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Target CDS Information

Gene Symbol (Gene ID) Arfgef2 (ENSMUSG00000074582)
Cross Reference
CCDS CCDS38335.1
EMBL AL591703, AL591911, BC158012, ...show all
GO GO:0000139, GO:0000139, GO:0001881, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name Arfgef2-001
OTTP OTTMUSP00000001103
OTTT OTTMUST00000002258
protein_id AAI58013.1, CAM17723.1, CAM24646.1, ...show all
Reactome R-MMU-390466, R-MMU-390471, R-MMU-391251, ...show all
RefSeq_mRNA NM_001085495.2
RefSeq_mRNA_predicted XM_006500483.2
RefSeq_peptide NP_001078964
RefSeq_peptide_predicted XP_006500546.1
UCSC uc008nyr.2
UniParc UPI0000192A64
Uniprot/SWISSPROT A2A5R2
Vega_transcript Arfgef2-001, OTTMUST00000002258
Vega_translation 186104, OTTMUSP00000001103
Definition protein_id:ENSMUSP00000096677
translation:
MQESQTKSMFVSRALEKILADKEVKRPQHSQLRRACQVALDEIKAELEKQRLGAAAPPKA
NFIEADKYFLPFELACQSKSPRVVSTSLDCLQKLIAYGHITGNAPDSGAPGKRLIDRIVE
TICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTILQTVRTCYNIYLASKNLINQT
TAKATLTQMLNVIFTRMENQVLQEARELEKPMQSKPQSPVIQATAGSPKFSRLKQSQAQS
KPTTPEKAELPNGDHAQSGLGKVSLENGEAPRERGSPVSGRAEPSRGTDSGAQEVVKDIL
EDVVTSAVKEAAEKHGLPEPDRALGALECQECAVPPGVDENSQTNGIADDRQSLSSADNL
EPDVQGHQVAARFSHILQKDAFLVFRSLCKLSMKPLGEGPPDPKSHELRSKVVSLQLLLS
VLQNAGPVFRSHEMFVTAIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKMHLKMQ
IEVFFKEIFLNILETSTSSFEHRWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERL
VNDLSKIAQGRSGHELGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQATLGQ
ERLPDQEMGDGKGLDMARRCSVTSVESTVSSGTQTAIQDDPEQFEVIKQQKEIIEHGIEL
FNKKPKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKEVMYAYVD
QLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECNQGQTLFASADTAYVLA
YSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIEGKKIAMKETK
EHTIATKSTKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPM
FKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAVRIACIFGMQLERDAYVQALARFSL
LTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKTRY
LSGSGREREGSLKGHSLAGEEFMGLGLGNLVSGGVDKRQMASFQESVGETSSQSVVVAVD
RIFTGSTRLDGNAIVDFVRWLCAVSMDELASPHHPRMFSLQKIVEISYYNMNRIRLQWSR
IWHVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKK
NRSPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVS
TIFQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTS
DDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQD
LFRIVFRIFDNMKLPEQQSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQ
WCVKQDNEQLARSGTNCLENLVISNGEKFSPAVWDETCNCMLDIFKTTIPHVLLTWRPAG
MEEEVSDRHLDVDLDRQSLSSIDRNASERGQSQLSNPTDDSWKGAPYAHQKLLASLLIKC
VVQLELIQTIDNIVFYPATSKKEDAEHMVAAQQDTLDAEIHIETENQGMYKFMSSQHLFK
LLDCLQESHSFSKAFNSNYEQRTVLWRAGFKGKSKPNLLKQETSSLACCLRILFRMYVDE
NRRDSWDEIQQRLLRVCSEALAYFITVNSESHREAWTSLLLLLLTKTLKISDEKFKAHAS
MYYPYLCEIMQFDLIPELRAVLRKFFLRIGLVYKIWIPEEPSQVPAALSSTW

Chromosome 2
Length
Position(start - end)
89072
166805715 - 166894788
Orient to Chromosome plus
Link Location : (2:166805715-166894788)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Arfgef2 (ENSMUSG00000074582)
Transcript ID ENSMUST00000099078
Reports
substitution
cSNPs18
Insertion59
Deletion60
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num15
non-synonymous num3
synonymous substitutions 166835627 (p.Ala146Ala), 166835633 (p.Thr148Thr), 166836324 (p.Pro242Pro), 166836333 (p.Pro245Pro), 166851112 (p.Pro427Pro), 166851217 (p.Ser462Ser), 166853325 (p.Arg539Arg), 166859287 (p.Gly668Gly), 166860683 (p.Lys847Lys), 166863589 (p.Ser913Ser), 166867401 (p.Arg1133Arg), 166868894 (p.Val1152Val), 166871568 (p.Glu1296Glu), 166873872 (p.Thr1360Thr), 166878302 (p.Asn1456Asn),
non-synonymous substitutions 166836392 (p.Leu265Ser), 166856517 (p.Ala636Thr), 166860669 (p.Thr843Ser),
B6 transcript
(ENSMUST00000099078)
MQESQTKSMFVSRALEKILADKEVKRPQHSQLRRACQVALDEIKAELEKQRLGAAAPPKA
NFIEADKYFLPFELACQSKSPRVVSTSLDCLQKLIAYGHITGNAPDSGAPGKRLIDRIVE
TICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTILQTVRTCYNIYLASKNLINQT
TAKATLTQMLNVIFTRMENQVLQEARELEKPMQSKPQSPVIQATAGSPKFSRLKQSQAQS
KPTTPEKAELPNGDHAQSGLGKVSLENGEAPRERGSPVSGRAEPSRGTDSGAQEVVKDIL
EDVVTSAVKEAAEKHGLPEPDRALGALECQECAVPPGVDENSQTNGIADDRQSLSSADNL
EPDVQGHQVAARFSHILQKDAFLVFRSLCKLSMKPLGEGPPDPKSHELRSKVVSLQLLLS
VLQNAGPVFRSHEMFVTAIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKMHLKMQ
IEVFFKEIFLNILETSTSSFEHRWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERL
VNDLSKIAQGRSGHELGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQATLGQ
ERLPDQEMGDGKGLDMARRCSVTSVESTVSSGTQTAIQDDPEQFEVIKQQKEIIEHGIEL
FNKKPKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKEVMYAYVD
QLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECNQGQTLFASADTAYVLA
YSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIEGKKIAMKETK
EHTIATKSTKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPM
FKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAVRIACIFGMQLERDAYVQALARFSL
LTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKTRY
LSGSGREREGSLKGHSLAGEEFMGLGLGNLVSGGVDKRQMASFQESVGETSSQSVVVAVD
RIFTGSTRLDGNAIVDFVRWLCAVSMDELASPHHPRMFSLQKIVEISYYNMNRIRLQWSR
IWHVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKK
NRSPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVS
TIFQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTS
DDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQD
LFRIVFRIFDNMKLPEQQSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQ
WCVKQDNEQLARSGTNCLENLVISNGEKFSPAVWDETCNCMLDIFKTTIPHVLLTWRPAG
MEEEVSDRHLDVDLDRQSLSSIDRNASERGQSQLSNPTDDSWKGAPYAHQKLLASLLIKC
VVQLELIQTIDNIVFYPATSKKEDAEHMVAAQQDTLDAEIHIETENQGMYKFMSSQHLFK
LLDCLQESHSFSKAFNSNYEQRTVLWRAGFKGKSKPNLLKQETSSLACCLRILFRMYVDE
NRRDSWDEIQQRLLRVCSEALAYFITVNSESHREAWTSLLLLLLTKTLKISDEKFKAHAS
MYYPYLCEIMQFDLIPELRAVLRKFFLRIGLVYKIWIPEEPSQVPAALSSTW*
MSMv4 transcript
MQESQTKSMFVSRALEKILADKEVKRPQHSQLRRACQVALDEIKAELEKQRLGAAAPPKA
NFIEADKYFLPFELACQSKSPRVVSTSLDCLQKLIAYGHITGNAPDSGAPGKRLIDRIVE
TICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTILQTVRTCYNIYLASKNLINQT
TAKATLTQMLNVIFTRMENQVLQEARELEKPMQSKPQSPVIQATAGSPKFSRLKQSQAQS
KPTTPEKAELPNGDHAQSGLGKVSSENGEAPRERGSPVSGRAEPSRGTDSGAQEVVKDIL
EDVVTSAVKEAAEKHGLPEPDRALGALECQECAVPPGVDENSQTNGIADDRQSLSSADNL
EPDVQGHQVAARFSHILQKDAFLVFRSLCKLSMKPLGEGPPDPKSHELRSKVVSLQLLLS
VLQNAGPVFRSHEMFVTAIKQYLCVALSKNGVSSVPDVFELSLAIFLTLLSNFKMHLKMQ
IEVFFKEIFLNILETSTSSFEHRWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERL
VNDLSKIAQGRSGHELGMTPLQELSLRKKGLECLVSILKCMVEWSKDLYVNPNHQATLGQ
ERLPDQEMGDGKGLDMARRCSVTSVESTVSSGTQTTIQDDPEQFEVIKQQKEIIEHGIEL
FNKKPKRGIQFLQEQGMLGAAVEDIAQFLHQEERLDSTQVGEFLGDSTRFNKEVMYAYVD
QLDFCEKEFVSALRTFLEGFRLPGEAQKIDRLMEKFAARYIECNQGQTLFASADTAYVLA
YSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIEGKKIAMKETK
EHSIATKSTKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHAKAPFTSATHLDHVRPM
FKLVWTPLLAAYSIGLQNCDDTEVASLCLEGIRCAVRIACIFGMQLERDAYVQALARFSL
LTASSSITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKTRY
LSGSGREREGSLKGHSLAGEEFMGLGLGNLVSGGVDKRQMASFQESVGETSSQSVVVAVD
RIFTGSTRLDGNAIVDFVRWLCAVSMDELASPHHPRMFSLQKIVEISYYNMNRIRLQWSR
IWHVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKK
NRSPTIRDMVIRCIAQMVSSQAANIRSGWKNIFAVFHQAASDHDGNIVELAFQTTGHIVS
TIFQHHFPAAIDSFQDAVKCLSEFACNAAFPDTSMEAIRLIRFCGKYVSERPRVLQEYTS
DDMNVAPGDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEIMKSYGHTFAKHWWQD
LFRIVFRIFDNMKLPEQQSEKSEWMTTTCNHALYAICDVFTQFYEALHEVLLSDVFAQLQ
WCVKQDNEQLARSGTNCLENLVISNGEKFSPAVWDETCNCMLDIFKTTIPHVLLTWRPAG
MEEEVSDRHLDVDLDRQSLSSIDRNASERGQSQLSNPTDDSWKGAPYAHQKLLASLLIKC
VVQLELIQTIDNIVFYPATSKKEDAEHMVAAQQDTLDAEIHIETENQGMYKFMSSQHLFK
LLDCLQESHSFSKAFNSNYEQRTVLWRAGFKGKSKPNLLKQETSSLACCLRILFRMYVDE
NRRDSWDEIQQRLLRVCSEALAYFITVNSESHREAWTSLLLLLLTKTLKISDEKFKAHAS
MYYPYLCEIMQFDLIPELRAVLRKFFLRIGLVYKIWIPEEPSQVPAALSSTW*
homology99.83 (1793 / 1793)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Arfgef2 (ENSMUSG00000074582)
Transcript ID ENSMUST00000099078
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AAACTGGCCCGCCAGGAGCTCTCTCTCCTGTGGCAGCAGGACTGTGTCCA
GGGCTGGTGTGGTTTGCTGTCAGAGATACAAATCTAGAAGAGATAGACACCGTGAATATA
CCTTCCAGCCTACCCTTCTTTCCCCTCCCCTCCTCTCTCTTCTCTCTTCCCTTCTGGCTT
CATCCTCAGTCCTGGTTCTTAACTTCCCTGAGCCTCCTTTCCATCCCTGATTTCTCTGCC
CTTCCTGGATCCGGCATCTGACCTTCCCTACTCTCTGTCACCTCTCTCATTCCATTCACT
TCCTTTTGCCCATCTCTCTTCTCTCGACTATTATTACTCTCACTAATTCTTTTTTTTAAA
GATTTATTTATTTATTTATTTATTTATTTATTTATTATGTGTACACTGTAGCTGTCTTCA
GACACTCCAGAAGAAGGCATCAGATTTCATTACGGGTGGTTGTGAGCCACCATGTGGTTG
CTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGTGCTCTTAAACACTGAGCTATC
TCACCAGCCCTCACTAATTCTTTTTACGATTTTTTTCTTTCCCCTTTACTCCCTCTTTCG
CTTTTCTCAGCATATCTAGCGCATGCTCTTAGTCTCTTCCTACCTCCGATCACTTGCATC
TTTCCTTCAGGGCTGCCCATGTCTATAGGCTTTGACCTGCATTTTCTTCCCCTTCATAGT
CATTGACCATCACTCCCCTACCTGGCCCGGTTATACTACTTAGACACGCCCGGACCAGCA
CCACTCGCGTAGGCCCCGCCCCAACCGAACAGACCACGCCCCACCACAGGTCTACTGCCC
CGCCCACCCGCCCCACCCACAGAACTCCACCCCACTCTGGCTCCGCCTCCCGGCCGGCCC
CCCACCCTTGGGGTCACAGGGTCGACCGACGCTCAGCAGACGCAGCGACACCGCCAGTCA
CGTGGTCACGTGACGCGCTGCAACATGGCGGCGCCGTGGGGCTGGGGCGT
1 EXON 1 166805588 166805835 - 1 248
CTCTTCCTGACAGGGCGGCGCGCACGGACGCGGCCGGTGCCGGCCGGGTCGCCGGGCCCT
CAGCCTCGCTCTCCTGCTCGCTCGCACCGCCGGCTCGCGGGGTCGCCGGCCCCCGCAGGC
CGGGGCCATGCAGGAAAGCCAGACCAAGAGCATGTTCGTGTCCCGGGCCCTGGAGAAGAT
CCTAGCTGACAAGGAGGTGAAGCGGCCCCAGCACTCCCAGCTGCGTAGGGCCTGCCAGGT
GGCGCTCG
INTRON 1 - 2 166805836 166826926 21091
GTGAGTGAGCCACCCCGGCCTGGCC..........AATGTGCTTTTTCTTCTTCCACCAG
2 EXON 2 166826927 166826957 1 2 31
ATGAAATTAAAGCAGAACTAGAAAAGCAGAG
INTRON 2 - 3 166826958 166827541 584
GTAAGCAGCTGTGCTTCCTCCTTTT..........CTTTCCTCTTTCCTGCTTTCCCTAG
3 EXON 3 166827542 166827665 2 0 124
GCTTGGCGCTGCGGCTCCACCAAAGGCAAACTTCATTGAAGCTGACAAGTATTTCCTTCC
ATTCGAGCTGGCCTGCCAATCCAAGTCACCTCGGGTGGTCAGCACATCCCTGGACTGCTT
GCAG
INTRON 3 - 4 166827666 166834470 6805
GTACCACGTTTAAGCTCAGTGTGAG..........GTAACTTCTGCTCTTTTGTGTGCAG
4 EXON 4 166834471 166834617 0 0 147
AAACTCATCGCATATGGACACATCACTGGCAATGCCCCTGACAGTGGCGCTCCTGGGAAG
CGGCTGATCGACAGGATCGTTGAAACCATTTGCAATTGTTTTCAGGGCCCTCAGACAGAT
GAAGGGGTTCAGCTACAAATCATTAAG
INTRON 4 - 5 166834618 166835612 995
GTACTTCTGTGTGCCTGGTCTGGGT..........GGTGGCCATTTCTGATCTGTGCCAG
5 EXON 5 166835613 166835792 0 0 180
GCTCTGCTGACTGCCGTGACCTCCCCACACATTGAAATCCATGAGGGCACCATCCTGCAG
ACAGTGAGGACCTGCTACAATATCTATCTGGCCAGCAAAAACCTCATCAATCAAACCACC
GCCAAGGCCACCCTTACCCAAATGCTGAATGTCATCTTCACCCGCATGGAAAACCAAGTG
INTRON 5 - 6 166835793 166836201 409
GTGAGTGACAGCTGGCCTGGCCCCA..........GAATCCCTTCTCTCTTGTGTTTTAG
6 EXON 6 166836202 166836457 0 1 256
TTACAGGAGGCCAGAGAATTGGAAAAACCAATGCAGTCAAAACCTCAGTCCCCGGTGATC
CAGGCCACAGCAGGCTCTCCCAAGTTCAGCCGCCTGAAGCAGAGCCAGGCCCAGAGCAAA
CCGACGACTCCCGAGAAAGCAGAGCTGCCCAATGGGGACCATGCCCAGAGTGGCCTAGGA
AAAGTGAGCTCGGAAAATGGAGAAGCTCCCCGAGAGAGAGGCTCGCCAGTCTCTGGGAGA
GCCGAGCCTTCGAGGG
INTRON 6 - 7 166836458 166842684 6227
GTGAGCTGGCATCCTCCTGGGCTGT..........GTTTGTGTGTTTGGGCTGTGTGCAG
7 EXON 7 166842685 166842753 1 1 69
GCACTGACAGTGGAGCTCAGGAGGTGGTGAAGGACATCTTAGAGGACGTGGTCACGTCTG
CTGTGAAAG
INTRON 7 - 8 166842754 166845449 2696
GTGAGTGCTGAGGCCAGCCCGCCTT..........AATGACTTTGAACTTATGTCTTAAG
8 EXON 8 166845450 166845601 1 0 152
AAGCAGCAGAAAAGCATGGTCTGCCGGAGCCCGACCGAGCCCTGGGTGCCCTAGAGTGCC
AGGAATGCGCTGTTCCTCCTGGAGTTGATGAAAACTCACAGACCAACGGCATAGCAGACG
ACAGGCAGTCGCTATCCTCCGCAGATAATCTG
INTRON 8 - 9 166845602 166848866 3265
GTACGTCACTATGCTCTCCCTTCCA..........ATTTCCCCTTTGTTTCTAATCTTAG
9 EXON 9 166848867 166848997 0 2 131
GAACCAGATGTTCAAGGACACCAAGTGGCTGCTAGGTTCTCTCACATTCTACAGAAGGAT
GCCTTCCTGGTGTTCCGCTCCCTGTGCAAGCTGTCCATGAAGCCCCTTGGGGAAGGGCCA
CCAGATCCAAA
INTRON 9 - 10 166848998 166851042 2045
GTAAGCTCTCAACAGCTGTGGCCGT..........CCACTGCCTCTCGTTCTCTCTGCAG
10 EXON 10 166851043 166851277 2 0 235
GTCCCACGAGCTTCGTTCCAAGGTGGTTTCCCTGCAGCTGCTCCTCTCTGTGCTGCAGAA
TGCTGGCCCGGTCTTCAGGAGCCACGAGATGTTCGTCACTGCCATTAAGCAGTACCTGTG
TGTGGCCCTTTCCAAGAATGGCGTGTCCTCAGTGCCTGACGTCTTCGAACTCTCACTTGC
TATTTTTCTTACTCTTCTTTCAAACTTCAAGATGCACTTGAAAATGCAGATAGAG
INTRON 10 - 11 166851278 166851954 677
GTAATACTTCAGCTAGTGTTTTTAT..........CTTCCCCTGTCTTCGTGCTGCACAG
11 EXON 11 166851955 166852054 0 1 100
GTCTTTTTCAAAGAGATTTTCCTGAACATTTTAGAAACATCCACAAGTTCTTTTGAGCAC
CGCTGGATGGTCATTCAGACCCTGACGAGGATTTGTGCAG
INTRON 11 - 12 166852055 166853254 1200
GTATGCTCCCCTGGGACACTCAGGA..........TCTAATATGTGTGTTACTTTCCCAG
12 EXON 12 166853255 166853394 1 0 140
ATGCCCAGTGCGTTGTGGATATTTATGTCAACTACGACTGTGACTTAAATGCTGCTAACA
TTTTCGAGCGTCTAGTAAATGACTTATCCAAAATTGCTCAGGGAAGAAGTGGACATGAGC
TGGGGATGACACCTCTACAG
INTRON 12 - 13 166853395 166854904 1510
GTAAGACCACTGAAGTGCATGGTTG..........TGTGCTTTTCACTGTGGACCTCTAG
13 EXON 13 166854905 166855013 0 1 109
GAGCTCAGTCTGAGGAAGAAAGGCCTGGAGTGTCTGGTGTCTATTCTCAAGTGCATGGTG
GAGTGGAGCAAGGACCTGTATGTGAATCCCAACCACCAGGCTACCCTGG
INTRON 13 - 14 166855014 166856406 1393
GTGAGTGAGCTGTGCCAAGCAGCTG..........TCTGTTTGCTTTTATGTCACTGCAG
14 EXON 14 166856407 166856590 1 2 184
GTCAGGAGAGGCTCCCAGATCAGGAAATGGGGGACGGAAAAGGCCTTGACATGGCAAGAC
GGTGCAGCGTGACATCCGTGGAGTCCACAGTGTCCTCGGGGACCCAGACAACCATTCAGG
ATGACCCAGAGCAGTTTGAGGTCATCAAACAACAGAAGGAAATCATTGAGCATGGCATTG
AGCT
INTRON 14 - 15 166856591 166859262 2672
GTGAGTGGGGCTGCTGTGCCAGGCC..........TGTGTTCTGTCTCCTATTGTTATAG
15 EXON 15 166859263 166859374 2 0 112
CTTCAATAAGAAGCCCAAGCGAGGAATCCAGTTTCTCCAAGAGCAAGGCATGCTGGGAGC
AGCTGTAGAAGATATTGCCCAATTTCTGCACCAGGAGGAGCGGCTGGATTCT
INTRON 15 - 16 166859375 166859785 411
GTAAGTCAGGGTGTGGTATGGCATG..........ATGTGAGTGTGCATTCGTGTTTCAG
16 EXON 16 166859786 166859991 0 2 206
ACCCAGGTTGGCGAGTTTCTGGGAGACAGCACGAGGTTTAACAAGGAGGTGATGTATGCC
TATGTGGACCAACTGGATTTCTGTGAAAAAGAGTTCGTCTCAGCCCTGAGGACATTCCTG
GAGGGCTTCCGCCTGCCTGGGGAAGCCCAGAAGATTGACCGGTTAATGGAGAAGTTTGCT
GCACGATACATAGAATGTAACCAAGG
INTRON 16 - 17 166859992 166860313 322
GTGAGCACTGTGGTGCAGCTGCTTC..........TCTTACCTGGGTTCTTCCCTTCCAG
17 EXON 17 166860314 166860398 2 0 85
GCAAACCCTGTTTGCTAGTGCGGACACTGCGTATGTCCTGGCGTACTCCATCATCATGCT
GACCACAGACCTGCACAGCCCACAG
INTRON 17 - 18 166860399 166860524 126
GTAAAATGCCCCATGGTTTGTATAG..........TTTTTCTTTCTTTTTTCAATTTCAG
18 EXON 18 166860525 166860696 0 1 172
GTAAAGAATAAGATGACAAAAGAGCAGTATATTAAAATGAACCGGGGCATCAACGACAGC
AAAGACCTGCCTGAGGAGTACCTGTCCAGCATCTATGACGAGATAGAGGGCAAGAAGATA
GCGATGAAGGAGACAAAGGAGCACTCAATTGCGACCAAATCCACCAAGCAGA
INTRON 18 - 19 166860697 166861583 887
GTAAGGCCTGCCTGCCTGCCTGCCT..........GTGTATGTGTCTTGTTTCCTTCCAG
19 EXON 19 166861584 166861735 1 0 152
GTGTAGCTAGTGAAAAGCAGAGGCGGCTGCTGTACAATGTGGAGATGGAGCAGATGGCTA
AAACAGCCAAAGCTCTGATGGAGGCCGTGAGCCATGCCAAAGCCCCGTTTACCAGCGCCA
CACACTTGGACCATGTCCGGCCAATGTTCAAA
INTRON 19 - 20 166861736 166863556 1821
GTGAGTGTCCTAGGGAATTAGCATA..........GTTACTGAAACTTGCTTCCTTGCAG
20 EXON 20 166863557 166863685 0 0 129
CTGGTGTGGACGCCGCTGCTGGCAGCCTATAGCATTGGCCTGCAGAACTGTGATGACACG
GAGGTGGCCTCCCTGTGTTTGGAAGGCATCAGGTGTGCAGTCCGCATTGCCTGCATCTTT
GGAATGCAG
INTRON 20 - 21 166863686 166864692 1007
GTAGGTAGAAGTCAACGCATGTATC..........AGCGCTCCTTGGGCTTCTCTTTCAG
21 EXON 21 166864693 166864851 0 0 159
CTGGAACGAGATGCCTATGTTCAGGCCCTTGCTCGCTTTTCCCTGCTGACAGCCAGCTCC
AGCATCACAGAAATGAAGCAGAAAAACATCGACACCATAAAGACACTCATCACTGTGGCT
CACACCGATGGCAACTACCTTGGCAACTCCTGGCATGAG
INTRON 21 - 22 166864852 166865679 828
GTATGTGTCTCTGCCTTTTCTCAAG..........ACGTCTCACACCTTCTCTTTCGTAG
22 EXON 22 166865680 166865827 0 1 148
ATCTTGAAGTGCATCAGCCAGCTGGAGCTTGCTCAGCTGATAGGAACTGGGGTGAAGACT
CGCTACCTCTCTGGCTCTGGGCGGGAACGAGAAGGGAGCCTGAAGGGCCACAGTCTGGCA
GGAGAAGAATTCATGGGTCTTGGCCTCG
INTRON 22 - 23 166865828 166866911 1084
GTAAGATACCAGCCCCAGCTGGCCA..........ACTGATTCTGTGTGTTATGTTTTAG
23 EXON 23 166866912 166867011 1 2 100
GTAACTTGGTGAGTGGTGGTGTAGACAAAAGACAGATGGCCAGCTTCCAGGAGTCGGTTG
GTGAAACAAGCTCACAGAGTGTGGTTGTCGCAGTTGACAG
INTRON 23 - 24 166867012 166867145 134
GTGATGACTGTGTTCTGCAGTGATG..........GAGAAATTTCAATTTTCCCCCCTAG
24 EXON 24 166867146 166867186 2 1 41
AATTTTTACTGGCTCTACCAGACTGGATGGAAATGCAATAG
INTRON 24 - 25 166867187 166867287 101
GTATGTATCTTGACTTTTGTGCCAG..........ATGTGTTCCTGTCTCTCTCCTGTAG
25 EXON 25 166867288 166867457 1 0 170
TTGACTTTGTCCGTTGGCTGTGTGCTGTGTCCATGGATGAGCTGGCTTCTCCCCACCATC
CTCGAATGTTCAGCCTGCAGAAGATTGTGGAAATATCATACTACAACATGAACCGGATCC
GGCTGCAGTGGTCTCGGATATGGCATGTCATTGGAGATCACTTCAATAAG
INTRON 25 - 26 166867458 166868891 1434
GTGACTGCCAGCATCTAAAGACCAC..........AGCCTGCTGCTTCCTGTCCCTCCAG
26 EXON 26 166868892 166869043 0 2 152
GTGGGCTGTAACCCCAATGAAGATGTGGCCATCTTCGCAGTTGACTCTCTGCGGCAGCTC
TCCATGAAGTTCCTGGAGAAGGGAGAATTAGCCAACTTCCGATTTCAGAAGGATTTTCTG
AGGCCATTTGAACATATTATGAAGAAAAACAG
INTRON 26 - 27 166869044 166870209 1166
GTAGTGCATTTCATTGTGAAGGCCC..........TCTTCCCCCTCCCACCTCTTGCCAG
27 EXON 27 166870210 166870382 2 1 173
GTCCCCGACCATCCGGGACATGGTGATCCGATGCATCGCTCAGATGGTGAGCTCCCAGGC
AGCCAACATCCGCTCAGGCTGGAAGAACATCTTTGCTGTGTTCCACCAGGCTGCCTCTGA
CCACGATGGGAACATTGTGGAGCTGGCCTTCCAAACCACAGGCCACATCGTCT
INTRON 27 - 28 166870383 166871458 1076
GTAAGTGTCTCTGTCCCCTCCTGTG..........ATCTTGCTGCCTCTTGTCTCCCCAG
28 EXON 28 166871459 166871619 1 0 161
CAACCATCTTCCAGCACCACTTCCCTGCAGCCATCGACTCCTTCCAGGATGCTGTGAAGT
GCTTGTCTGAGTTCGCCTGCAATGCAGCTTTCCCTGACACCAGCATGGAAGCCATCCGGC
TCATCCGCTTCTGTGGGAAATACGTCTCAGAGAGGCCTCGG
INTRON 28 - 29 166871620 166873575 1956
GTGTGTCTCCCAGCCTTGCTTCTGT..........ATCTGAGACATGATTTTCATTTCAG
29 EXON 29 166873576 166873706 0 2 131
GTGCTGCAAGAGTACACAAGTGATGATATGAATGTGGCTCCTGGTGACAGGGTCTGGGTC
AGAGGCTGGTTTCCCATCCTGTTTGAACTCTCCTGCATCATTAACAGATGCAAGTTAGAT
GTACGCACAAG
INTRON 29 - 30 166873707 166873862 156
GTAACTGGATCCCCAAGGCAGCTGG..........CTACTCTCCTTTATTTTTCCCCCAG
30 EXON 30 166873863 166873992 2 0 130
GGGACTCACAGTCATGTTTGAGATTATGAAGAGCTATGGCCACACCTTTGCAAAGCACTG
GTGGCAGGACCTGTTCAGAATCGTGTTTCGAATTTTTGACAACATGAAACTCCCTGAGCA
ACAGTCAGAG
INTRON 30 - 31 166873993 166876492 2500
GTGGGTGATGTCTACAGTGTGGCCT..........GAAGATTCATTTTTTTTCCTTTCAG
31 EXON 31 166876493 166876628 0 1 136
AAATCAGAGTGGATGACGACCACGTGCAATCATGCACTGTACGCTATTTGTGACGTATTC
ACCCAGTTCTACGAAGCTTTGCATGAAGTGCTTCTCTCTGATGTGTTTGCGCAGCTGCAG
TGGTGCGTGAAACAAG
INTRON 31 - 32 166876629 166878270 1642
GTATTCATTAAGTGAGGGAGGGGCA..........CAACAGATGCTGTTGAATTTTGCAG
32 EXON 32 166878271 166878409 1 2 139
ATAATGAGCAGTTGGCCCGATCAGGTACGAATTGCTTAGAGAACCTAGTGATATCCAACG
GCGAGAAGTTCAGCCCTGCTGTCTGGGATGAAACCTGCAATTGCATGTTGGATATTTTCA
AAACCACCATCCCACATGT
INTRON 32 - 33 166878410 166878517 108
GTAAGTGCTAAGGCATGTGGGATGT..........CTGCTTTCTCTCTTGCTCCCTTAAG
33 EXON 33 166878518 166878572 2 0 55
TTTGCTGACGTGGAGACCTGCGGGGATGGAGGAGGAGGTGTCAGATAGACATCTG
INTRON 33 - 34 166878573 166881171 2599
GTAGGTTCGTTTATTCTCTTCTCAT..........GTCATTCTTTTCTGGTTTGCATTAG
34 EXON 34 166881172 166881286 0 1 115
GATGTGGACCTAGACCGCCAGTCTTTAAGCAGCATAGACAGAAACGCCTCCGAGAGAGGA
CAGAGCCAGCTGTCCAACCCCACTGACGACAGCTGGAAGGGGGCACCGTATGCAC
INTRON 34 - 35 166881287 166885778 4492
GTAAGACCTTTTATTCTGGGTGTGT..........GGTTAATCTTTGTCATCTGCTACAG
35 EXON 35 166885779 166885909 1 0 131
ATCAGAAACTGCTGGCCAGCCTCCTCATCAAGTGTGTGGTTCAGCTGGAGCTGATCCAGA
CCATTGACAACATCGTGTTCTACCCTGCCACCAGCAAGAAGGAGGATGCGGAGCACATGG
TTGCTGCCCAG
INTRON 35 - 36 166885910 166890268 4359
GTAAACACCCAGGGTCTGGGCTGCA..........TCACCATCTTGTCTCTCCTCTCCAG
36 EXON 36 166890269 166890437 0 1 169
CAAGACACCCTCGATGCAGAGATCCACATCGAGACGGAGAATCAGGGCATGTACAAGTTC
ATGTCCTCCCAGCACCTCTTCAAGCTGCTGGACTGCCTGCAGGAGTCCCACTCCTTCTCC
AAAGCCTTCAACTCCAACTATGAGCAGCGGACTGTCCTCTGGCGAGCTG
INTRON 36 - 37 166890438 166891766 1329
GTGAGGCACACAGGCTCATGACAGG..........GCTGACTCTATTGCCTTATCTCTAG
37 EXON 37 166891767 166891905 1 2 139
GCTTCAAGGGCAAGTCCAAACCCAATCTTCTCAAACAAGAAACCAGCAGCCTGGCCTGTT
GTCTAAGGATCCTGTTTAGAATGTACGTTGATGAGAACCGCAGGGATTCCTGGGACGAAA
TACAGCAGCGACTTCTAAG
INTRON 37 - 38 166891906 166893500 1595
GTAAGATTGTTTTCCGTTGTTATTT..........TGACATGCCTGTCTCTTACCTCTAG
38 EXON 38 166893501 166893618 2 0 118
AGTGTGCAGTGAAGCACTTGCCTATTTCATTACTGTGAACTCCGAGAGCCATCGGGAAGC
ATGGACGAGCCTCCTGCTGCTACTTCTAACCAAAACCCTCAAGATAAGCGATGAAAAG
INTRON 38 - 39 166893619 166894611 993
GTACAGAGTGAACTCCTCTTCCCCG..........TTGGCTCTCTGCTTCCTCCTGCAAG
39 EXON 39 166894612 166898052 0 - 3441
TTCAAAGCACACGCGTCAATGTACTACCCCTACCTGTGTGAAATTATGCAGTTTGACCTG
ATCCCTGAGCTCCGAGCAGTTCTGCGAAAGTTCTTCCTGCGGATAGGCCTGGTGTATAAG
ATATGGATTCCAGAAGAGCCGTCGCAAGTGCCAGCAGCACTGTCATCGACCTGGTAGCAC
TGGCTGCATGGCCACTGCTGTGGTTCTGTAGAACATCCGCCATGCCGTCCCAGCTGGCGG
AGGAGGAGCTGCCCACCTAGCTGGGTTTGGACCTGGAGTGCAGTGGCGTGAACCCTGGTC
AGCACAGTCCCCAGCAGAGGCTCATGGTGTCTCATTGAACCATCACATACCAGTAACTCG
GTGGGCAGGGAGTCTGTTCCCCCGTCCTTGCATTCCGCTGGCTGACCTGTTAGACCTGTC
CTTGTGAATGCCACCGTTTCCTCTAAGACTGGCCATAAATGTTTCGTCGGCGGAAGTCGC
TCTCCTGGGAGGCAATGAGCATTGCCGTATAGGTTCCTGTTTATTAGAGAGTATGCTAAT
AAAAGTCCTTGTAATAGCTCACAGCCACCTAAGTGCGCGGTGTTTTGTTGTTTGACTGTG
TTAGAGAAGTTTGAATGTTTGTGTCAGTTTTGGGTCAGCCTAGATAAAGATGGGAAAGAG
GGAGTGTTCCTTATGTCTTGTTTTGTAATTGTTTGAGTGGTTTCTAAAATATTTTACAAA
GATATATTATTAAAATTTTGATTAAAGGCAGAGTTTAGTAGACTTAAGAGCTTGCAAGGT
TTTAAGAAAATGTAGTGCCTCGTGGCTCCCTGGTTTAGTAACTTGGAGAGACAGTCTGTA
GGAAAAAGATAATCTAAAAAAAGGTGTTAGCCTTCCTTGAAGTATTTGTGGGTGGATGTT
CCGTTAAATTTTCCAGAATGCATTGCACATCTTTTTATGAAATCTAGACTATGAAAAGGT
GATAAACATGAAGTAACTGACCCAGAGTTGGTTTATCTTTGAGTAAACCTTTTTAGTTTT
TACCTCAGCAGAGTGTTAGTATGGCTGCTTTGCAGTCCCTGCTAAAGGGACCACCAGAGG
GAGGGACAGTTCGTACGGCCCTCTCAGCACCCGTCATGAGTGGGACTGGAGCCCCTGCGG
GACTAGCACAGCTGGGCTGTGACAGTGGCAGAGGTGGCACCCAGAGCTTCTGTTAACTTG
AGCCGGGAGCTGGGTTCTTTAGCAAGATGAGCTTCTGGGGTCCTTAAGTTGGTAATGGTG
CCATGTCCAGACCCACAGCAGAGTGAAGTCTGAGTGCTCCTAACAACCCACAGCAGCCAC
GCTAGAAGCTTAATGGATTCGGAGCCCATGAGAGAAAGAACACAGGCTTCCTGGTCTGCC
CTCCCCCTCCGCTCACCAGGAGCTAAACTGAGAGGCTAAACTGTGTCATGAAGCGCATTG
GAAACAGACTTCTGCCTACATCGAGTCCTACGAATTGGGGTTGTATTGATGTCACTCTGG
TGCCTTAGAAGTCAGTCGTCCTTGGGAAGGTGTCTGCGAGACTGGGCCCTTTCTTCTCTC
CAGAGCAGGATGCCTGGTGCTTTTGCTATTCTCTCTCTCGTTTCTGACAGCCTTGGCACA
TGCTCGGTTTGGCCAGTAGAACTTGTATTTATGCTTTTTTTTTCCCCAAAAGTATTTTAA
TTTCTCTACCAAAGGGGGAAAAGAAAGCAGGCTGAGGTTATTATTGCTAACACACCTCAG
CCGAGCAGGCTATGTACCTCGAAGGGAGGGCCTGGGGGACAATGTTACCGAAAGGAGAAT
GTGAGCACATTTGACTGACACGGCCTGGAACCCGGTGCATCTTTTCACGGCACTGCCGAG
ACGTACTCCCTGGTGTTGCCGCTCACAGGCCCTCAGCTGTCGGTGGTTCCTGCAGCTTTT
GTTCCTCGCATGTAATCAGGGAGCACGCATGCACGTTGAGTGGGTGCATCCTGGCTAAGC
TGTGTCCCTGAGTGGTGGCTTTCCCTCCTGTCACGTGACATCCCATTCACTCATCTACAC
TAGCCCAGTGCTCCCGTTGTCCCCTGCCTCCTCTGTAATTTTTGCCCCTTCCAGGGTACG
GAATGTGTCAGTGCATTTTCTCCTTACTGAGAGTCTCAGCTCCAATCTCTTCATAATTTT
GTTCTGTAAAAGATGAACCTTTCCGAGTGATGCATTCAAACTGTCTAGCAATAGATCTTT
TAAAACGATGTAAAACCATTCAGGGTAATTTTTCTTGTCAGTGGCCAGTGGCATCCCTGA
CCTCCAGAAAGAAGCCATGCAGTATAAACTCCTTGTGGTGAACAAGTCTGTTCATGGCAA
ACGTGGCTCGAGCCCACCAGACACCAGCGCAGAGCGGGGGCAGCCTGCCCCGCTGTAGCA
CAGGAGCAATGGTGTAGCGTCTTCCAAGGCCTTACTTTTTTTTCAGAATGCTTTAAGTGT
TGGCTGTATGTGCTGGGTTCTCTAAAGAAGTTTCTCTTCCCGAGCTGCTTTTCCGAGCAG
TTTTGTTCGTGTCTCTTAAGGAAATCACCAGCTTTGGCATCTGACCAACAAACAGTGAGT
GGGAGACGTGATTTCCGATGCGCATCTTCAGAGTCAAACACACCCTCCCTCGTGTACAAC
CAAAGAACAGGCATTATGAAATTGTATAGTAATATCTAGAAACACCACTTCCCTCCAACC
TGCGACTTTTGTACAAAATTCAGAGAATCTGTAAAGAACCCCCCACCCCTCAAAAAAGCC
TGAGCACTTGCTGTTGTTCTTTTGTGATTATGGCTGTACATTTAGTTGTCTTTCTAGTTA
TGAAAAGAACGTTGACACACGTAGGCATGGCCGCCCCACTCAGGTGTTTGTTGTTACAGT
GCTAATGGATCCTGGGTGCAGTAGGCGCTGGGTCCTCCTGACCTCTGTTTCACTGTTTGT
GGTAAGGTAGCCACACCTGGAGCTCACGTGTAACCTGGAGCGCTGTGCTACCAGTAGCTT
TGGGGTTTTGGAAGCAGACACACCAAAGCCGAGCATCATAGAGAATGAATCCCTCTGGAA
ACACTTACTCTCAGAAAATGACACTCTTCCCACATGTGGGGTTTTCTCAGTGTTCTAAGT
TTTTAAGAAGTTTTATCTTGTGTATTTGCATCAAACATTTCTTTATGTGCTAAATGTTTG
CTCTTTAAAAATGTCTCAGAGTTAGTTACCAGCTTCCTTGATTTCATCTATACACAATGA
TTAAGTGCATTTAATATTGGTAATTTAATGAAAAGCATTCCTTGCCCAATGGATGTAAAC
ATTTTTGAAAGAATAAAGCAGAATTATATAATATGAAATGCTATGTAAAGTTTTCTATGT
AAAAAAATATTATGTATAATACTGTTAAATACCCCATGCTTTGATCAGGTGGAAAAAATC
AATAAAGTTTTAAAAAGTAAA
3' upstream sequence
GCTGCTCCCAGTGTCATCATTTATATCCTGTCAAGCCACGGGTTAGGCTAGTTTGAGTTT
GTTGGCATGGCAGAAACAAACTCTTAGTTTCCGTTTGGGCAGAGAGGATGGTGTAGGTAT
AAGTGCTTGTCCTGCAAGCCTGGTGACCTGGGTCTGACCTCTGGGCCCACGTAAAGGGGG
AGACAGAGAACTCGCTCCACAATGGTTCCTCTGGCCTCCACACGGGGTGTTCCCCCACAC
TCACACAATCATAAAATAAAACTTAAAAGCCGGGCGTGGTGGCACACACCTTTGATCCCA
GTACTCAGGAGGCAGAGGCAGTCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGT
GAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAACAAAACAAAAC
AAAACAAAACAAAAACCTTAAAGTAGAAGGCAAGAAGTATTCATAACCGCAGTTGTGGTC
AAGGTGTGGTCCCACCAACCGCTGACCCTCCTCTCAGGTCCAGTCCATTGCAAGGAAGTC
TAACAAGTCTGGGGGTGGGGCTGGGGGGGAGGGTGTCCCTGGGAGGGCTCCCCTCTGGTT
TGTCCAGGCTTTTTCGTTTCCTAACTTGAGATTCTTGGAGACATCTAACTTGCTGGGGTC
CGTTGTTTGGGTAGTCTGGGAGTCCCAGTGTGCCTTCATGCTTCTAGTACAGTAGCTGTG
GGTTCAAGACTGCAGGAGCCAGCCATGCCGTGCCCGGAAGCGGTGGGTGTCCCTCAACAG
CGCCTTCTCCAGCTCTCAGTTCCCTCTGCGTTCTCTTCCACGGTGGTCCCTCACTATTGC
AAGGAAATGATAACATTTAGGACCCTTCTGAGCATGATGGTGAGAGATGAACTTCAAAGC
AAAGGTAAGGTGGATGCTCGGCCAGTTATAGCCCCAATCTTTTTTTTTTTTTTTTTTTTT
TTTTTTGAGATGATTTCATATAGCCCAGGTTAGCCTTGAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Arfgef2 (ENSMUSG00000074582)
Transcript ID ENSMUST00000099078
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1793 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information