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Target CDS Information

Gene Symbol (Gene ID) Btbd11 (ENSMUSG00000020042)
Cross Reference
CCDS CCDS24091.2
EMBL AK018115, AK030864, AK039038, ...show all
Fantom 5830434K11, 6330404E16, A230089F01
GO GO:0003674, GO:0005575, GO:0016021, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0007165, ...show all
MGI_trans_name Btbd11-001
OTTP OTTMUSP00000019039
OTTT OTTMUST00000042360
protein_id AAH59036.1, AAH72592.1, BAB31077.1, ...show all
RefSeq_mRNA NM_028709.2
RefSeq_peptide NP_082985
UCSC uc007glg.2
UniParc UPI0000512178
Uniprot/SWISSPROT Q6GQW0
Vega_transcript Btbd11-001, OTTMUST00000042360
Vega_translation 208323, OTTMUSP00000019039
Definition protein_id:ENSMUSP00000100944
translation:
MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMH
SRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAV
PGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTA
AALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTAC
MESLFRDIYSRVLASGLPRSCSGPGPGSSSGSGPGPGSGPGAPAADKERETPGGGAASGG
PCSAASSASGGSSCCAPPATAATAVPPTTATAAVAANHHHHHHTLHEAPKFTVETLEHTV
NNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQ
SLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPMHHKQGALYWEPEALYTLCYFMH
CPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARL
LLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPD
GINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALT
FAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPL
IGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLA
ETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQ
QHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGP
YPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSK
PTNDNTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCE
IICAKSINTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGA
GQDVLQDLQRTLAIRIQSIHLSSSKGSVV

Chromosome 10
Length
Position(start - end)
271019
85387329 - 85658349
Orient to Chromosome plus
Link Location : (10:85387329-85658349)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Btbd11 (ENSMUSG00000020042)
Transcript ID ENSMUST00000105307
Reports
substitution
cSNPs7
Insertion153
Deletion168
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num6
non-synonymous num1
synonymous substitutions 85387451 (p.Ser41Ser), 85387835 (p.Val169Val), 85624993 (p.Asn583Asn), 85647742 (p.Thr962Thr), 85647748 (p.Asp964Asp), 85658205 (p.Leu1062Leu),
non-synonymous substitutions 85388329 (p.Val334Ala),
B6 transcript
(ENSMUST00000105307)
MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMH
SRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAV
PGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTA
AALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTAC
MESLFRDIYSRVLASGLPRSCSGPGPGSSSGSGPGPGSGPGAPAADKERETPGGGAASGG
PCSAASSASGGSSCCAPPATAATAVPPTTATAAVAANHHHHHHTLHEAPKFTVETLEHTV
NNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQ
SLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPMHHKQGALYWEPEALYTLCYFMH
CPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARL
LLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPD
GINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALT
FAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPL
IGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLA
ETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQ
QHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGP
YPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSK
PTNDNTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCE
IICAKSINTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGA
GQDVLQDLQRTLAIRIQSIHLSSSKGSVV*
MSMv4 transcript
MARRGKKPVVRTLEDLTLDSGYGGAADSVRSSNLSLCCSDSHPASPYGGSCWPPLADSMH
SRHNSFDTVNTALVEDSEGLDCAGQHCSRLLPDLDEVPWTLQELELLLLRSRDPRAGPAV
PGSLPKDALAKLSMLVSRALVRIAKEAQRLSLRFAKCTKYEIQSAMEIVLSWGLAAHCTA
AALAALSLYNMSSAGGDRLGRGKSARCGLTFSVGRVYRWMVDSRVALRIHEHAAIYLTAC
MESLFRDIYSRVLASGLPRSCSGPGPGSSSGSGPGPGSGPGAPAADKERETPGGGAASGG
PCSAASSASGGSSCCAPPATAATAVPPTTATAAAAANHHHHHHTLHEAPKFTVETLEHTV
NNDSEIWGLLQPYQHLICGKNASGVLSLPESLNLHRDPQRPSKPGELPMFSQSELRTIEQ
SLLATRVGSIAELSDLVSRAMHHLQPLNAKHHGNGTPMHHKQGALYWEPEALYTLCYFMH
CPQMEWENPNVEPSKVNLQVERPFLVLPPLMEWIRVAVAHAGHRRSFSMDSDDVRQAARL
LLPGVDCEPRQLKADDCFCASRKLDAVAIEAKFKQDLGFRMLNCGRTDLVKQAVSLLGPD
GINTMSEQGMTPLMYACVRGDEAMVQMLLDAGADLNVEVVSTPHKYPSVHPETRHWTALT
FAVLHGHIPVVQLLLDAGAKVEGSVEHGEENYSETPLQLAAAVGNFELVSLLLERGADPL
IGTMYRNGISTTPQGDMNSFSQAAAHGHRNVFRKLLAQPEKEKSDILSLEEILAEGTDLA
ETAPPPLCASRNSKAKLRALREAMYHSAEHGYVDVTIDIRSIGVPWTLHTWLESLRIAFQ
QHRRPLIQCLLKEFKTIQEEEYTEELVTQGLPLMFEILKASKNEVISQQLCVIFTHCYGP
YPIPKLTEIKRKQTSRLDPHFLNNKEMSDVTFLVEGRPFYAHKVLLFTASPRFKALLSSK
PTNDNTCIEIGYVKYPIFQLVMQYLYYGGPESLLIKNNEIMELLSAAKFFQLEALQRHCE
IICAKSINTDNCVDIYSHAKFLGVTELSAYCEGYFLKNMMVLIENEAFKQLLYDKNGEGA
GQDVLQDLQRTLAIRIQSIHLSSSKGSVV*
homology99.91 (1110 / 1110)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Btbd11 (ENSMUSG00000020042)
Transcript ID ENSMUST00000105307
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CAGACAAATAAATAGATAGTAGCAAGCCAGCGTGACAAGGGCCCAGAAAT
GTGAAGCCATCGAAGAGGGTGGGGTGGTGGAAACACCCAGGATAGTTTTGGGAGATCAGG
GTGGGCTTCTTGTAGGAATAGGATTGTGTAAGGGAGGTAGGAATCTTTGAATGAATAAGG
TTTTTCCTAAGGTAGGTAGAGATAGACAAATAGCCAAGCAATGATGCCATTAGACACAGA
AATGCAGCAGACTCACACATATATTTTGTATCTTTCTTTAGCTGAAAAGAATATTCTCCT
GTGCACAAATTTAAGTTTGAGCAGTCTAGAGCATTGTCCACCAGAACCACAGAGTGGCCG
GAACACACACACACACACACACACACACACACACACACACACACACACACACCCTGGAAC
TTAAGGGTAGATTCCTGTCTGCCGAACAAACCTAGAAAGTCCTGGTGACAGGTGGTTTAT
GGCTAGAGATTCGCTTCCCAGTGGCAATTATCAGTCTCCCCCTCACTACTTTCCTGTTTT
ATTTCCTTCCATGCTGGAGCAAACCCAGGCTGAGAAGCGGCACCCGCCTGAATTAGTCAG
GGTGCCTGAAGAGGGAGGAGAAAGGTGCCTCTTGTATGGGCTGGTGGGAGGGACAGAGAA
ATCTAAAATGCCAAAGCAGAAAGTAACCCTCGGACAAACACTTTATGAACCGCAGAGTGG
AACAAATAACGATATAAATGATATTTTTGTCGATAGTTCGAAAGCAGAAACTAGGGAAGC
TACAGTTGCAGGATGACTGTTCTTCTCCAGGCTTCCACCTAGGCCGCGGATCCCTCCTAG
CTGCAGCCCTGGTCAAGGCCTGGGGGGGCGTGTCTGAGGGGCGGGGCCGCATGGAAGGGA
GGAATAAAAAAAAAAAAAAAAACCCTAAGTAATTAGCATCCCCCGATTCCATTGGCTCTT
CGACGGCCCTGCTTTGCATGCGCCCGCCCTCTGACTGCTTGGTTTGCTGG
1 EXON 1 85386814 85388478 - 1 1665
GGCTCAGCAGGGTTTTGCAGCCGCCTGGCTACAGCGCTTTAGTGCGGGGCGGGAGCTCAA
GAGAACCGCGGCCCGGATCCCGGAGCCGGGGGAGCCCGTAGCCCGCCGAGCTGCGGCGGC
CGTATCTGGGGCGATCTAGGTCTTATCGACACTGTGGCCGGCTCTCGGAGGCTTCTGCAT
CCGTCTGGTCCCAGGGAGGAGAGGACCAGACACTTTTATTTTGGATGAAAGGCGCGGGTC
CTGGCGGGAGCTTCCTTCCCGGCCTGGCTCGCGGCTCAGTGCGCCCTCGCTCTGGCCCCG
ACTCCAGAAGATGACTTCGGGTTCCGCCGTGTATCTTCCCGTGGTGACGGCTCGGGGAGA
CAGGCGAAAGTAGTGACACTTGCTGGCAACGCCAGGTGGGAAAGTGAGCCTAGGCGACGT
GGAGCCCCGCTGTCCCCGAGGACCCCGGTGCCCACAGATCCTTGCCTTTCCTTCCCCTCG
GCTCCACGGCGGCTGCAGCATGAAGTGGCGCAGCGATGGCCAGGAGAGGTAAGAAGCCTG
TGGTGCGAACGCTGGAAGATCTGACGCTGGACTCGGGTTATGGTGGCGCGGCGGACTCTG
TGCGCTCCTCCAACTTGTCTCTGTGCTGTTCTGACTCGCACCCGGCGTCCCCGTATGGCG
GGAGCTGCTGGCCGCCTTTAGCTGACTCCATGCACAGCCGGCACAACAGCTTTGACACCG
TCAACACTGCCCTGGTGGAAGACTCCGAGGGGCTGGACTGCGCCGGTCAGCACTGCTCGC
GGTTGCTGCCGGACCTCGACGAGGTCCCCTGGACCCTCCAGGAACTGGAGTTGCTGCTGC
TGCGCTCGCGGGATCCCCGGGCAGGCCCAGCGGTCCCCGGCAGCCTGCCCAAGGACGCGC
TGGCCAAGCTCTCGATGCTGGTAAGCCGGGCTCTAGTGCGCATCGCTAAAGAGGCGCAGC
GCCTGAGCCTGCGCTTCGCCAAGTGCACCAAGTACGAGATCCAGAGTGCCATGGAGATCG
TGCTGTCCTGGGGCCTGGCGGCTCACTGCACCGCTGCCGCGCTGGCCGCGCTGTCCCTCT
ATAACATGAGCAGCGCTGGCGGCGACCGCTTGGGCCGTGGCAAGTCGGCGCGCTGCGGCC
TCACCTTCTCCGTGGGCCGCGTGTACCGCTGGATGGTGGACAGCCGCGTGGCGCTGCGCA
TCCACGAGCATGCCGCCATCTACCTGACCGCCTGTATGGAGAGTCTCTTCCGGGACATCT
ACTCGCGGGTGTTGGCCTCCGGGCTACCTCGTAGCTGTAGCGGTCCTGGCCCTGGCTCCA
GCTCCGGTTCTGGCCCAGGCCCCGGCTCAGGCCCCGGAGCCCCTGCAGCGGATAAGGAGC
GCGAGACTCCGGGAGGGGGAGCGGCGAGCGGTGGCCCTTGCAGCGCAGCCAGCAGCGCCA
GCGGGGGCAGTAGTTGTTGCGCCCCGCCAGCCACGGCGGCGACCGCAGTCCCGCCAACCA
CAGCCACCGCCGCCGCCGCCGCCAACCATCATCACCACCACCACACGCTTCACGAAGCGC
CCAAATTCACCGTGGAGACCCTGGAGCACACGGTCAACAACGACTCGGAAATCTGGGGGC
TCTTGCAGCCCTACCAGCACCTCATCTGTGGGAAGAACGCCAGTG
INTRON 1 - 2 85388479 85546441 157963
GTAAGTGGCTCTGTCAACTCCGGGT..........CCTTCTCTGTCCCTCCCTACTGCAG
2 EXON 2 85546442 85546591 1 1 150
GTGTGCTGAGCCTGCCAGAGAGCCTGAACCTGCACCGAGACCCACAGCGGCCCAGCAAGC
CGGGAGAGCTCCCCATGTTCAGCCAGTCAGAGCTGAGGACCATCGAGCAGTCCCTGCTGG
CCACACGGGTGGGCAGCATCGCCGAGCTCA
INTRON 2 - 3 85546592 85561504 14913
GTAAGTGGACACTCTCTCCAAACCT..........TCTGAAATTTTGCTTCTGTCCATAG
3 EXON 3 85561505 85561709 1 2 205
GTGACCTTGTGTCCCGGGCGATGCACCATCTACAGCCCCTCAATGCGAAGCACCACGGTA
ATGGCACGCCCATGCACCACAAGCAGGGGGCGCTCTACTGGGAGCCAGAGGCCCTGTACA
CGCTCTGCTACTTCATGCACTGCCCGCAGATGGAGTGGGAGAATCCCAACGTGGAACCTT
CCAAGGTCAACCTCCAGGTGGAAAG
INTRON 3 - 4 85561710 85598724 37015
GTACGTCTTGCCTGACTTCCGAGCA..........TCTCCGCCTCTCTCCTCCTGCGCAG
4 EXON 4 85598725 85598877 2 2 153
GCCCTTCCTCGTGCTGCCCCCTCTCATGGAGTGGATCCGAGTGGCCGTGGCGCATGCCGG
CCACCGCCGCAGCTTTTCTATGGATAGCGACGATGTCCGCCAAGCCGCCCGGCTGCTGCT
TCCGGGAGTGGACTGCGAGCCGCGCCAGCTCAA
INTRON 4 - 5 85598878 85624902 26025
GTAGGTGGAGGGGGAAAGGGGATGG..........CCATCTCTCCCTCCCTACCCCTCAG
5 EXON 5 85624903 85625068 2 0 166
GGCGGACGACTGCTTTTGTGCTTCTCGGAAGCTGGACGCCGTGGCCATCGAAGCCAAGTT
CAAGCAGGACTTGGGCTTCCGGATGCTGAACTGTGGACGGACCGACCTGGTGAAGCAGGC
AGTGTCTTTGCTGGGGCCGGATGGAATCAACACCATGAGCGAACAG
INTRON 5 - 6 85625069 85627196 2128
GTACCAATATGCTTGGACCTCATCT..........CGTCTCTGGTTTTTAACCACCGCAG
6 EXON 6 85627197 85627286 0 0 90
GGTATGACCCCCTTGATGTACGCCTGCGTCCGTGGGGACGAGGCAATGGTGCAGATGCTG
CTGGATGCCGGAGCTGACCTGAATGTGGAG
INTRON 6 - 7 85627287 85629211 1925
GTGAGGGTGCGGAGGGCTGCAGGCC..........GAAAATAACTTCAATTTGTTTATAG
7 EXON 7 85629212 85629313 0 0 102
GTTGTCAGTACTCCTCATAAATATCCATCCGTCCACCCCGAGACCCGCCATTGGACGGCT
CTGACTTTTGCTGTGTTGCATGGACATATTCCTGTAGTTCAG
INTRON 7 - 8 85629314 85631087 1774
GTATTAACGGATTTCCCTACCCACA..........CTCAGTGGTCACTCTTCCTCTGCAG
8 EXON 8 85631088 85631181 0 1 94
CTCCTCCTGGATGCTGGGGCCAAGGTGGAAGGCTCTGTGGAGCATGGCGAGGAGAACTAT
TCAGAAACTCCCCTCCAGCTTGCAGCCGCTGTTG
INTRON 8 - 9 85631182 85631292 111
GTAAGTCACCAGTTCCACTTCAGAC..........GAAATCCCCTTCTCTGGGCTTGCAG
9 EXON 9 85631293 85631428 1 2 136
GAAATTTTGAGCTGGTTAGTTTGCTGTTGGAGCGTGGTGCGGATCCCCTGATAGGAACCA
TGTACAGGAATGGAATTTCTACAACCCCCCAGGGTGATATGAACTCTTTCAGCCAGGCCG
CAGCCCATGGACACAG
INTRON 9 - 10 85631429 85632088 660
GTAGGCTAGGATGGGCCAAGGCCGC..........TCCTCTCTGGGTTTATGATTGACAG
10 EXON 10 85632089 85632309 2 1 221
GAATGTGTTCCGCAAACTGCTCGCTCAGCCAGAGAAGGAGAAGAGCGATATCCTGTCCCT
GGAGGAGATTCTGGCTGAGGGGACTGACCTGGCAGAAACAGCCCCGCCCCCCTTGTGTGC
CAGCCGCAACAGCAAGGCCAAACTGAGGGCCCTGAGGGAGGCCATGTATCACAGCGCTGA
GCACGGCTACGTGGATGTCACAATTGATATCAGGAGTATAG
INTRON 10 - 11 85632310 85633683 1374
GTCAGTCTGAGCACCATTCACCACT..........TGCCTCCCCCCCACACCCCATCCAG
11 EXON 11 85633684 85633862 1 0 179
GTGTCCCATGGACTCTACACACATGGCTGGAGTCACTTCGGATTGCCTTCCAGCAACACC
GCAGACCTCTCATCCAGTGTTTGCTCAAGGAGTTCAAGACCATTCAAGAGGAGGAGTACA
CAGAGGAGCTAGTCACCCAAGGCCTGCCCCTGATGTTTGAGATCTTAAAAGCAAGCAAG
INTRON 11 - 12 85633863 85640502 6640
GTACAAGGGGCGAGGAGGGGCGAGG..........TAATGCCATTCATCTCCCTTCACAG
12 EXON 12 85640503 85640608 0 1 106
AATGAAGTGATCAGCCAGCAGCTGTGCGTCATCTTCACACACTGTTACGGTCCCTACCCC
ATCCCCAAGCTCACGGAGATCAAGAGGAAGCAGACCTCACGCCTGG
INTRON 12 - 13 85640609 85645487 4879
GTGAGCAGTGGTCCGGGTATACTCA..........CGCCCACTCCCTCTTTCTGTTCTAG
13 EXON 13 85645488 85645590 1 2 103
ACCCTCATTTTCTTAACAATAAAGAGATGTCCGACGTGACCTTTCTGGTAGAGGGAAGAC
CCTTCTACGCTCACAAAGTGCTCTTGTTCACAGCCTCTCCCAG
INTRON 13 - 14 85645591 85647711 2121
GTACGTACCCTTGGCTTTGCCTGTG..........CTTTTGATCTCTGTATGTTATTCAG
14 EXON 14 85647712 85647793 2 0 82
GTTCAAGGCCCTCCTCTCCAGCAAGCCAACGAATGATAACACCTGCATAGAGATTGGCTA
CGTGAAGTATCCCATCTTCCAG
INTRON 14 - 15 85647794 85651606 3813
GTGAGCCCGAGGGTTAGCCTTCAGC..........GCTCACGGTATCTTATTCCTTCCAG
15 EXON 15 85651607 85651675 0 0 69
CTCGTCATGCAGTATCTCTACTACGGTGGCCCAGAGTCACTTCTCATTAAAAACAATGAG
ATCATGGAG
INTRON 15 - 16 85651676 85654477 2802
GTAAGGAGACCACTGTGGTTTTAGC..........TAACAGCCCTTTTTGTGGATTCTAG
16 EXON 16 85654478 85654591 0 0 114
CTTCTGTCTGCTGCTAAATTTTTCCAGCTGGAGGCTCTGCAGCGACACTGTGAGATTATC
TGTGCAAAAAGCATCAATACTGACAACTGTGTGGATATCTACAGCCACGCCAAG
INTRON 16 - 17 85654592 85658139 3548
GTAGGTCCCCCTGTGTTATGTTGCT..........CTGCTTCCTTTCCCTCTCCCCACAG
17 EXON 17 85658140 85660292 0 - 2153
TTCCTTGGGGTGACAGAGCTCTCGGCGTACTGTGAAGGCTACTTTCTTAAAAATATGATG
GTCCTCATTGAAAACGAAGCGTTCAAGCAGCTCCTGTACGACAAAAATGGCGAAGGGGCG
GGCCAGGATGTGCTTCAGGACCTACAGAGGACGTTGGCCATTAGGATTCAGTCTATCCAC
CTGTCGTCTTCCAAGGGTTCCGTGGTATGAGACGCCCCACGAGGCAATGGTTCCCAGGAG
CAAGGTTTCTGGCTCCCTTCTGCATTGGCACCACAAAAACACAAAAATTGTTCCTGGTGT
CTGTCTGTCTGTACTGGGCCAAGGAGCTGCCTCCACTGCCTCAGCTACTCTCCGGTCAGT
GAACTTGGCTTCCGTGTGCTCCTGAGCGAAGAACCGTCCACGTGTCTGCAGGTTAGATTG
TAGCAGAGGCCAGAACCTGCAGGCCAACTCACAGCAACCAAGCCCCCTCCAGTGCCCCGG
AGCCATGGGCACCTGCTGCCAAGGACCATGATCTAGCAGACGGACCAAGGCGTAGAGATC
TCTGCTTCCTGGTTGACTGATGAAAACCTCAGTAGTATGACCTTGAAAAGCATCACATCA
CCCACGAATGACCTTGGAGGCTGTACTTGCCCAGGCATCAGCCCTGGTGGCTAGTTGTTG
ATGCGGTTGCCCGGCATGAGGAAGTCACATGGCCAATTTTTAGGGGTGGGAACTTTTTAA
AAAAAATGTTCATGTCTAGCAAACACAGAGCAGTCTCGTAGTTTCGAATATATTTCTAAA
AGCTTAACAGTTCATTTTCGACTGAATTGTGTTTAGGGAATCTGTGTTTGGGGTTCTTTT
CATTTTTTTTTAAGATAGTGAGTTGCAGGTCCGTGCCGTGTAAACTTGCATCTGACAAAT
TCCTGCTGATACTATACAAGGTCACATATTCCTGCCTTAGTGATTCGATCATGGTTCCAC
AAAAGAGGTGCACTGCCAATTATCTCTAATTATCTCGAATCTAATAGTTGACAATAACCT
GCATGCTGATTGTGGTTTGGGGGTGAGACTAGGGCACCCCCACATAACAAAACATGCATT
TGCATGGACCAAACCTGTACAACATCATGTTTGTGCTTTGTTTTCTTTTGCCAAAGTGAG
ATATGTTCTCTCGCTTCTCGCTAAAAGCCCACTTGGTGAAACAAACATATCTGTTTCTTT
TCCTGATCACGAATGGCTCTGGGGATACTTTTGCAGAAACATGTTCATTTCTGATAACTG
AGTGGGGGTGGGGGAGCACGTCAGAGAATCTACTATTAATCTCAGAGCTTTATCTGTATT
CTCAGAAGATGTTCATAGTTTGTTACTAGCCAGAGAGTATGACTATGTTAGATTATTTTT
AAAGATGAAAAGTGTAAGATAGGCTTGACACTCTCTGGATTCTGAGAGTGTGCAGTCTGC
AATTATCTATGATGAAAGTTTATATTGACAGGGTTGTGTTTACTCTGCCATATAATATAT
ATACATAGATGTATATATATATGCAAAAGAGATTGGTAAAGTGCCACAATACTCCAAATA
ATTCTTGAGTTGCGGCCCTTTTTTTCTTTCCTTGTTCTTTATTTTTAATCCTAGATACAT
TAAGGTAAAAGCTAGGAGAATGGCTTTTGTCTTTTGGGATGGCCAAGTTTTGTTGATAAC
CCCATTTCCTAGCATGATTTTTGGGAAGTTACGCCAAACCCTAGAGTCTACAGGAACTTG
TATCCTTCGCCTGTTGTCCTACTCCCTCAACACCTGTCAAGGACCCACATCAAGTCTCGT
TTCATGGGTGTGGTGTGCAAGGTACCCAGTCTGAGTCTATCTGCAGCATCAACTCCTTTG
TGATGCAGGCCCCCGAGGCCTCTCTCTTCCATGTAGTCATCCATGAGCCTACCCAGCCCT
ACCATCAAATGATTATGGGAGCAACTGCTTGAGGTGACAACCAAGTCACAGACACAAGAG
TGACACACTGTCGCTTGCCTTCAGGGATGCTGCTCTCTAACCCAGCTGGTTCTCTGTGGA
TGTCGAACACTCTCTGGACCTCCAGGTGTTGATCTGTACATTGGTAACTCCCACCTAGAC
CTCTGTTCAGTTTGGTGTGCTTTCTCTGCCATTAAAAGAAATTATTTCCCACA
3' upstream sequence
GTTTGCATCCTCTTTATGGTACACAGGAGTGCTTCCTCCCTTGGCTCATGCCCGGGCTCC
CTCAGCTAAGAGATTAGAATGCAGCTCTGCAGAAAATGTGGAGGATAGGAATGGTGCCAC
AGAGGACAGAGAGGATGAGATGCATGCTGAGCAGGGTGGAAGGGTCTGTCTACACATCGG
GGTGATTCTCCAGGTTTCCTTTCCTTAGGTATGTCTGCCTTGGCCACTGCAGTGGTACCT
CTTGTCTACAGTGGAGATCTTGCCTGTGGGAGCCAAGTTCTGGCTGTTCTCAGTGTACTG
TGGTGACACTTTGGGGAATAGAGGATAAGAAAATTACAAGTCTCAGGCCATCAAGATGAC
TCAGTGGCCAGCCCACAGTGGTGGTACATGCCTTTAATTCCAGCACTTTGGAAACAGAGG
CAGGTGGGTGGGTCTCTGAGTTTGAGGCCAAGTCTATATAGTTCTAAGACAGCTGGAACT
ACATCATACAGTGACCTATCATTTTAAAAAATAGCTCAGTGGTTGCATGTACTTACTGTG
CAAAGCTAGAGACCTGAATTTGATATCTAGAGCTGGTATAAAGGTAGAAGGAAAGAACAG
ACTCCACGCAGTTGTTCTCTGACCTCCACACAGATGTGACAGCACTGCATCTCACACTGC
ACACAGGCACACGCACAATAAAACTTAGTTCTTTTAAAATTTGTCTTTAAAGGCAAGTCT
CTGAGGGTGGTGCATGCCTATAATCCCAGCATGCAGGAGGCAGAGGCAGGAGGATTGATA
CAAGTGCAAAGCCAGTCTGATCTATGTAGTAAATTCTACATCAGTTGGAAATACATGTCA
TTAGGGTTGAAATTGCTTTAATGAAACACCATGACCAAAACAAGTTGTGGTGAAAGGGGT
TTATGTGGCTTACACTTCATTGATGGAAGTCAGGACAGGAACCGATGCAGCTCAGGGACC
TGGACACAGGAGCCGATGCAGAGGCCATGGAAGGGTGCTG..........

Sequence Detail Report

Gene Symbol (Gene ID) Btbd11 (ENSMUSG00000020042)
Transcript ID ENSMUST00000105307
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1110 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
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