLLHRKGILKLNGKFSRTALEGTTPSTFGSLDQLASSHPA
ARPSRPSGAVSEDSILSSESFDQLDLPERLPETPLRGCVSVDNLRGLEQPPSEGLKRWWQ
ESLGDSCFSMTDCQEVTAAYRQALGICSKLS*
homology99.53 (632 / 632)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Nuak2 (ENSMUSG00000009772)
Transcript ID ENSMUST00000082125
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........GCCAAGTCCTAAAGATACAGCTAGAGATGAGGTCCTGCAGATGAGGGAGG
GATGCCTGCCCGGAATAGCTAGAATTAGGGAAGTCCTCTTGTCCTGTACTCTTTCCCTAT
AGGCCAGTATCTGAATTCCAGGCTTTCTTGCCAGCTGTGTGGCAGAAGTAAACTCACTTT
CTACATCGGAAAGGGGGGTCTGGACATAGCCTTCCAGGCCCCTCAAATGCAGCCAAATCT
TATGCCCAACCTCCTGCTCTTTTGAAAAAAAAAAAAAATCCACTGGGAGGAAACCCTGGG
ACCAAGACACTCCTTACAGATTTAGGAGCTCGTGGATGTAAGTCCTTGGAATGTGATGTG
CTTTTTTCACAATTTATGGAGATCCACAAGGCCACCACATCTTGAGGGAATCCACGCAAC
CCTACAAAGTAAGGATTTCCCAGGCCTGTTGGATTCCAGAATCCAATTAAGGTTGGTGGA
ATCCAAGCAGAGTGAACATGGAGTCAGGACAGCTCTCTACCAGTGCTTAGCTGGCGTCAG
TCTCCAACCCATTCCATCTCCCTATTCACTTTCTCCTTTATGGACCTCAAGAAGTTATCA
AAAGGCTTTTCAGGTTTTGGGCTTGGAAGAAACAATTTACTGCATGTGGAGAAATACTTC
GGGACTTTCTAGTGCCCTTAGATTGTCCCTTGCCAACCGAGAACACAGCACAATAGCACA
AGGTTGGCGTCATTCAGAGACTAAAGCAATTCAGAGAGCCTTCAATCCTAAGGACTGGCA
CTTCGGTATTAATTCGGCTCTGCTTCCTTTCTCGCATTCCTGGGCCTCGGGTCCAAGTGG
GCGGGGCCCCATTCACACCTTTCCGCGCCTAGCCAAGGGGAGGAACGGGGCAGGAGAGGG
TGAACCAATGCGAGAGGTTTTGGTCACGAGCCGCCGGCAAGTCGGCCAATGGGACGCAGG
GGCGTGGTCAGGACATTCCCCCTCGAAACGTTTTATAGCAATTCGGAATG
1 EXON 1 132316126 132316472 - 0 347
CGGGGCTTTCTAGCGTGCTCGGGTGCGGCTGTGACCTCTGAGCCCGCGGCTCTCCGCGCG
CTGCTACTGCTGCCCGACCCACTCCACCTCGCGGTCCCCGCACCATGGAGTCGGTGGCCT
TACTCCAGCGCCCGAGCCAGGCTCCCTCGGCCTCCGCCCTGGCCTCGGAGAGCGCCCGGC
CGCTGGCGGACGGGCTCATCAAGTCGCCTAAACCTCTGATGAAGAAGCAGGCGGTGAAGC
GGCACCATCACAAACACAACCTGCGGCACCGCTACGAGTTCCTGGAGACCCTGGGCAAGG
GCACCTACGGGAAGGTGAAGAAGGCACGAGAGAGCTCGGGGCGTCTG
INTRON 1 - 2 132316473 132324952 8480
GTGAGTGTCCCTCGCGGCTCCCGGC..........AATCTCCTGCATCCTCTGTTCCCAG
2 EXON 2 132324953 132325073 0 1 121
GTGGCCATCAAGTCAATCAGGAAAGACAAAATCAAAGATGAGCAGGATCTGCTGCACATA
CGGAGGGAGATTGAGATCATGTCTTCACTCAACCACCCCCACATCATTGCCATCCATGAA
G
INTRON 2 - 3 132325074 132327696 2623
GTACAGTAGTGGAACACTTGGAGCT..........TGACATTCTCACTCGCCCTCTCCAG
3 EXON 3 132327697 132327848 1 0 152
TGTTTGAGAATAGCAGCAAGATTGTGATTGTCATGGAGTATGCCAGCCGAGGCGATCTGT
ACGATTACATCAGTGAGCGGCCACGGCTGAGTGAGCGGGACGCCAGGCATTTCTTCCGAC
AGATCGTGTCTGCCCTGCACTACTGCCACCAG
INTRON 3 - 4 132327849 132328130 282
GTGAGCGCCCACCTTCCAGACCCGG..........TGACTCGGTTCCCTTCCTCTTTTAG
4 EXON 4 132328131 132328196 0 0 66
AACGGGATCGTTCACAGAGATCTCAAGCTGGAAAACATCCTTCTAGATGCCAATGGAAAC
ATCAAG
INTRON 4 - 5 132328197 132329957 1761
GTGAGCCCCTGCTTCTGGCTTCTCA..........CCATGTTTGTCCCGACCCTATATAG
5 EXON 5 132329958 132330077 0 0 120
ATTGCTGACTTTGGCCTCTCCAACCTGTACCACAAAGGCAAGTTCCTCCAGACGTTCTGT
GGGAGCCCTCTCTACGCCTCGCCTGAGATAGTCAACGGGAAGCCCTATGTGGGCCCAGAG
INTRON 5 - 6 132330078 132330558 481
GTGAGCATCCTTCTCCTGCCGGCAT..........GCACCCCTCCCCCTCTCCCTCTCAG
6 EXON 6 132330559 132330691 0 1 133
GTGGACAGCTGGTCTCTGGGCGTTCTCCTGTACATCCTGGTGCATGGCACCATGCCCTTT
GACGGGCAGGATCATAAAACACTGGTGAAGCAAATCAGTAACGGGGCTTACCGTGAGCCG
CCCAAGCCGTCCG
INTRON 6 - 7 132330692 132331320 629
GTGAGTGGGGACTGTGGCCCGGCTG..........TCAAGCCCCTGCCTTTGTTTTACAG
7 EXON 7 132331321 132333488 1 - 2168
ATGCCTGTGGCCTGATCCGGTGGCTGTTAATGGTGAACCCCACCCGTCGGGCCACACTGG
AGGATGTAGCCAGTCATTGGTGGGTCAACTGGGGTTACACCACCGGAGTCGGGGAACAGG
AAGCCCTGCGTGAGGGTGGGCACCCTAGTGGTGACTCTGGCCGGGCCTCCATGGCGGACT
GGTTACGTCGCTCCTCGCGCCCCCTCCTGGAGAATGGAGCCAAGGTGTGCAGCTTCTTCA
AGCAGCACGTGCCGGGAGGTGGAAGCACCGTACCTGGCCTGGAGCGGCAACATTCTCTTA
AGAAGTCCCGAAAGGAGAATGACATGGCTCAGAATCTGCAAGGTGACCCGGCTGAGGATA
CCTCTTCTCGTCCTGGCAAGAGCAGCCTTAAGCTTCCAAAAGGCATTCTCAAGAAAAAGT
CCTCTACCTCTTCAGGGGAGGTACAGGAGGACCCTCAGGAACTCAGACCGGTGCCTGATA
CTCCAGGGCAGCCTGTCCCTGCTGTATCCCTGCTCCCAAGGAAAGGCATCCTTAAGAAGT
CTCGACAGCGTGAATCTGGTTACTACTCCTCTCCAGAGCCCAGCGAGTCTGGGGAACTCT
TAGACACCAGTGATGTGTTTGTGAGTGGGGACCCCGTGGAGCAGAAGTCTCCACAGGCTT
CAGGGCTCCTCCTCCACCGCAAGGGCATTCTCAAACTCAATGGCAAGTTCTCCCGCACAG
CCTTAGAAGGCACTACCCCTAGCACCTTTGGCTCCCTGGACCAACTGGCCTCCTCCCATC
CTGCAGCCCGGCCCAGCCGCCCCTCAGGGGCTGTGAGTGAGGACAGCATCCTGTCCTCCG
AGTCCTTTGACCAATTGGACTTGCCTGAACGTCTTCCCGAAACCCCACTGAGGGGCTGTG
TGTCTGTGGACAACCTGAGGGGGCTTGAGCAGCCTCCCTCAGAAGGTCTGAAGCGATGGT
GGCAGGAATCCTTGGGGGATAGCTGCTTTTCTATGACAGACTGTCAAGAGGTGACTGCAG
CCTACAGACAAGCCCTAGGAATCTGCTCGAAGCTCAGCTGAGGAAGGGAGATGGTGCCCT
AGTATGGGGTAGGCTCTGAGAGGGTTTGCAGAGGAACCCTGGGTCGGATTCCTCCAGTGA
ATAGAGTACATCAAGGGCTCTACATCTGCAGCCTGACTGAACCTGAAAGATGAGAGAAAT
CGCATTGATGTGGAAAGGAATGGGAGCCCTTGCTGCCCGAGTGTTATAGTGGGGTGGCCT
GAAGGTGCCTACCTCCTTTGTGCCATGAGTGTCACCCATGACATTTCCCGCCCTGTTCTC
TGGCTGCACCTTCACATAAGTTTCTGTTTCCATCAACCACCAGGGTTAGAACCCTGACTT
CCTGGGAGGTAATGTGTAGTGACTGTCATTATTTAGAGAGGAAACAGCCTCTGGTTTCCA
TCTCTGCTGCTGTGCATCTCAAAGACCTGGGAAGACTCGGACCGCTGTTTGACTTCATCT
CAAGGGGACCAGATGCCTCTGGACCCCATCTTAGATCTCAGAGACTTGAACCTTGAAGCT
GTTCCTAGTACCCAGATGTGGATGGATGCTCTGTTTCTCAGGCCAACGGGACCTAGAATG
TGCTGACTTATTTATTTTTTTGTGATTCTCACTTCTGTTTTTTGGTTTTTGTTTGTTTGT
TTGTTTTTGTTTTTAAGTGAATTTTGCTGCTTTCAATAATGTGAATGCTGTGTTCTGGGG
AACTCCACTGTGCCACTGAAGTTTATGTACAGAGAAGTATTTGGCAATGATGTCCCTCTA
TTCAAGGGGGGTGGGGGCGTTTTTCAAATGTATGTCTTGAGCACTGTCTGGATTGAGTCT
GCAGTCCCTTCACACCCAAGGCTGGCCACCCTCCCTCATCTTCATCTGTGGCCAAAAAAA
AAAAAAAAAAAAAAAACAACCCTCATTAAAACCAGCAGTGGTAACTGGAAAAACAGTCTC
TTGTTCACTTTGGGGACTTGGGTTCACACATCTTTAAGCCTTTTGATATTTGTGACCACA
GATGGGACACAGATTCTGTTTAATGGAAATAGGGCAAGGGGGTTAGGAGGTGCAGCTGGG
TGGGTCAGGATGCTGTTTAATGTGTGCTCTCAATCCCCAGGAACGTAAAAGAATAAAATC
AATCAATC
3' upstream sequence
AAACAAACAAACAAGCACCCTTCCAAAACACTCAGTCCACCTGCCGTTCAGCCTGACCTG
TTAAGCATTCCGGAAGAAAAGCCTTGGCCCAGGGTCCTCAGTTCTTTTTTCTTTCCCTAG
TCCTCAAGGAAGAAATGGATCAGGTGGACATCTCTGATTGATTCCCTTTCCCAGCAGCCC
CTCCCTCTCCCCCCCAACCCCCCTCCTCCACTAGCCGGTGCCCTGCCCCCGGCCTGAAGA
CACTTCCCACAGCATTTATTCCCTCTGAAGAAATCCCTTTCCTTCAGTACTGGACAGCTT
CTCCCTGGGCCCTAGCTCCAGACTCTGGGAGGAAGTCAAGAATGCTTGGAATGCCCACCC
TCCCTGGCCTGCCTCTCAGCCCCCTGCAGAGCTGTCCCTGCAGCTTGTTCCATTGAGAAA
CTGCTGGACTCTGGGACTGGATAGAGGGAGGGACAGAGGACAAAGTGCAGGCAAGCAGCT
GGCCGCCTTTGGTTCCAAGCAGGCCCTCTCCCCACCCCCACTCCTGACCTACTCTGGTAT
TCACCCCCTAATTGCCTAGTTCTGGCTGGCTTCTGTTTCCCAGCTATACACCCACCTGTC
CTCCCAGTGTGGGGCATTGCCGAATGAAGACTTGGGCCTCCCTTATTATACCTAGGGACT
TAGAAAGATCACAGCCTAGAGAGGGGTTAGGACAGCACAGTTCATAAAAAAGTTGCTTGA
GTGACAGCAAATGTGCCCGAGGTCCCAGGACCGGGCTAGGCTTGCATAAACACTAGAAAA
TCACAGACTGGGCCTTCATCCCACAGCCCAGTGTGCAAGGTTGCTTGCTTGCTTCCTTCC
CTTTGGGCCTGCAGCAAGCCCTTGGTGTGCTGAACTGTGGCAGACAGCTTGGGTTGCAGA
CAGTCTGGGGGCAGGCAGCACACGGGAGCACGGAAGAATTAAACTCAGTGAAAATCATCC
AGGAAACACTGACGGGAAGTTTAGATGAAGGAAAGTTCAT..........

Sequence Detail Report

Gene Symbol (Gene ID) Nuak2 (ENSMUSG00000009772)
Transcript ID ENSMUST00000082125
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 632 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information