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Target CDS Information

Gene Symbol (Gene ID) Ces1b (ENSMUSG00000078964)
Cross Reference
CCDS CCDS40431.1
EMBL AC121985
GO GO:0005575, GO:0008150, GO:0008152, ...show all
goslim_goa GO:0003674, GO:0005575, GO:0008150
MGI_trans_name Ces1b-201
RefSeq_mRNA NM_001081372.1
RefSeq_peptide NP_001074841
RefSeq_peptide_predicted XP_006531215.1
UCSC uc009muk.1
UniParc UPI0000605DD9
Uniprot/SPTREMBL D3Z5G7
Definition protein_id:ENSMUSP00000105210
translation:
MWLHALVWASLALCPIWGHSPSSPVVDTTQGKILGKYTSLEGFEHPVAVFLGVPFAKPPL
GSLRFAPPEPAEPWSFVKNATSYPPMCSQDAVAVQLLSDMLSTKKESIPPLFSEDCLYLN
IYSPADLTKSSLLPVMVWIHGGGLMTGGASLYNGLALSAHENVVVVTIQYRLGIWGLFST
GDEHSRGNWAHLDQLAALRWVQDNIANFGGNPDSVTVFGSSAGGVSVSVLVLSPLAKNLF
HRAISESSVVLENIVITLDLVACDLSQMIATVSGCNDTSSTAMVQCLRQKTENELLEITV
KLEVTKVGGAASAKKDNTSMSTVIDGVVLPKAPEEILAEKSFSTVPYIVGFNKQEFGWII
PTMLGDLLSEGKMNEETASLLLRRFHSDLNISESLIPAVIEKYLRGTDDPAKKRDLLLDM
FSDVFFGIPAVLLSRSLRDAGVSTYMYEFRYRPSFVSDKRPQTVEGDHGDEIFSVFGIPL
LKEGTSEEETNLSKMVMKFWANFARNGNPNGEGLPHWPEYDEKEGYLQIGATTQQAQRLK
AEEVAFWTELLAKNPPETDPTEHREHK

Chromosome 8
Length
Position(start - end)
23028
93056887 - 93079916
Orient to Chromosome minus
Link Location : (8:93056887-93079916)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Ces1b (ENSMUSG00000078964)
Transcript ID ENSMUST00000109582
Reports
substitution
cSNPs18
Insertion18
Deletion14
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num8
non-synonymous num10
synonymous substitutions 93057052 (p.Gly513Gly), 93068190 (p.Leu260Leu), 93069318 (p.Leu251Leu), 93069342 (p.Ala243Ala), 93076086 (p.Ala125Ala), 93076140 (p.Ser107Ser), 93076197 (p.Ser88Ser), 93079438 (p.Pro58Pro),
non-synonymous substitutions 93057411 (p.Glu489Gln), 93060362 (p.Thr463Met), 93068129 (p.Thr281Ala), 93073344 (p.Val135Met), 93076066 (p.Leu132Arg), 93076132 (p.Pro110Leu), 93076136 (p.Pro109Thr), 93076139 (p.Ile108Val), 93079477 (p.His45Gln), 93079892 (p.Ala9Thr),
B6 transcript
(ENSMUST00000109582)
MWLHALVWASLALCPIWGHSPSSPVVDTTQGKILGKYTSLEGFEHPVAVFLGVPFAKPPL
GSLRFAPPEPAEPWSFVKNATSYPPMCSQDAVAVQLLSDMLSTKKESIPPLFSEDCLYLN
IYSPADLTKSSLLPVMVWIHGGGLMTGGASLYNGLALSAHENVVVVTIQYRLGIWGLFST
GDEHSRGNWAHLDQLAALRWVQDNIANFGGNPDSVTVFGSSAGGVSVSVLVLSPLAKNLF
HRAISESSVVLENIVITLDLVACDLSQMIATVSGCNDTSSTAMVQCLRQKTENELLEITV
KLEVTKVGGAASAKKDNTSMSTVIDGVVLPKAPEEILAEKSFSTVPYIVGFNKQEFGWII
PTMLGDLLSEGKMNEETASLLLRRFHSDLNISESLIPAVIEKYLRGTDDPAKKRDLLLDM
FSDVFFGIPAVLLSRSLRDAGVSTYMYEFRYRPSFVSDKRPQTVEGDHGDEIFSVFGIPL
LKEGTSEEETNLSKMVMKFWANFARNGNPNGEGLPHWPEYDEKEGYLQIGATTQQAQRLK
AEEVAFWTELLAKNPPETDPTEHREHK*
MSMv4 transcript
MWLHALVWTSLALCPIWGHSPSSPVVDTTQGKILGKYTSLEGFEQPVAVFLGVPFAKPPL
GSLRFAPPEPAEPWSFVKNATSYPPMCSQDAVAVQLLSDMLSTKKESVTLLFSEDCLYLN
IYSPADLTKSSRLPMMVWIHGGGLMTGGASLYNGLALSAHENVVVVTIQYRLGIWGLFST
GDEHSRGNWAHLDQLAALRWVQDNIANFGGNPDSVTVFGSSAGGVSVSVLVLSPLAKNLF
HRAISESSVVLENIVITLDLVACDLSQMIATVSGCNDTSSAAMVQCLRQKTENELLEITV
KLEVTKVGGAASAKKDNTSMSTVIDGVVLPKAPEEILAEKSFSTVPYIVGFNKQEFGWII
PTMLGDLLSEGKMNEETASLLLRRFHSDLNISESLIPAVIEKYLRGTDDPAKKRDLLLDM
FSDVFFGIPAVLLSRSLRDAGVSTYMYEFRYRPSFVSDKRPQMVEGDHGDEIFSVFGIPL
LKEGTSEEQTNLSKMVMKFWANFARNGNPNGEGLPHWPEYDEKEGYLQIGATTQQAQRLK
AEEVAFWTELLAKNPPETDPTEHREHK*
homology98.24 (568 / 568)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Ces1b (ENSMUSG00000078964)
Transcript ID ENSMUST00000109582
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AGTTTCTAGAACCCATACATTGGTTCACAATCTATAACTCCATTTCCTGG
TGTCTTGAAGACCTCCCTCTTCTGGCCATTGCGGGCATTGTATACACATGCTGCATAGAT
ATATACGCAGTCAAATGCACAAAAAGTAAATAAAATCTCCAAGAAAGAAAGAATTCATAG
ATAGATGCATATGTGGATGATTAGACAAAGGATTGTGGTTCACGAAGTTTATTTGACTTA
AGGACAATGTTGTGTTTGAATGTGGACTGTTCCCATAGTCTTGGGCTTTCACTTGATCCC
CAGTTAGTGGTGCTGTTTGGAGATATTTAGAAGATATAGACTTCTTAGAGGAAGTATGTC
AGTGGAGGTAGGCTTAGAGAATTTAAAGCCTCTCATCATTTCTAGTTCACTCTCTACTGT
GAGCTTACATTTAAGTATTATGATCAGGCTTGCTACACGTCACCATGCTTTTGTGCTGCC
ATTATGGACTCTTCTCCCTCCGGACACGTTCTCCTCCTTATGATGTCTTTGCTCTTCGTG
TTTCATCACAGCAAGCAGAAGTAACTAATACAAACATTGTGGCTAAGCAGCCCTGATCCA
AAAGCAGTGAGATCATTAACAGAGGTGTACACTGGTGCTTCAGGTTACCTGGCAGGAATA
GTCAACATCAGAAAACAACACTGGCTGAAGAGTGAGATTAGAAAACTTCCAAACTTGAGA
CCATCTCTTCTAGGAAATAGATGCATGGCAGCTGGGAAGTGTGCAATGTTCCCAGCCGAG
CAACACTGGGGACTTCTTCCTGACTGCATGCATCTGCTTGCTGGTACCTGCCTTGGGAAG
TTCAAGGTGCACTGAGCTTTTCAGTTAGAAGTGTTTGCATAAGAGGTTGGCTTGATATCA
GAGAGTGGGTAGTGTCTTTAAAGAAAAAGAAGAGTAAACTCGTAGTGGGTGTGGCTTGGA
GGTCCTAACAAATACCTTGGGAGCTCTTTGGAGAGGGGGAGCTTTATGTA
1 EXON 1 93079865 93080017 - 1 153
ATTATGCTAATTGGTCTAAAGGTGGGTCCACAGCAAAGAGGCTCTCTATTTGAGCTGCAG
ACATCTCCCTGTCTCCTAGAGTTCCTGTTCTTCCTTCTACCATGTGGCTCCATGCTCTGG
TCTGGACTTCTCTTGCTCTTTGCCCAATATGGG
INTRON 1 - 2 93079560 93079864 305
GTAAGTTCTTCTGGATTACAAACAT..........TTCCTCATGTTTTCTCCAATATCAG
2 EXON 2 93079355 93079559 1 2 205
GACACTCACCCTCATCACCGGTAGTGGACACCACCCAAGGCAAAATCCTGGGAAAGTACA
CCAGCTTAGAAGGATTTGAACAGCCTGTGGCAGTTTTCCTGGGAGTCCCCTTTGCCAAGC
CTCCTCTTGGATCCCTGAGGTTTGCTCCACCAGAGCCTGCAGAGCCCTGGAGCTTTGTGA
AGAATGCCACCTCCTATCCTCCTAT
INTRON 2 - 3 93076204 93079354 3151
GTAAGTCACAAGGGTGGGGATTGTT..........TCTCAGATGTTCTCTCCCCTCCCAG
3 EXON 3 93076059 93076203 2 0 145
GTGCTCCCAAGATGCAGTTGCAGTACAGCTACTCTCAGATATGCTCAGCACCAAAAAGGA
GAGTGTAACTCTCCTGTTTTCCGAAGACTGTCTCTACCTGAATATTTACAGCCCTGCTGA
TTTGACAAAAAGCAGTCGATTGCCT
INTRON 3 - 4 93073345 93076058 2714
GTAAGTACAGGGACCATTGGTCCAG..........CCCATGTGGCTTTATTATTGTCCAG
4 EXON 4 93073211 93073344 0 2 134
ATGATGGTGTGGATCCATGGTGGTGGATTGATGACAGGCGGAGCATCACTCTATAATGGA
CTAGCTCTCTCTGCCCATGAGAACGTGGTGGTAGTAACCATTCAATACCGCCTGGGTATT
TGGGGATTATTTAG
INTRON 4 - 5 93072021 93073210 1190
GTAAGATATTAGATTTTTCCTCTCT..........GTCCCCATTCCCTGTCACCTTGCAG
5 EXON 5 93071867 93072020 2 0 154
CACAGGTGATGAACACAGCCGAGGGAACTGGGCTCACTTGGACCAGCTGGCTGCACTACG
CTGGGTCCAGGATAACATTGCGAACTTTGGAGGGAACCCAGATTCAGTGACCGTCTTTGG
GTCATCAGCAGGAGGTGTCAGTGTCTCTGTCCTT
INTRON 5 - 6 93069381 93071866 2486
GTAAGTATACTTGTCACCATACCCC..........TATAAAATCTTCTCTCCTCTGCCAG
6 EXON 6 93069317 93069380 0 1 64
GTCTTATCTCCTCTGGCCAAAAACCTCTTCCACAGAGCCATTTCTGAGAGTAGCGTGGTC
CTCG
INTRON 6 - 7 93068216 93069316 1101
GTACAAACCTGAGCAACAAGAATAT..........TAGAATCTACTGTTGACATCAACAG
7 EXON 7 93068064 93068215 1 0 152
AGAATATAGTCATTACTCTTGACCTTGTTGCCTGTGATCTTTCTCAGATGATTGCTACTG
TTTCTGGGTGTAATGACACCTCATCAGCTGCCATGGTTCAGTGTTTGCGCCAGAAGACAG
AGAATGAGCTCTTGGAGATCACAGTGAAACTG
INTRON 7 - 8 93067054 93068063 1010
GTACATAAGTGTATCCCTTCTAGTC..........ACAATGAGGAAGGAGCTGGCTTAAG
8 EXON 8 93067015 93067053 0 0 39
GAAGTCACTAAGGTGGGAGGAGCTGCTTCAGCTAAGAAG
INTRON 8 - 9 93065025 93067014 1990
GTTGGACTATAAATCAACATGAGAC..........AGTACTGTATTTCTGTCTTTCTCAG
9 EXON 9 93064884 93065024 0 0 141
GACAATACCTCCATGTCCACTGTGATAGATGGTGTGGTGCTGCCAAAGGCACCAGAAGAG
ATCCTGGCTGAGAAGAGTTTCAGCACTGTCCCCTACATAGTGGGCTTCAACAAGCAAGAG
TTTGGCTGGATCATTCCAACG
INTRON 9 - 10 93064074 93064883 810
GTGAGAATGTACAGACCTCTTAGAT..........ATTTTATTATGTGTGTCTTTAACAG
10 EXON 10 93063993 93064073 0 0 81
ATGTTGGGAGATCTGCTCTCTGAAGGCAAAATGAATGAGGAAACGGCCAGTCTTCTCTTG
AGGAGGTTCCACTCTGACCTT
INTRON 10 - 11 93063132 93063992 861
GTAAGAGTCTAGGGAGTCATGGGAA..........ATAATCATTTTCTGATCCATTTTAG
11 EXON 11 93062984 93063131 0 1 148
AACATCTCTGAGAGTCTGATTCCAGCAGTCATTGAGAAGTACTTAAGAGGAACAGATGAC
CCTGCCAAAAAGAGAGACCTTCTCCTGGACATGTTTTCAGATGTATTTTTTGGTATCCCA
GCTGTGCTCTTGTCCCGTAGCCTCAGAG
INTRON 11 - 12 93060435 93062983 2549
GTGAGTCTTACATGAGTCTTATGTG..........TGTCCACAAATCCATGTCTCCTCAG
12 EXON 12 93060303 93060434 1 1 132
ATGCTGGAGTGTCAACCTATATGTATGAGTTTCGGTATCGCCCAAGCTTCGTGTCTGACA
AGAGACCCCAGATGGTTGAGGGAGATCATGGCGATGAAATCTTCTCTGTATTTGGGATTC
CATTATTAAAAG
INTRON 12 - 13 93057429 93060302 2874
GTATTGGCTCTTGTCAGGGTGCGCT..........AAAATATTTTTTCCCTTCCCCACAG
13 EXON 13 93057356 93057428 1 2 73
AGGGTACCTCAGAAGAGCAAACCAACCTCAGCAAGATGGTGATGAAATTCTGGGCCAACT
TTGCTCGAAATGG
INTRON 13 - 14 93057071 93057355 285
ATGAGGCTTGTGGCAAAGATGAAAG..........GAATTCTATTTGATTCTGTTTCCAG
14 EXON 14 93056727 93057070 2 - 344
GAACCCTAATGGGGAGGGCCTGCCTCACTGGCCAGAATATGATGAGAAGGAAGGGTATCT
ACAGATTGGAGCCACTACCCAGCAAGCCCAGAGACTGAAAGCAGAGGAAGTGGCTTTCTG
GACTGAGCTCCTGGCTAAGAATCCACCTGAGACAGACCCTACTGAGCACAGAGAACACAA
ATGAATGGGAGGCTCTGCCAGTCTCAGGACCAGAGGAGCGAAGATGGAACTATTCCACAA
AGGATGACTATTCACCAAAGATGGATCTTACAGAGGAAACTGCACACTTGTACAGTGGAG
ATATTTGTATCTCAACTTGAAAGTAAATTTCCTTTTAGAAATCA
3' upstream sequence
AATCAGGGGTTGTGTCTTGAGCTGAAGATAAATCTATCCTCATGGGTGTGGGGATAGGAG
GATAAAGAGAGATGCTGGCATAGAAAGACATCTTTCTGGGGACGATTTTTGGGAATGGTT
ACTGGAATCTTGGGGAAGATCGCTGATTGTAGGAGAGGTAAGATAGGATTATTACATTAT
GATTCACCTCCATATAGACAACATTGTCACACTTCCATGTTAATGGAAATGCTTGTGGGC
AAGTATGGGACCATAAATCCCCTGAGAATCACAAACCCAAGGGGACTTTCCACACATCAC
AGACTTCTCCACTGATGTCAGCCAGGTGTTCGTTGGTAAGAATAACAGCAGATAGCAAGG
CTGGACAAAGCGTGTCTCTGAGGGTCCAGGCACACAATACTGAACAAACTCTTTTACATG
AAGAAACCAAATCCCACTACCTCTACAAAAATAGCATGGGAACCTCTCATCTCAGAACTC
TTGTGAAGACCTGTTGAGGCCAGGCAAACAGAGCTTTGATGTTCTACTTTCCCTAAGTCG
AGTGCAGGACACAGTCCTGGGTGAAGGTACTAGGGATCTTTTGGTACCTGGAAGAGGTGG
GATAACTGAGAAGATCCCAATTCCAAGTCTGAGGACATGAGGTCTCACTAAAGTTAGGAC
TAGATCAGAGCTAGAGAGACAGCTCCCAGAATGTGCTACTTCATCAGCCCATATAACGCA
ACATCTACTAGAAGTCTACTTGTGGTGGAAAGTGAAAGTATGGAAAGAGACTCTCTGTGA
GGGTCAGGTGAACAGACTGGGAGGACCTGGAAAAATAGGGCAAAGATGGGAGAGAATAAC
TTAAAGTAATGAGCAATTATTCATCTTTGTGTAATTGATACAACTCTGCTTGAAGATAAA
ATATTGAAAGATGTGAATATTGTACACCAACAGCAATTCTTAAATTATTTTTGCAATGCC
AGGCAGTATAGTTTTTAAAGAGGTTTATATAGTAATTTAA..........

Sequence Detail Report

Gene Symbol (Gene ID) Ces1b (ENSMUSG00000078964)
Transcript ID ENSMUST00000109582
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 568 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information