MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Tpmt (ENSMUSG00000021376)

Cross Reference

EMBL	AC096628
GO	GO:0008119, GO:0032259, GO:0070062
goslim_goa	GO:0003674, GO:0005575, GO:0005576, ...show all
MGI_trans_name	Tpmt-002
OTTP	OTTMUSP00000029823
OTTT	OTTMUST00000060977
UCSC	uc007qhr.2
UniParc	UPI00015AA07C
Uniprot/SPTREMBL	D3Z380
Vega_transcript	OTTMUST00000060977, Tpmt-002

Vega_translation

214413, OTTMUSP00000029823

Definition

protein_id:ENSMUSP00000105745
translation:

MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRV
FFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS
GSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL
SYDPTKHAGPPFYVPSAELKRLFEK

Chromosome

Length
Position(start - end)

16157
47025365 - 47041523

Orient to Chromosome

minus

Link

Location : (13:47025365-47041523)
/

Detail Map

name	Tpmt (ENSMUSG00000021376)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Tpmt note : thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]

name	Kdm1b (ENSMUSG00000038080)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Kdm1b note : lysine (K)-specific demethylase 1B [Source:MGI Symbol;Acc:MGI:2145261]

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000021806

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000110118

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000151509

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000136864

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000154802

name	Tpmt (ENSMUSG00000021376)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000124948

name	Kdm1b (ENSMUSG00000038080)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000037025

name	Kdm1b (ENSMUSG00000038080)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000143868

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS26488.1 RefSeq_peptide:NP_058065 RefSeq_mRNA:NM_016785.2 RefSeq_mRNA_predicted:XM_006516926 RefSeq_peptide_predicted:XP_006516988.1 RefSeq_peptide_predicted:XP_006516989.1 Vega_transcript:OTTMUST00000060976 Vega_transcript:Tpmt-001 UCSC:uc007qhq.2 GO:GO:0070062 MGI_trans_name:Tpmt-001 Vega_translation:214412 Vega_translation:OTTMUSP00000029822 OTTP:OTTMUSP00000029822 OTTT:OTTMUST00000060976 UniParc:UPI0000021BB5
definition	note : transcript_id=ENSMUST00000021806 protein_id : ENSMUSP00000021806 translation : MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKCSMQCLEEVDALEERHKAWGLDYLFEKLYLLTEK

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060977 Vega_transcript:Tpmt-002 Uniprot/SPTREMBL:D3Z380 UCSC:uc007qhr.2 EMBL:AC096628 GO:GO:0008119 GO:GO:0032259 GO:GO:0070062 MGI_trans_name:Tpmt-002 Vega_translation:214413 Vega_translation:OTTMUSP00000029823 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0008168 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029823 OTTT:OTTMUST00000060977 UniParc:UPI00015AA07C
definition	note : transcript_id=ENSMUST00000110118 protein_id : ENSMUSP00000105745 translation : MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFEK

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060980 Vega_transcript:Tpmt-005 Uniprot/SPTREMBL:D6RIK3 EMBL:AC096628 GO:GO:0008119 GO:GO:0032259 GO:GO:0070062 MGI_trans_name:Tpmt-005 Vega_translation:214415 Vega_translation:OTTMUSP00000029825 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0008168 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029825 OTTT:OTTMUST00000060980 UniParc:UPI00015AA079
definition	note : transcript_id=ENSMUST00000151509 protein_id : ENSMUSP00000120564 translation : MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKC

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060981 Vega_transcript:Tpmt-006 Uniprot/SPTREMBL:D3YWK6 UCSC:uc007qhq.2 UCSC:uc007qhr.2 EMBL:AC096628 GO:GO:0008119 GO:GO:0032259 GO:GO:0070062 MGI_trans_name:Tpmt-006 Vega_translation:214416 Vega_translation:OTTMUSP00000029826 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0008168 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029826 OTTT:OTTMUST00000060981 UniParc:UPI00015AA07A
definition	note : transcript_id=ENSMUST00000136864 protein_id : ENSMUSP00000120081 translation : MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060979 Vega_transcript:Tpmt-004 Uniprot/SPTREMBL:D3Z217 UCSC:uc007qhq.2 UCSC:uc007qhr.2 EMBL:AC096628 GO:GO:0008119 GO:GO:0032259 GO:GO:0070062 MGI_trans_name:Tpmt-004 Vega_translation:214414 Vega_translation:OTTMUSP00000029824 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0008168 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029824 OTTT:OTTMUST00000060979 UniParc:UPI00015AA07B
definition	note : transcript_id=ENSMUST00000154802 protein_id : ENSMUSP00000121827 translation : MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSY

name	Tpmt (ENSMUSG00000021376) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060982 Vega_transcript:Tpmt-007 Uniprot/SPTREMBL:D3Z0R1 UCSC:uc007qhs.1 EMBL:AC096628 GO:GO:0008119 GO:GO:0032259 GO:GO:0070062 MGI_trans_name:Tpmt-007 Vega_translation:214417 Vega_translation:OTTMUSP00000029827 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0008150 goslim_goa:GO:0008168 goslim_goa:GO:0043226 OTTP:OTTMUSP00000029827 OTTT:OTTMUST00000060982 UniParc:UPI00015AA078
definition	note : transcript_id=ENSMUST00000124948 protein_id : ENSMUSP00000115361 translation : MSFHLGTGDTNLRDKNCLQPVDGTMSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAV

name
type	STS
link
xref	UniSTS_NUM:180527 UniSTS:AW106912 WI_MRC-RH:696670
definition	note : map_weight=1 standard_name : AW106912

name
type	misc_feature
link
xref
definition	note : contig AC096628.14 49055..133273(1)

name	Tpmt (ENSMUSG00000021376)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000060978 Vega_transcript:OTTMUST00000060978 MGI_trans_name:Tpmt-003 OTTT:OTTMUST00000060978
definition	note : retained_intron note : transcript_id=ENSMUST00000133100

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tpmt (ENSMUSG00000021376)
Transcript ID	ENSMUST00000110118

Reports
substitution
cSNPs	1
Insertion	7
Deletion	11
SNPs	+1kb 47043417(c.-1894A>T), 47044736(c.-3213G>T), 47045128(c.-3605A>G), 47045571(c.-4048T>C), 47045573(c.-4050C>T), 47045676(c.-4153T>C), 47045951(c.-4428A>G), 47046144(c.-4621T>A), 47046566(c.-5043G>A), 47047028(c.-5505A>T), 47047688(c.-6165A>G), 47048029(c.-6506C>T), 47048037(c.-6514T>A), 5'UTR CDS 47028919(c.528T>C), 3'UTR INTRON 47025440(c.611-68T>C), 47025757(c.611-385G>A), 47027210(c.610+42G>A), 47027645(c.566-349T>C), 47028349(c.565+533T>C), 47028373(c.565+509A>T), 47028381(c.565+501C>T), 47028641(c.565+241T>C), 47030442(c.480-1475G>A), 47030465(c.480-1498T>G), 47030748(c.479+1670G>T), 47030875(c.479+1543T>C), 47030978(c.479+1440T>C), 47031010(c.479+1408T>C), 47031324(c.479+1094G>A), 47032203(c.479+215T>C), 47032516(c.405-24A>T), 47032521(c.405-29T>C), 47033495(c.405-1003G>C), 47033515(c.405-1023C>T), 47033697(c.405-1205C>T), 47035001(c.404+20G>A), 47037813(c.219-1786G>A), 47037851(c.219-1824A>C), 47037852(c.219-1825C>G), 47038036(c.219-2009C>T), 47038761(c.218+1343T>A), 47039217(c.218+887G>T), 47039252(c.218+852A>G), 47039348(c.218+756G>T), 47040056(c.218+48A>G), 47040331(c.126-135C>T), 47040574(c.126-378C>T), 47041107(c.125+292C>T), 47041168(c.125+231A>G), 47041234(c.125+165G>A), 47041342(c.125+57G>A), 47041345(c.125+54A>G), 47041593(c.-56-14G>A), 47042700(c.-57+404T>C), -1kb 47020189(c.5176T>C), 47020228(c.5137G>C), 47020374(c.4991G>A), 47020376(c.4989G>C), 47020384(c.4981T>C), 47020410(c.4955C>G), 47020430(c.4935G>T), 47020655(c.4710C>A), 47021056(c.4309G>A), 47021083(c.4282A>G), 47021194(c.4171T>A), 47021309(c.4056T>C), 47021692(c.3673T>G), 47021747(c.3618T>C), 47022265(c.3100C>G), 47022496(c.2869C>T), 47022543(c.2822A>G), 47023787(c.1578G>A), 47024588(c.777G>A), 47025173(c.192A>C),
Insertions	+1kb 47043701 (c.-2179dupC), 47047824 (c.-6302dupG), 5'UTR CDS 3'UTR INTRON 47029575 (c.480-609_480-608insGAATAC), 47031032 (c.479+1385_479+1386insA), 47031356 (c.479+1061dupT), 47039380 (c.218+723_218+724insAG), 47040004 (c.218+99_218+100insA), -1kb
Deletions	+1kb 47045742 (c.-4221_-4220delGT), 5'UTR CDS 3'UTR INTRON 47025860 (c.611-492_611-489delCAAA), 47026920 (c.610+330_610+331delGT), 47027930 (c.566-635delT), 47030253 (c.480-1287delT), 47033611 (c.405-1121_405-1120delCA), 47034941 (c.404+76_404+79delAAGT), 47040961 (c.125+435_125+437delCTT), 47042522 (c.-57+580_-57+581delTT), -1kb 47021972 (c.3392delA), 47022827 (c.2537delA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	1
non-synonymous num	0
synonymous substitutions	47028919 (p.Leu176Leu),
non-synonymous substitutions
B6 transcript (ENSMUST00000110118)	MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRV FFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS GSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL SYDPTKHAGPPFYVPSAELKRLFEK*
MSMv4 transcript	MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRV FFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS GSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL SYDPTKHAGPPFYVPSAELKRLFEK*
homology	100.00 (206 / 206)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Tpmt (ENSMUSG00000021376)
Transcript ID	ENSMUST00000110118


..........CTGCCTCCATGTAGATGGGTTCCCTACAGCGCTGGGTGGAATCCCAGAGT
AAGACCCCTCCTCCAGGCTGCGGGGTTCCCATAGCCCAGAGTGGAAATCCAGACTGGGGT
CCTGTCCACCCGGTCCGCAGCTGGTGCCGGCGCCAGAGTGCCAGGTGCAGCCGCCGCCCA
ACTCACCTCCGCCCGGCCGAGGCGCAAGCAGCTCCCTGCAGGGTTCCAAGAGAGCGACGA
GTGGGAAAGCCCGCGGCGCCGCAACCCCGCAGCCCAGCGCGGGAAGCCCCGGCTTGCACA
GGGTCCCCCACGCCACCCCTTCCAAACGCGGGACGCCGGGGAGCCCCGGGGAACGCGCGC
GCCTCCAGACCAGGCTCAACACACAGCCGGCCGCTTTGTGCGGAGCTGTCACCCGAAGCC
CGCCGCCACCCCCAAGCGCGCCCGCGTGAGGCTCGAGTCCCTACCTCAGAGCGCTGGCCA
GGGGGCGAATGCTGCCCTGGGCTGCACCGGGCTGCACCGGACGGCCTGATCCGCACTGCC
AGCTGCAGCAGCTCGGCCGCCGCCGCTTCCGCCCCTATCACGCCGTGACCCGGAGTGGGA
GGAGCGCACAGGCCCAGGGAGCAGGAGGGTCCCGGCGCTCGCCCCGCCCCGATGATTTCC
GCCACTGCGCAATCTCGGCAGCTGCTAAGGGCGGGGCCCTACGCGTTCTGGGCGGAGTCC
TTGCTTCGGGGCGGGGCTTAGGTTTGAAGGTGGGGCCTGGGCGGCCTGGGTGGGGTCACA
GGGTCCTGGGAGGGGCCTGCGCGCCCTGGGCGTGGTCTGCACGCTGGGCGGAGCCTGCGT
GTCCTGGGCAGAGTTCTCACGCCCCGGGCAGGGCCTATAGGACCGGAGCCTGGATAATCT
TTTCCGGGGTGGGATCAGACCACATTGGGCGGGGCCTTCGCCCCTGGGGCGGGGCCTGTG
AGTCCTTGCACAGCTCCCGGCTTACAAAGGCGGGCTAGTGTCTGAGAGGT
AAGCAGCTAGCTGCAGCCAAG
GTAAGTAAGTTCTCAACCGGTAGTA..........TCATTGTAGATATCTTTCCACTTAG
GCACTGGAGACACCAACCTCAGAGACAAAAATTGTCTACAACCCGTGGATGGTACCATGTCCCTTGATATGAAAGAGCACCCTGATGCTGAGGTACAAAAGAACCAAGTACTAACCCTGGAAGACTGGAAAGAGAAGTGGGTGACCCGTCACATCTCATTCCATCAGGAGCAAGGGCATCA
GTAAGACATGTTTGGTCTCTGGCAG..........GTGGTAACTTTGTTCTCTTCCCCAG
GCTGTTGAAGAAGCATTTGGATACATTTCTTAAAGGCCAGAGTGGACTGCGAGTGTTTTTCCCCCTCTGTGGAAAAGCCGTTGAGATGAAATG
GTATGCACAAGTGAGCGTCAGCTAG..........TTGCTGTAAATATGCTTTTCTGCAG
GTTCGCAGATCGGGGCCACACTGTAGTTGGTGTGGAAATCAGTGAAATTGGGATTCGGGAATTTTTTGCAGAACAGAATCTTTCCTACACAGAAGAACCGCTCGCCGAAATTGCTGGAGCCAAAGTATTTAAG
GTTCGCATTGATTATAGTAACTATT..........CCTGTTCTTTGTTGTTTCATTACAG
AGTTCTTCAGGGAGCATTTCCTTATACTGCTGCAGCATATTTGATCTTCCTAG
GTAGGACCGAGTGCTCTCTATGTAT..........ATCCTTTCCCCTCTCTTTTGAGCAG
AGCAAACATTGGCAAGTTTGACAGGATTTGGGATAGAGGAGCATTAGTGGCTATCAATCCAGGCGATCATGATCG
GTAAGTTGGTTTCTTCAGTTGACTT..........GTTTTTTTGTGTGTCTTCTTTCTAG
CTATGCAGATATAATACTGTCCCTACTGAGAAAAGAGTTTCAGTACCTCGTGGCTGTCCTTTCTTATGATCCAACAAAACACGCAG
GTAACACTCGTTTTGGTTTTGTTTG..........TCTTCATCACACTTCTCTTTCCTAG
GCCCACCATTTTATGTTCCATCTGCTGAACTTAAAAGGTTATTTG
GTAAGTTAATGTTTCTTTTTATTAC..........TTTGAAAAATTGTATCTCCTTACAG
AGAAGTAAAAAACCAGCCTGGTAGTGGAGCACACCTTTTATCTCAGCAGGCTAGCCTGGTCTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAAAACCAACCAAACAAACAAAAAACACCCAATCAATCCCTGTATGAGTTTTTTGAACAATTAAAAATTATGTTGAGGGTT
AATGTCTTAGCCATGGTTTCTGTTCCTGCACAAAACATCATAATCAAGAAGAAAGTTGTC
ACACAGCAGCTTCACACCAGAGTCTTCTAGAATGTTCTCTGAAACGTTTAGGCAACTCAG
GTTCTGATTGTTCCTGAGGATGTCAGCCAGGTCCTAGCAGCCTCCAGTGATGAGACAGGC
TCTCACCCTTAGTGACACAAGTGCACTGTCTGAGCCATACACTCGCCGGCTGCTTCTCCA
TGTCCTTGTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCCATCCCCTCTAAGC
TGTCAGTGCTAAATAGTTTTGCAGGTTGGGATGGGATCTCCTCTGTGGGAGCTGAGGGAC
TGGGCTGCTCTCTGGAGATCAGCCCAGCTAGGCTTGCTGTCTTCAGTTGCTTCACATCTT
GAGAGCAGAAGTAGAAGATGTGGGAGAATTTGCTCTGAAACGCCAGGCCTTCTGACCAGA
CAGGCGTTCAATTTTTCAACATAATAGTCTTGCCGATTCCAGCCCACGTGTGGCTTCTTT
TCAGTTCCCTTTGGTACAAGAAGGTTCTCAAGATGATTATATTCATCCTCAAAAAAATTC
TGAAGGCTGTTATGGAACTTTCTGGAAAAATCATGGGTCAGCTTCTTTAAATGAGCTTGA
TATATCATTGGGTATGGAGCAATCTCTCCTGTTGCCCTCTCTCTCTCTTTTAATTTTTTA
AAAAGTATATGAGTACACACTGTAACTGTACAGATAGTTGTGAGCCTTCATCTGGTTGTT
GGGAATTGACTTTAGGACCTCTGCTCACTCCAGTCAGCCTCCTTGCTCAGGCCCAAAGAT
TTATTATTATAAATAAGTACTCTATAATCTGTCTTCAGACAGCACCAGAAGAGGGCATCA
GATCTCGTTACAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCT
TCAGAAGAGCAGTGAGTGCTCTTACTTGCTGAGCCATCTC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTGCCTCCATGTAGATGGGTTCCCTACAGCGCTGGGTGGAATCCCAGAGT AAGACCCCTCCTCCAGGCTGCGGGGTTCCCATAGCCCAGAGTGGAAATCCAGACTGGGGT CCTGTCCACCCGGTCCGCAGCTGGTGCCGGCGCCAGAGTGCCAGGTGCAGCCGCCGCCCA ACTCACCTCCGCCCGGCCGAGGCGCAAGCAGCTCCCTGCAGGGTTCCAAGAGAGCGACGA GTGGGAAAGCCCGCGGCGCCGCAACCCCGCAGCCCAGCGCGGGAAGCCCCGGCTTGCACA GGGTCCCCCACGCCACCCCTTCCAAACGCGGGACGCCGGGGAGCCCCGGGGAACGCGCGC GCCTCCAGACCAGGCTCAACACACAGCCGGCCGCTTTGTGCGGAGCTGTCACCCGAAGCC CGCCGCCACCCCCAAGCGCGCCCGCGTGAGGCTCGAGTCCCTACCTCAGAGCGCTGGCCA GGGGGCGAATGCTGCCCTGGGCTGCACCGGGCTGCACCGGACGGCCTGATCCGCACTGCC AGCTGCAGCAGCTCGGCCGCCGCCGCTTCCGCCCCTATCACGCCGTGACCCGGAGTGGGA GGAGCGCACAGGCCCAGGGAGCAGGAGGGTCCCGGCGCTCGCCCCGCCCCGATGATTTCC GCCACTGCGCAATCTCGGCAGCTGCTAAGGGCGGGGCCCTACGCGTTCTGGGCGGAGTCC TTGCTTCGGGGCGGGGCTTAGGTTTGAAGGTGGGGCCTGGGCGGCCTGGGTGGGGTCACA GGGTCCTGGGAGGGGCCTGCGCGCCCTGGGCGTGGTCTGCACGCTGGGCGGAGCCTGCGT GTCCTGGGCAGAGTTCTCACGCCCCGGGCAGGGCCTATAGGACCGGAGCCTGGATAATCT TTTCCGGGGTGGGATCAGACCACATTGGGCGGGGCCTTCGCCCCTGGGGCGGGGCCTGTG AGTCCTTGCACAGCTCCCGGCTTACAAAGGCGGGCTAGTGTCTGAGAGGT
1	EXON 1	47043104	47043124	-	-	21	AAGCAGCTAGCTGCAGCCAAG
	INTRON 1 - 2	47041580	47043103			1524	GTAAGTAAGTTCTCAACCGGTAGTA..........TCATTGTAGATATCTTTCCACTTAG
2	EXON 2	47041399	47041579	-	2	181	GCACTGGAGACACCAACCTCAGAGACAAAAATTGTCTACAACCCGTGGATGGTACCATGT CCCTTGATATGAAAGAGCACCCTGATGCTGAGGTACAAAAGAACCAAGTACTAACCCTGG AAGACTGGAAAGAGAAGTGGGTGACCCGTCACATCTCATTCCATCAGGAGCAAGGGCATC A
	INTRON 2 - 3	47040197	47041398			1202	GTAAGACATGTTTGGTCTCTGGCAG..........GTGGTAACTTTGTTCTCTTCCCCAG
3	EXON 3	47040104	47040196	2	2	93	GCTGTTGAAGAAGCATTTGGATACATTTCTTAAAGGCCAGAGTGGACTGCGAGTGTTTTT CCCCCTCTGTGGAAAAGCCGTTGAGATGAAATG
	INTRON 3 - 4	47036028	47040103			4076	GTATGCACAAGTGAGCGTCAGCTAG..........TTGCTGTAAATATGCTTTTCTGCAG
4	EXON 4	47035895	47036027	2	0	133	GTTCGCAGATCGGGGCCACACTGTAGTTGGTGTGGAAATCAGTGAAATTGGGATTCGGGA ATTTTTTGCAGAACAGAATCTTTCCTACACAGAAGAACCGCTCGCCGAAATTGCTGGAGC CAAAGTATTTAAG
	INTRON 4 - 5	47035074	47035894			821	GTTCGCATTGATTATAGTAACTATT..........CCTGTTCTTTGTTGTTTCATTACAG
5	EXON 5	47035021	47035073	0	2	53	AGTTCTTCAGGGAGCATTTCCTTATACTGCTGCAGCATATTTGATCTTCCTAG
	INTRON 5 - 6	47032493	47035020			2528	GTAGGACCGAGTGCTCTCTATGTAT..........ATCCTTTCCCCTCTCTTTTGAGCAG
6	EXON 6	47032418	47032492	2	2	75	AGCAAACATTGGCAAGTTTGACAGGATTTGGGATAGAGGAGCATTAGTGGCTATCAATCC AGGCGATCATGATCG
	INTRON 6 - 7	47028968	47032417			3450	GTAAGTTGGTTTCTTCAGTTGACTT..........GTTTTTTTGTGTGTCTTCTTTCTAG
7	EXON 7	47028882	47028967	2	1	86	CTATGCAGATATAATACTGTCCCTACTGAGAAAAGAGTTTCAGTACCTCGTGGCTGTCCT TTCTTATGATCCAACAAAACACGCAG
	INTRON 7 - 8	47027297	47028881			1585	GTAACACTCGTTTTGGTTTTGTTTG..........TCTTCATCACACTTCTCTTTCCTAG
8	EXON 8	47027252	47027296	1	1	45	GCCCACCATTTTATGTTCCATCTGCTGAACTTAAAAGGTTATTTG
	INTRON 8 - 9	47025373	47027251			1879	GTAAGTTAATGTTTCTTTTTATTAC..........TTTGAAAAATTGTATCTCCTTACAG
9	EXON 9	47025179	47025372	1	-	194	AGAAGTAAAAAACCAGCCTGGTAGTGGAGCACACCTTTTATCTCAGCAGGCTAGCCTGGT CTACCAGTGAGTTCCAAGACAGCCAGAGAGACCCTATCTGGAAAAACCAAATAGAAAACC AACCAAACAAACAAAAAACACCCAATCAATCCCTGTATGAGTTTTTTGAACAATTAAAAA TTATGTTGAGGGTT
	3' upstream sequence						AATGTCTTAGCCATGGTTTCTGTTCCTGCACAAAACATCATAATCAAGAAGAAAGTTGTC ACACAGCAGCTTCACACCAGAGTCTTCTAGAATGTTCTCTGAAACGTTTAGGCAACTCAG GTTCTGATTGTTCCTGAGGATGTCAGCCAGGTCCTAGCAGCCTCCAGTGATGAGACAGGC TCTCACCCTTAGTGACACAAGTGCACTGTCTGAGCCATACACTCGCCGGCTGCTTCTCCA TGTCCTTGTCATGCAGCTCCGACTCCTGTTTGGTGACATCCCATCCCATCCCCTCTAAGC TGTCAGTGCTAAATAGTTTTGCAGGTTGGGATGGGATCTCCTCTGTGGGAGCTGAGGGAC TGGGCTGCTCTCTGGAGATCAGCCCAGCTAGGCTTGCTGTCTTCAGTTGCTTCACATCTT GAGAGCAGAAGTAGAAGATGTGGGAGAATTTGCTCTGAAACGCCAGGCCTTCTGACCAGA CAGGCGTTCAATTTTTCAACATAATAGTCTTGCCGATTCCAGCCCACGTGTGGCTTCTTT TCAGTTCCCTTTGGTACAAGAAGGTTCTCAAGATGATTATATTCATCCTCAAAAAAATTC TGAAGGCTGTTATGGAACTTTCTGGAAAAATCATGGGTCAGCTTCTTTAAATGAGCTTGA TATATCATTGGGTATGGAGCAATCTCTCCTGTTGCCCTCTCTCTCTCTTTTAATTTTTTA AAAAGTATATGAGTACACACTGTAACTGTACAGATAGTTGTGAGCCTTCATCTGGTTGTT GGGAATTGACTTTAGGACCTCTGCTCACTCCAGTCAGCCTCCTTGCTCAGGCCCAAAGAT TTATTATTATAAATAAGTACTCTATAATCTGTCTTCAGACAGCACCAGAAGAGGGCATCA GATCTCGTTACAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCT TCAGAAGAGCAGTGAGTGCTCTTACTTGCTGAGCCATCTC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Tpmt (ENSMUSG00000021376)
Transcript ID	ENSMUST00000110118

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 206 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information