MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Slco5a1 (ENSMUSG00000025938)

Cross Reference

EMBL	AC118477, AC126044
GO	GO:0003674, GO:0005215, GO:0005575, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name	Slco5a1-003
OTTP	OTTMUSP00000067419
OTTT	OTTMUST00000053230
UCSC	uc007aii.1
UniParc	UPI00001EDCA6
Uniprot/SPTREMBL	A0A087WNX4
Vega_transcript	OTTMUST00000053230, Slco5a1-003

Vega_translation

178728, OTTMUSP00000067419

Definition

protein_id:ENSMUSP00000139533
translation:

MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLAL
GCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQER
RCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIG
NLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLC
QNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDN
ASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIA
MFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVR
DLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIV
PSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYT
TGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVSRRP
TLFFYCEASIMRQVMGPQAPMMTSVSLVHEAPNSPPGTSEKPLPRQKIVQGYYFCQMC

Chromosome

Length
Position(start - end)

109393
12881101 - 12990495

Orient to Chromosome

minus

Link

Location : (1:12881101-12990495)
/

Detail Map

name	Slco5a1 (ENSMUSG00000025938)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Slco5a1 note : solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000188454

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000115403

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000115402

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000136197

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000146763

name	Slco5a1 (ENSMUSG00000025938)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000147606

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14821.2 RefSeq_mRNA_predicted:XM_011238380.1 RefSeq_mRNA_predicted:XM_011238381.1 RefSeq_peptide_predicted:XP_011236682.1 RefSeq_peptide_predicted:XP_011236683.1 Vega_transcript:OTTMUST00000053228 Vega_transcript:Slco5a1-001 Uniprot/SPTREMBL:E9PVD9 UCSC:uc007aif.1 EMBL:AC118477 EMBL:AC126044 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0005886 GO:GO:0006811 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Slco5a1-001 Vega_translation:178726 Vega_translation:OTTMUSP00000025298 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0006810 goslim_goa:GO:0008150 OTTP:OTTMUSP00000025298 OTTT:OTTMUST00000053228 UniParc:UPI0000F08887
definition	note : transcript_id=ENSMUST00000188454 protein_id : ENSMUSP00000140091 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEDGLQRRRCREFPLSTVSEQVGQPSKAEKYSRTTSCPAFSTQGEVHEETALQKGFPCTTQTYPGPFSEAVSSSADPGQDESPDAAL

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS14821.2 RefSeq_peptide:NP_766429 RefSeq_mRNA:NM_172841.2 Uniprot/SPTREMBL:E9PVD9 UCSC:uc007aif.1 EMBL:AC118477 EMBL:AC126044 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0005886 GO:GO:0006811 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Slco5a1-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0006810 goslim_goa:GO:0008150 UniParc:UPI0000F08887
definition	note : transcript_id=ENSMUST00000115403 protein_id : ENSMUSP00000111062 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFIVTFITACAQPSAIIVTLRSVEDEERPFALGMQFVLLRTLAYIPTPIYFGAVIDTTCMLWQQECGVQGSCWEYNVTSFRFVYFGLAAGLKFVGFIFIFLAWYSIKYKEDGLQRRRCREFPLSTVSEQVGQPSKAEKYSRTTSCPAFSTQGEVHEETALQKGFPCTTQTYPGPFSEAVSSSADPGQDESPDAAL

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000053229 Vega_transcript:Slco5a1-002 Uniprot/SPTREMBL:E9PVE0 UCSC:uc007aif.1 EMBL:AC118477 EMBL:AC126044 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0005886 GO:GO:0006811 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Slco5a1-002 Vega_translation:178727 Vega_translation:OTTMUSP00000025299 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0006810 goslim_goa:GO:0008150 OTTP:OTTMUSP00000025299 OTTT:OTTMUST00000053229 UniParc:UPI0000F22040
definition	note : transcript_id=ENSMUST00000115402 protein_id : ENSMUSP00000111061 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVRNYTECTCVQSRQVITPPTVGQRSQLRVVIVKTYLNENGYAVSGKCKRTCNTLIPFLVFLFIVTFITACAQPSAIIVTLSIHSYSNLLWSCD

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000053230 Vega_transcript:Slco5a1-003 Uniprot/SPTREMBL:A0A087WNX4 UCSC:uc007aii.1 EMBL:AC118477 EMBL:AC126044 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0005886 GO:GO:0006811 GO:GO:0008150 GO:GO:0016021 MGI_trans_name:Slco5a1-003 Vega_translation:178728 Vega_translation:OTTMUSP00000067419 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0006810 goslim_goa:GO:0008150 OTTP:OTTMUSP00000067419 OTTT:OTTMUST00000053230 UniParc:UPI00001EDCA6
definition	note : transcript_id=ENSMUST00000136197 protein_id : ENSMUSP00000139533 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVSRRPTLFFYCEASIMRQVMGPQAPMMTSVSLVHEAPNSPPGTSEKPLPRQKIVQGYYFCQMC

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000053231 Vega_transcript:Slco5a1-004 Uniprot/SPTREMBL:A0A087WP15 UCSC:uc007aih.1 EMBL:AC118477 EMBL:AC126044 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0006810 GO:GO:0008150 GO:GO:0016020 MGI_trans_name:Slco5a1-004 Vega_translation:178729 Vega_translation:OTTMUSP00000067420 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 OTTP:OTTMUSP00000067420 OTTT:OTTMUST00000053231 UniParc:UPI00015DF5F9
definition	note : transcript_id=ENSMUST00000146763 protein_id : ENSMUSP00000139586 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWCHHCPQCRCWYCPGRLHHKKTEAWCKRICKASHDLQRGFSAVLLHPVHCWL

name	Slco5a1 (ENSMUSG00000025938) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000053232 Vega_transcript:Slco5a1-005 Uniprot/SPTREMBL:Q148W2 UCSC:uc007aig.1 EMBL:AC118477 EMBL:AC126044 EMBL:BC117943 GO:GO:0003674 GO:GO:0005215 GO:GO:0005575 GO:GO:0006810 GO:GO:0008150 GO:GO:0016020 MGI_trans_name:Slco5a1-005 Vega_translation:178730 Vega_translation:OTTMUSP00000067421 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0006810 goslim_goa:GO:0008150 protein_id:AAI17944.1 OTTP:OTTMUSP00000067421 OTTT:OTTMUST00000053232 UniParc:UPI0000DA6CE9
definition	note : transcript_id=ENSMUST00000147606 protein_id : ENSMUSP00000140658 translation : MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLALGCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLCQNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDNASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTDLL

name
type	misc_feature
link
xref
definition	note : contig AC126044.4 87008..213412(1)

name
type	misc_feature
link
xref
definition	note : contig AC118477.14 1..130808(-1)

name	Slco5a1 (ENSMUSG00000025938)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000053233 Vega_transcript:OTTMUST00000053233 MGI_trans_name:Slco5a1-006 OTTT:OTTMUST00000053233
definition	note : processed_transcript note : transcript_id=ENSMUST00000133201

name	Slco5a1 (ENSMUSG00000025938)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000123446 Vega_transcript:OTTMUST00000123446 MGI_trans_name:Slco5a1-007 OTTT:OTTMUST00000123446
definition	note : processed_transcript note : transcript_id=ENSMUST00000191566

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Slco5a1 (ENSMUSG00000025938)
Transcript ID	ENSMUST00000136197

Reports
substitution
cSNPs	10
Insertion	66
Deletion	100
SNPs	+1kb 12991289(c.-794G>A), 12991420(c.-925T>C), 12991539(c.-1044A>G), 12991554(c.-1059C>T), 12991782(c.-1287C>G), 12991807(c.-1312T>G), 12991818(c.-1323G>A), 12991956(c.-1461C>T), 12991979(c.-1484A>G), 12992044(c.-1549C>G), 12992621(c.-2126T>C), 12992771(c.-2276C>T), 12992821(c.-2326G>A), 12993212(c.-2717C>T), 12994250(c.-3755C>G), 12994298(c.-3803C>T), 12994312(c.-3817A>G), 12994657(c.-4162C>T), 12994727(c.-4232C>G), 12994741(c.-4246C>T), 12994770(c.-4275T>A), 12994989(c.-4494A>G), 12994996(c.-4501G>A), 12995015(c.-4520A>T), 12995145(c.-4650A>G), 12995251(c.-4756T>C), 12995319(c.-4824C>T), 12995405(c.-4910G>A), 12995422(c.-4927T>C), 12995663(c.-5168T>G), 12995682(c.-5187G>C), 12995734(c.-5239G>T), 12995739(c.-5244T>A), 12995777(c.-5282G>C), 12995871(c.-5376A>T), 12995970(c.-5475T>C), 12996013(c.-5518G>A), 5'UTR 12990736(c.-241A>G), 12991097(c.-602C>T), CDS 12881282(c.1796G>A), 12881434(c.1644T>C), 12894603(c.1449C>T), 12989647(c.849G>A), 12989737(c.759C>T), 12989758(c.738A>G), 12989952(c.544C>T), 12990019(c.477C>T), 12990096(c.400T>C), 12990226(c.270C>A), 3'UTR 12878669(c.2432C>T), 12879344(c.1757C>T), 12879359(c.1742T>C), 12879628(c.1473C>T), 12879835(c.1266G>A), 12879878(c.1223G>A), 12879971(c.1130C>G), 12880085(c.1016T>C), 12880092(c.1009T>C), 12880119(c.982T>C), 12880131(c.970C>T), 12880238(c.863G>A), 12880381(c.720G>A), 12880453(c.648T>G), 12880892(c.209T>C), 12880905(c.196T>C), 12880988(c.113C>G), INTRON 12881797(c.1626-345C>G), 12881919(c.1626-467A>G), 12881928(c.1626-476T>C), 12882165(c.1626-713G>A), 12882352(c.1626-900A>G), 12882381(c.1626-929C>G), 12882438(c.1626-986A>C), 12882483(c.1626-1031A>C), 12882515(c.1626-1063C>T), 12882788(c.1626-1336C>T), 12882842(c.1626-1390C>T), 12882851(c.1626-1399G>A), 12882857(c.1626-1405C>T), 12883074(c.1626-1622A>T), 12883324(c.1626-1872A>G), 12883362(c.1626-1910A>C), 12883598(c.1626-2146C>G), 12883639(c.1626-2187T>A), 12883682(c.1626-2230T>C), 12883781(c.1626-2329G>A), 12883950(c.1626-2498T>C), 12884034(c.1626-2582G>A), 12884035(c.1626-2583T>C), 12884055(c.1626-2603C>A), 12884102(c.1626-2650G>A), 12884155(c.1626-2703G>A), 12884206(c.1626-2754T>C), 12884407(c.1626-2955A>G), 12884571(c.1626-3119T>C), 12884917(c.1626-3465A>T), 12885542(c.1626-4090A>G), 12886208(c.1626-4756A>G), 12886223(c.1626-4771A>G), 12886512(c.1626-5060A>G), 12886822(c.1626-5370C>G), 12887840(c.1626-6388C>T), 12888784(c.1625+5643C>T), 12889258(c.1625+5169A>G), 12889752(c.1625+4675C>T), 12889759(c.1625+4668C>T), 12890158(c.1625+4269C>T), 12890263(c.1625+4164T>C), 12890365(c.1625+4062G>A), 12891010(c.1625+3417C>T), 12891372(c.1625+3055T>C), 12892609(c.1625+1818T>C), 12893273(c.1625+1154G>A), 12893357(c.1625+1070C>T), 12893521(c.1625+906C>T), 12893563(c.1625+864C>T), 12894100(c.1625+327C>T), 12894139(c.1625+288C>G), 12894389(c.1625+38A>G), 12894671(c.1427-46C>A), 12894684(c.1427-59A>C), 12894720(c.1427-95G>C), 12894759(c.1427-134T>G), 12894810(c.1427-185T>C), 12894989(c.1427-364C>T), 12895367(c.1427-742T>C), 12895602(c.1427-977C>T), 12895768(c.1427-1143G>A), 12896052(c.1427-1427T>C), 12896122(c.1427-1497A>G), 12896459(c.1427-1834G>A), 12896552(c.1427-1927T>C), 12896740(c.1427-2115T>A), 12896762(c.1427-2137C>A), 12896880(c.1427-2255T>G), 12896919(c.1427-2294T>C), 12896958(c.1427-2333C>T), 12896984(c.1427-2359T>C), 12896988(c.1427-2363T>G), 12897103(c.1427-2478A>T), 12897133(c.1427-2508A>T), 12897137(c.1427-2512C>T), 12897168(c.1427-2543C>G), 12897276(c.1427-2651C>T), 12897391(c.1427-2766C>T), 12897534(c.1427-2909G>A), 12897553(c.1427-2928C>T), 12897683(c.1427-3058C>T), 12897927(c.1427-3302A>G), 12898033(c.1427-3408A>G), 12898050(c.1427-3425G>T), 12898051(c.1427-3426A>G), 12898067(c.1427-3442A>G), 12898110(c.1427-3485G>A), 12898156(c.1427-3531A>G), 12898165(c.1427-3540C>T), 12898188(c.1427-3563T>G), 12898442(c.1427-3817G>A), 12898502(c.1427-3877T>A), 12898543(c.1427-3918A>G), 12898570(c.1427-3945T>G), 12898575(c.1427-3950T>G), 12901659(c.1427-7034C>T), 12901663(c.1427-7038C>T), 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12989086(c.916+494T>C), 12989155(c.916+425G>A), 12989311(c.916+269C>T), 12989321(c.916+259T>C), 12989332(c.916+248T>G), 12989438(c.916+142A>G), 12989518(c.916+62T>A), 12989540(c.916+40T>C), 12989543(c.916+37C>T), -1kb 12873623(c.7478G>T), 12873715(c.7386G>A), 12873725(c.7376G>A), 12873930(c.7171T>C), 12873948(c.7153C>T), 12873959(c.7142T>C), 12874082(c.7019G>A), 12874097(c.7004T>A), 12874119(c.6982A>G), 12874136(c.6965T>C), 12874158(c.6943C>G), 12874192(c.6909G>A), 12874235(c.6866G>C), 12874499(c.6602A>C), 12874501(c.6600A>C), 12874513(c.6588T>G), 12874526(c.6575T>C), 12874606(c.6495G>C), 12874636(c.6465A>T), 12874672(c.6429C>A), 12874689(c.6412T>C), 12874754(c.6347C>T), 12874766(c.6335C>T), 12874797(c.6304T>A), 12874811(c.6290C>T), 12874869(c.6232A>G), 12874915(c.6186T>C), 12875135(c.5966G>T), 12875186(c.5915C>A), 12875213(c.5888T>G), 12875222(c.5879T>C), 12875400(c.5701G>A), 12875445(c.5656T>G), 12875460(c.5641G>A), 12875797(c.5304G>T), 12875890(c.5211C>T), 12876097(c.5004A>G), 12876128(c.4973A>G), 12876135(c.4966T>C), 12876136(c.4965G>A), 12876187(c.4914A>C), 12876270(c.4831T>C), 12876371(c.4730T>C), 12876467(c.4634T>G), 12876625(c.4476T>C), 12876738(c.4363T>C), 12876867(c.4234A>G), 12877038(c.4063T>C), 12877125(c.3976T>C), 12877164(c.3937C>T), 12877219(c.3882A>T), 12877223(c.3878T>C), 12877247(c.3854C>T), 12877368(c.3733T>C), 12877418(c.3683A>G), 12877519(c.3582C>T), 12877521(c.3580G>A), 12877620(c.3481C>T), 12877757(c.3344A>C), 12877784(c.3317T>C), 12877817(c.3284A>T), 12877831(c.3270T>A), 12877839(c.3262A>G), 12877845(c.3256A>T), 12877851(c.3250A>T), 12877853(c.3248A>G), 12877927(c.3174C>T), 12878364(c.*2737G>T),
Insertions	+1kb 12991534 (c.-1040_-1039insGAAT), 12994752 (c.-4258_-4257insGTGTG), 5'UTR 12990991 (c.-497_-496insTT), CDS 3'UTR 12878624 (c.2476_2477insAAGCAGA), 12880076 (c.1024_1025insT), INTRON 12881656 (c.1626-205dupT), 12883189 (c.1626-1742_1626-1738dupATCTT), 12884615 (c.1626-3164_1626-3163insCCACCA), 12884701 (c.1626-3250_1626-3249insGGGT), 12884718 (c.1626-3267dupG), 12884722 (c.1626-3271dupG), 12894742 (c.1427-118_1427-117insGATTA), 12897606 (c.1427-2982_1427-2981insT), 12902141 (c.1427-7519_1427-7517dupGTT), 12908996 (c.1426+12041_1426+12042insA), 12909074 (c.1426+11963_1426+11964insCACTGACAC), 12909247 (c.1426+11790dupT), 12911206 (c.1426+9831_1426+9832insT), 12911241 (c.1426+9796dupA), 12911245 (c.1426+9792dupA), 12922010 (c.1262-809_1262-808insTTT), 12926342 (c.1262-5141dupT), 12926473 (c.1262-5272_1262-5271insT), 12928540 (c.1262-7339_1262-7338insCT), 12929192 (c.1262-7991_1262-7990insGAC), 12929230 (c.1262-8030_1262-8029dupTG), 12929235 (c.1262-8034_1262-8033insTG), 12929974 (c.1262-8773_1262-8772insATTAA), 12930487 (c.1261+8501dupT), 12931114 (c.1261+7874_1261+7875insCCGTGAGCC), 12931642 (c.1261+7346_1261+7347insGGA), 12931730 (c.1261+7258_1261+7259insC), 12932764 (c.1261+6224dupT), 12937609 (c.1261+1379_1261+1380insGC), 12937739 (c.1261+1249_1261+1250insAGTAGC), 12943296 (c.1049+680_1049+683dupAAAA), 12943481 (c.1049+496_1049+498dupTGT), 12948086 (c.917-3975_917-3974insGTCT), 12948500 (c.917-4391_917-4389dupACA), 12950898 (c.917-6788_917-6787dupAA), 12951889 (c.917-7778dupT), 12955655 (c.917-11544_917-11543insTA), 12959696 (c.917-15587_917-15585dupGGG), 12961622 (c.917-17511_917-17510insCA), 12962180 (c.917-18069dupA), 12965507 (c.917-21396dupC), 12968075 (c.916+21504dupT), 12970769 (c.916+18810dupG), 12972944 (c.916+16635_916+16636insT), 12972957 (c.916+16622_916+16623insTT), 12974454 (c.916+15125_916+15126insAGAA), 12975615 (c.916+13964_916+13965insG), 12976007 (c.916+13572_916+13573insAT), 12977063 (c.916+12516_916+12517insG), 12977110 (c.916+12469_916+12470insATAGGAT), 12979650 (c.916+9929dupT), 12981979 (c.916+7600_916+7601insGTGTGG), 12983842 (c.916+5737dupA), 12984998 (c.916+4581_916+4582insAC), 12985198 (c.916+4381_916+4382insC), 12985818 (c.916+3761_916+3762insG), 12986483 (c.916+3096_916+3097insA), 12988885 (c.916+694dupA), -1kb 12874000 (c.7100_7101insCTCC), 12874196 (c.6903_6904dupAG), 12875614 (c.5486_5487insGACAGTC),
Deletions	+1kb 12991366 (c.-872delA), 5'UTR CDS 3'UTR 12879091 (c.2003_2009delCAGAGGG), 12879400 (c.1699_1700delAC), 12880561 (c.539delT), INTRON 12882178 (c.1626-727delT), 12883646 (c.1626-2200_1626-2195delGCTGCC), 12883969 (c.1626-2522_1626-2518delTTTTA), 12884189 (c.1626-2743_1626-2738delTTATTT), 12887319 (c.1626-5869_1626-5868delTG), 12890982 (c.1625+3444delT), 12891668 (c.1625+2758delA), 12892253 (c.1625+2173delT), 12895750 (c.1427-1129_1427-1126delGTGT), 12898554 (c.1427-3931_1427-3930delTT), 12900407 (c.1427-5788_1427-5783delTTTTTT), 12901682 (c.1427-7058delT), 12902278 (c.1427-7654delT), 12903624 (c.1427-9000delG), 12904522 (c.1427-9898delT), 12906829 (c.1427-12206_1427-12205delTG), 12908377 (c.1426+12658_1426+12660delACC), 12908713 (c.1426+12322_1426+12324delGGT), 12908764 (c.1426+12273delC), 12908774 (c.1426+12261_1426+12263delTTT), 12908780 (c.1426+12255_1426+12257delTTT), 12909886 (c.1426+11151delA), 12909922 (c.1426+11115delT), 12909957 (c.1426+11079_1426+11080delTA), 12909966 (c.1426+11070_1426+11071delAT), 12910349 (c.1426+10688delG), 12910455 (c.1426+10579_1426+10582delTGGT), 12913156 (c.1426+7881delA), 12913432 (c.1426+7602_1426+7605delGACA), 12915138 (c.1426+5899delA), 12916872 (c.1426+4158_1426+4165delATATATAT), 12917385 (c.1426+3650_1426+3652delTTC), 12918550 (c.1426+2487delG), 12923188 (c.1262-1990_1262-1987delAGTG), 12926065 (c.1262-4865_1262-4864delTA), 12926997 (c.1262-5797_1262-5796delTT), 12928561 (c.1262-7361_1262-7360delTT), 12930214 (c.1261+8773_1261+8774delAT), 12931515 (c.1261+7472_1261+7473delTT), 12932901 (c.1261+6080_1261+6087delTCTGAGCT), 12933312 (c.1261+5669_1261+5676delTGGTGGTG), 12935555 (c.1261+3432_1261+3433delTG), 12935739 (c.1261+3244_1261+3249delGTGTGT), 12935908 (c.1261+3072_1261+3080delCCCAGGTGC), 12937277 (c.1261+1709_1261+1711delTTT), 12940319 (c.1050-1126_1050-1120delACCTAAC), 12941712 (c.1049+2267delC), 12941721 (c.1049+2258delG), 12941949 (c.1049+2030delG), 12942322 (c.1049+1657delC), 12944115 (c.917-5_917-4delTC), 12946515 (c.917-2404delC), 12946682 (c.917-2571delA), 12949374 (c.917-5263delG), 12950722 (c.917-6611delT), 12951205 (c.917-7094delG), 12951567 (c.917-7459_917-7456delTAGA), 12953404 (c.917-9293delA), 12954653 (c.917-10543_917-10542delAG), 12957436 (c.917-13325delT), 12960079 (c.917-15968delT), 12960668 (c.917-16558_917-16557delTG), 12961309 (c.917-17199_917-17198delGA), 12962013 (c.917-17910_917-17902delTTTTTTTTT), 12966994 (c.916+22583_916+22585delCCT), 12969132 (c.916+20444_916+20447delGTAT), 12970215 (c.916+19359_916+19364delCTTGTT), 12970410 (c.916+19166_916+19169delAGAG), 12971741 (c.916+17838delA), 12972205 (c.916+17371_916+17374delTTTT), 12972943 (c.916+16634_916+16636delTAG), 12972957 (c.916+16620_916+16622delATC), 12973999 (c.916+15580delT), 12975728 (c.916+13849_916+13851delTCT), 12978158 (c.916+11417_916+11421delCCAAA), 12978852 (c.916+10727delG), 12978949 (c.916+10630delG), 12979117 (c.916+10462delA), 12982663 (c.916+6916delC), 12983015 (c.916+6562_916+6564delCCC), 12983312 (c.916+6263_916+6267delCCGCC), 12984859 (c.916+4712_916+4720delATTGTCTTG), 12986164 (c.916+3415delT), 12987458 (c.916+2121delT), 12987518 (c.916+2061delT), 12987523 (c.916+2056delT), 12988628 (c.916+944_916+951delGTGTGTAT), -1kb 12873883 (c.7216_7217delGG), 12874362 (c.6737_6738delGT), 12875069 (c.6026_6031delTTAGGG), 12876114 (c.4983_4986delTAAT), 12876468 (c.4632delT), 12876502 (c.4593_4598delTAGTAG), 12877658 (c.3440_3442delCAG), 12878568 (c.2532delG), 12878573 (c.2526_*2527delAG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	9
non-synonymous num	1
synonymous substitutions	12881434 (p.Pro548Pro), 12894603 (p.Ala483Ala), 12989647 (p.Pro283Pro), 12989737 (p.Pro253Pro), 12989758 (p.Thr246Thr), 12989952 (p.Leu182Leu), 12990019 (p.Ile159Ile), 12990096 (p.Leu134Leu), 12990226 (p.Gly90Gly),
non-synonymous substitutions	12881282 (p.Arg599His),
B6 transcript (ENSMUST00000136197)	MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLAL GCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQER RCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIG NLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLC QNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDN ASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIA MFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVR DLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIV PSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYT TGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVSRRP TLFFYCEASIMRQVMGPQAPMMTSVSLVHEAPNSPPGTSEKPLPRQKIVQGYYFCQMC*
MSMv4 transcript	MDEGDAQSRAQQQLEAPSSVGAVQEKCESESFRSKSLPVLHSASCRQNFSAGNADGKLAL GCNEAPGRQETHLGRNLIVPSPSAPSTSAGTTTELMDCNHRMDPSKTVSVSSTLATLQER RCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIG NLVVVVFVSYFGGRGRRPLWLAVGGLLIAIGAALFALPHFISPPYQIQELNASASNDGLC QNGNSTAILEPPPCPKDSGGNSHWIYVALFVCAQVLIGMGSTPIYTLGPTYLDDNVKKDN ASLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQSDPRFIGNWWSGFLLCAIA MFLVIFPMFTFPKKLPPRHKKKKKFSADVVIDDDIIKEKSNTSEQMNKKVSPMGFGKNVR DLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIV PSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYT TGPSLTMPHRNLTGSCNVNCGCKIHEYEPVCGSDGITYFNPCLAGCINSGNLTTGVSRHP TLFFYCEASIMRQVMGPQAPMMTSVSLVHEAPNSPPGTSEKPLPRQKIVQGYYFCQMC*
homology	99.85 (659 / 659)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Slco5a1 (ENSMUSG00000025938)
Transcript ID	ENSMUST00000136197


..........CTTTTTTCTTTTCGCAGCAGCATCACAAAAGCTCAGAACGAAACCCAACG
CAGCAGAACCCCAATGCCTCCCATCTGGTGCACTTCGCCGCGGGGGCAGGAGGAGTATAG
GGTTCCCCAAGATTAGGGATGGGGTTTACAGCGGAGGCGCACCTGTGTTAGCGCTCGCTG
AATTCAAACTAAGCGCTGGCTCGCACAAAGTGAACTCGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTTATACTTCAGGCCTTCGCACACCTCACGCTCTCAGGG
TGTGCTTGGCAAATAGCACACCTCCGGACCGGCGTGCCGGTGTTGAGCCGTTTCGGTGGG
CTCGCCGCGCACGCTGTGCCAGCTTGCCAGCGTCTCTTTGTTTGGTGTGGCTTCACTCAA
CCATTTGCAAAGCAAATTGATTTTCGGTTTCGCTCAACCTTGCGCTCTGGGACTTAACGT
GGGCCACAGCCTCGAATGCCCTCGTTACTTGTAATTGAATATAGTTCTTTCCGGCAAGGG
GCTATTTTTAGTGTAGAGAATAACCACGCAAGCATGTTGATCCCCTCCCCCTACGCGCTG
TCTTTGACTTTAAGTAGGTGTTTGATGGAGCGGACGCATTCACATCTCGTCGCGCACACG
TGCCAGTGTACAAGTGTGCACACATATTTCTACACGTAGTTTTCTTTCTACCGCTTAAAA
ATGTACTTTAAAATTTGAGACCAGGAATGTATTGTGTGCTTGTAAAAGGAAAAAAAAAAC
TTTCCTTTGTTCTTCTGGGAATCTTCTATTTTGAGTCATGGAGTAGGAGTACCAGAAGGT
TGCTATTAGTTCACTCAAATAAAAGACACTGCCTTCTGAGTCAGAGCTGCCAGGCTGATA
ATTATTAACATATAAAAGCAAACGCACTGTTTAAGGCAAAAGGGGCGGGGCGGGGGCAGG
CCCGCCGCAGACAATGAGCGAGAGTCTTGGCGGACCGCCTGCTGCTCATT
GTTCCGGGACTTGAGGCTGCAGTCTCTGCAGGTCCCTCTTGCACGGTTCAGCTCCTGGCTAGCACCTCGGTCCCTCTGGGGTCCACGAGGTTACTTAGCACTAGTCACCGGACCCCGGGTTGCCAGCCCCAAGTGCATCCGTCCCTCTGACCATCAATTCTCTGCTTTACAGGTCGGCAGCTTCACGACCCTGTGTGTCACAAGCCTTGCGGTGGGCACCGAACACCCCTGGAGCCACAAAGTGGGATGTTGTTCGGACAGTTGCGCTAAGAGACCCCACACTGGGCCCAGGTCGCTCTAGCTTCTGGCCACCGTCTGAGAGGCGGCGGCGGAGGGGATGAGCACCGGACGCGCAAAGCGCCTACCGCGAGCTATCCCTGAGAGTGGACACCAAGCAGGGCTCCTCGAAGGACCGCGTGGACCTTTACCTCCCCCGGTACAAGGTGGCTTCTTGTTGTGCCTCGGGTCAGGATGCTCTGGGCACCTCCCTGCTGCTGAGATGTTTTGCTTCCAGGCTCTGCCATCCCCAGCCCGGGTCTCAGGAGGAGACGACTGAGTGGGCCGGGCATCAGCCCCTCGTTCAGGTGGATGAAAAGTGCCGGAGGCCTTATATGGAATCAGCGATCACATTTTAAGAGCCATGGACGAAGGGGATGCGCAGTCTCGGGCCCAACAGCAGCTAGAGGCACCGTCTTCGGTTGGAGCTGTCCAAGAGAAGTGCGAGTCAGAGTCCTTCAGGTCTAAGAGTTTACCGGTCCTGCACAGCGCCTCCTGCCGGCAGAATTTCAGTGCTGGGAATGCAGATGGCAAACTGGCCTTGGGTTGCAATGAAGCTCCAGGTCGCCAGGAGACGCATCTAGGACGGAACTTGATAGTCCCCAGCCCTTCTGCTCCATCCACTTCGGCAGGAACTACAACGGAACTCATGGACTGTAACCACAGGATGGACCCCAGCAAAACTGTGTCAGTATCTTCCACTTTGGCCACACTCCAGGAGAGAAGGTGTCTCTACGTGGTCCTTACGGATTCTCGCTGCTTCCTAGTGTGCATGTGTTTTCTGACTTTCATCCAGGCGTTAATGGTCTCTGGGTACCTGAGCAGTGTCATCACCACCATTGAAAGGCGCTATAGCTTGAAGAGTTCTGAGTCAGGGCTGCTGGTCAGCTGCTTTGATATAGGAAACTTGGTGGTGGTGGTGTTCGTCAGCTACTTTGGTGGCCGTGGGCGAAGGCCCCTATGGCTGGCAGTGGGTGGACTTCTTATTGCCATCGGGGCTGCGCTCTTCGCTTTACCTCACTTTATCTCACCCCCCTATCAAATCCAAGAGTTGAACGCTTCGGCCTCCAACGATGGCCTTTGTCAGAATGGCAACTCCACGGCCATCTTGGAGCCTCCTCCTTGTCCCAAGGACTCGGGAGGAAATAGTCACTGGATCTACGTGGCTTTATTCGTTTGTGCACAGGTTCTCATTGGAATGGGCTCTACACCAATTTACACCCTGGGACCAACCTATTTAGATGACAACGTCAAGAAAGACAATGCATCCTTGTACCTAG
GTAAGACTTGGAATTCTCAGGCATG..........TCCCTTCCCCTCTCTCTCTCTCCAG
CCATCATGTATGTCATGGGAGCACTCGGCCCTGCAGTAGGATACTTACTAGGTGGGCTACTCATTGGCTTTTATGTGGATCCCAGAAATCCTGTTCACCTTGACCAGAGTGACCCTCGTTTCATCGGAAACTG
GTGAGTGTTTTCCACATTTTCTATT..........CAACTGACATTTCCCAATTTTTTAG
GTGGAGTGGATTCCTTCTTTGTGCCATTGCAATGTTTCTTGTGATATTCCCAATGTTTACTTTTCCAAAAAAGCTTCCACCTCGACACAAGAAAAAGAAAAAATTTTCTGCCGATGTCGTTATCGACGATGACATCATCAAGGAGAAATCAAACACAAGTGAACAAATGAACAAAAAAGTTTCTCCAATGGGCTTTGGAAAGAATGTCAGAG
GTAAAGTATATCTCTTAAATGAATC..........ATGTATTACTTCCTTCATTTTGTAG
ACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACATGACATTCCTTTTTGTGAGTCTGTCATACACAGCTGAGAGTGCCATTGTCACCGCTTTCATTACCTTCATCCCCAAGTTCATCGAGTCACAGTTTGGTATCCCAGCTTCCAATGCCAGCATCTACACTG
GTAAGGCACTGCCGCTAGGGCTGCT..........AACCCTCTTTTCCTCTTCTTCCAAG
GTGTCATCATTGTCCCCAGTGCTGGTGTTGGTATTGTCCTGGGAGGCTACATCATAAAAAAACTGAAGCTTGGTGCAAGAGAATCTGCAAAGCTAGCCATGATCTGCAGCGGGGTTTCTCTGCTGTGCTTCTCCACCCTGTTCATTGTTGGCTGTGAAAGCATTAATCTAGGAGGCATAAACATCCCTTACACAACGGG
GTAAGTGCCTCTTAGGGGCATCATC..........CTCCCTCTCTCTCTCTCTCTCTCAG
ACCTTCTCTGACCATGCCCCATAGGAATCTGACAGGAAGCTGTAATGTTAATTGTGGCTGTAAAATACACGAATATGAGCCAGTCTGTGGATCAGATGGGATCACATACTTCAACCCATGTCTGGCTGGCTGCATTAACAGTGGTAATCTTACCACTGGGGTGAGTAGACACCCTACGTTGTTCTTCTATTGTGAGGCCAGCATCATGAGACAGGTGATGGGACCCCAGGCACCCATGATGACTTCAGTTTCCCTTGTTCATGAGGCTCCAAATAGCCCTCCAGGTACCTCTGAAAAACCTCTCCCGAGACAAAAAATTGTGCAGGGCTATTACTTTTGTCAAATGTGTTAGTAGGAGCTAGGTGTAGAGTTCTGGTCCTCATTAGCTGGATTCTGTTTTACATTCATGCCAACTCAGGGAAACTTGATAAGGTTGGACTCCAGGCTTCCCATTTCTTCCTCTGGCAGGGTCTTTTTAATGAATCTGAAGGTCAAGGTTATCACTGTTGCCACTGAGAAAAGAGACTAGAGGCTGAGGAGGCTGGTCCGCTAAGTGGTGGCTGTGAAGATGGGCAATGGCCATTATTCATAAGCCCGTCAGTTAACTTTCTCCCCTACCCCTTAACTTCCAGAGTAAAGATATTTCTGTCAGCTGAAGAATAGTCTATTTTGAGAATTTTCTTCCCTGTGAATTATAAATAGGCTTTAATACTGTGGGGGAAGGTTTTTTATATTCTACTCTATTCTTTACTGAGCCCAATTTGGCTGTTAGCATTAGAACAGATAGGAGGTGACTGCCTTAATTTAAAGGTTAAAATGCATTTGCTTCTTCTGTGCCTATCTAGAGACTATACCACTGACCGAGAGTTTAGGGGTGCCACTTTTTTTTTTCTCAGTTTGAAACCAGAGGGCAACATGGATATTACTATTGCTGGTTCCCAATGACATAGCTGGCAAGCTCTGGAGATTGACCTATTGAGGTCATGAGATCATTTCTTTGCAGTGAAGCCCCTGTTGCATGGCATTGAATGAGACCTCGTGGACCCATTGTTATATTATTAAGGACTGAACATCCTTAATGGCCTAAATGGCTAAATACCCCGTGCCCAACCTGCTCTTACCACTGTTTTAAGCAGGCACCATGAGAACTAGTTCAGTTGATTTCCATTTAGTAAAAAGTAACATGATAGGCAGAGGATAAATTGGCCAGTTTAATATTTCTCATCTTGTTTGGTAACATCAAGTAACATCAAGAAGAGTTCCTGACCTTTGTGTCTTGCTCAGTAGACACAATGTGTGATTACTGGAGAAGACGTGGTCTTCTTTACCCCTCCGTCTTCAGTGCCCTCTAACAGCATGTCCTACATTAGTAGGGCCAGACATATGTTGGAGAAAATAGACAAGCAATGTGGAGCCCAGCAGGGTTTTCAGACAGCTGGAGTCTGCCAGAGTCCAGAGAACTGGGCCGAGGCTGGAGTACAGACTGAAGTGATGACGACTCCATCCCTTCACCTGAAGGTCACCAGCTTGCTGAGGGGACTGAAAGGGGGGTAAACTGGAATAGCCAACGGAACATCCCTCATCACTGTACTGAAACCAGCATCCCTAGGCCAGCCCATCTGCACACCGGAAGCCATCATGTGTGTGTTAGGAGTTTAATAGATGCTTATTTTAGGACTCACTATGTGCTCAAACGTGTGTTAGGCACTCTGGTGAGCACACATAAAAATCAAGCTGGATTCTGTTTTCAGGGCCTCGCTAACTGGGGAGTCTACAAGTTCAACAGCAATCAAAGCTGTGTGTATTTGTGACCCCAAATGAGCATGTAGCATGTCACAGAATTGAACTTTGAAGCTTCTTAGGGAAGTTTAGGATTAAACAGTCTAACTAGCAGGTTTTGATATTATCAAGGCAATCGTTGACCCATTAGTGCTGTTACCAAAGTATTTTGTGTGAATTATTAAACATTCTTTAAAATCCTATAGTTATTTTAAAGCATTCTTACTTTGTTAATATTTCCATGCCAGGCTTTATTCTTGACTGGCCTATAACTTATCTTTATTTGCTACTCAGGTCCGAAATTACACAGAGTGCACCTGTGTCCAAAGTCGACAAGTGATCACCCCGCCCACAGTGGGGCAGCGCAGCCAGCTCCGAGTGGTCATCGTCAAAACCTATCTCAATGAGAACGGCTATGCTGTGTCTGGGAAGTGCAAACGCACCTGCAATACCCTCATTCCCTTCCTGGTCTTCCTTTTCATAGTTACCTTCATCACAGCATGTGCCCAACCATCAGCCATTATAGTGACTCTCAGGTGAGAACAGCTCCAGGCAGTGCTTGAGAGAGCCTATTGCAGAGGGACAGAAGTCAAACAAAGCAGGGGATAGGAAGGAAAAGCTGCTGGCAGGCACCCATACGTGCTCTTCTGGGCTTAAGGGAGAAAAGCTTTTATATCAGGGAGAAAAGGATGGCTGAAATACTGTCTATTCTAGAATCTTTTTTCAGCTGGGTGCTATTCTTATTATTTATCAAACTTTCTTTCTAGTGCTTTTAGTGTCCGAAGTCTTTGTGCTATGAAGTCAGACATCATGAGTTGAAAGCCCTGTTTATGGGGCTGGAGAGATGGCTCACCGTTCAGAGCATTGAATGCTCCTCCAGAGGGGCTGGGTTTGATTTCCAGTACCCACACACATAATCTTCTGTAATTCCAGTTACATGTGACACCTTCTTGTCCCCATCACAGGCACCAGACATGCAAAAGGTGCACATATATACATGTGGGTATACACATAAATTTAAATAATCTTAAAGAAAAATTGAAAGAAGAGAGAAAGAGGAAAGAAGGAATGAAAGAAAG
AAAGAAAGAAAGAAAGAAAAGGAAAGGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAGAAA
AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGTCATCTCTATGTTAGCATC
AAGAAGCCAGACCCTCAGGCAGGGCAGGAATACTTGGGAAAAGTGACTAGATTATGAATA
TTGCAAAGGGTATTATTATCTCTGGCCTCATGGATAGTTAATATTGCACCTTTGGGATCA
GTGAAGAATTATGCTGGGCTTGCATTTCAAAATGCTGAGTTCATTAATTTTACTACTGTA
TGAAGTCCTGGAGCTGAATCAAGAACAGAATAGACTTGGAAATCTGAGCTTTCAGCTGGT
CAGGCTGTGCTTTCACTGCTGTGTTGCATATCCTGGAGGAGGTTTTGTTTTGGTTTGTTT
TTTTTTTTTTTTTCCTAGGAGAGGACTTGGAAGCTACTTTTGTTCTGTTCCATTGAGATC
AGTTTGTTATTCCTTGCATTAAAAGCTGTGCATACATGGCCAGGTAGGAAAGGACAGGGT
TGGAAGCCTGAAGAACACATTGTGGGTTAGAGGGAGGGAGCAGGGAGGTGGTGCAGAGAG
AGCCTGAGGAAGAGAGTCTACCCGTGTTCCCTTTGCCTGGTTCTTCCAACCCCACAATGC
TGGGCATTGGGCCCGGAAACATCATGTTCTCTGAGAGTGTTAGCCTGAATCATACACACT
GTATCACACACACTGTATCACGCTCACTGTATCACGCACACTGAATCACACACACTGTAT
CACACACACTGTATCACACACACTGTATCACGCACACTGGCTTCTTCCTCATTGGACCCC
GAGATAGGCAGTTCCTGAGTGGGAGAAAGCAGGGCATTCAAGGCTCCCTGGTCTACTCAC
TGTCAGCAGATCTTGATGGAGCAGCCCTGTATGCAGAGCTGGCAAATTGCTAGGAGACAC
AGATAATATGAGGATGACAGTAAGGACACCAGGCTCAGAA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTTTTTTCTTTTCGCAGCAGCATCACAAAAGCTCAGAACGAAACCCAACG CAGCAGAACCCCAATGCCTCCCATCTGGTGCACTTCGCCGCGGGGGCAGGAGGAGTATAG GGTTCCCCAAGATTAGGGATGGGGTTTACAGCGGAGGCGCACCTGTGTTAGCGCTCGCTG AATTCAAACTAAGCGCTGGCTCGCACAAAGTGAACTCGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTTATACTTCAGGCCTTCGCACACCTCACGCTCTCAGGG TGTGCTTGGCAAATAGCACACCTCCGGACCGGCGTGCCGGTGTTGAGCCGTTTCGGTGGG CTCGCCGCGCACGCTGTGCCAGCTTGCCAGCGTCTCTTTGTTTGGTGTGGCTTCACTCAA CCATTTGCAAAGCAAATTGATTTTCGGTTTCGCTCAACCTTGCGCTCTGGGACTTAACGT GGGCCACAGCCTCGAATGCCCTCGTTACTTGTAATTGAATATAGTTCTTTCCGGCAAGGG GCTATTTTTAGTGTAGAGAATAACCACGCAAGCATGTTGATCCCCTCCCCCTACGCGCTG TCTTTGACTTTAAGTAGGTGTTTGATGGAGCGGACGCATTCACATCTCGTCGCGCACACG TGCCAGTGTACAAGTGTGCACACATATTTCTACACGTAGTTTTCTTTCTACCGCTTAAAA ATGTACTTTAAAATTTGAGACCAGGAATGTATTGTGTGCTTGTAAAAGGAAAAAAAAAAC TTTCCTTTGTTCTTCTGGGAATCTTCTATTTTGAGTCATGGAGTAGGAGTACCAGAAGGT TGCTATTAGTTCACTCAAATAAAAGACACTGCCTTCTGAGTCAGAGCTGCCAGGCTGATA ATTATTAACATATAAAAGCAAACGCACTGTTTAAGGCAAAAGGGGCGGGGCGGGGGCAGG CCCGCCGCAGACAATGAGCGAGAGTCTTGGCGGACCGCCTGCTGCTCATT
1	EXON 1	12989580	12991135	-	1	1556	GTTCCGGGACTTGAGGCTGCAGTCTCTGCAGGTCCCTCTTGCACGGTTCAGCTCCTGGCT AGCACCTCGGTCCCTCTGGGGTCCACGAGGTTACTTAGCACTAGTCACCGGACCCCGGGT TGCCAGCCCCAAGTGCATCCGTCCCTCTGACCATCAATTCTCTGCTTTACAGGTCGGCAG CTTCACGACCCTGTGTGTCACAAGCCTTGCGGTGGGCACCGAACACCCCTGGAGCCACAA AGTGGGATGTTGTTCGGACAGTTGCGCTAAGAGACCCCACACTGGGCCCAGGTCGCTCTA GCTTCTGGCCACCGTCTGAGAGGCGGCGGCGGAGGGGATGAGCACCGGACGCGCAAAGCG CCTACCGCGAGCTATCCCTGAGAGTGGACACCAAGCAGGGCTCCTCGAAGGACCGCGTGG ACCTTTACCTCCCCCGGTACAAGGTGGCTTCTTGTTGTGCCTCGGGTCAGGATGCTCTGG GCACCTCCCTGCTGCTGAGATGTTTTGCTTCCAGGCTCTGCCATCCCCAGCCCGGGTCTC AGGAGGAGACGACTGAGTGGGCCGGGCATCAGCCCCTCGTTCAGGTGGATGAAAAGTGCC GGAGGCCTTATATGGAATCAGCGATCACATTTTAAGAGCCATGGACGAAGGGGATGCGCA GTCTCGGGCCCAACAGCAGCTAGAGGCACCGTCTTCGGTTGGAGCTGTCCAAGAGAAGTG CGAGTCAGAGTCCTTCAGGTCTAAGAGTTTACCGGTCCTGCACAGCGCCTCCTGCCGGCA GAATTTCAGTGCTGGGAATGCAGATGGCAAACTGGCCTTGGGTTGCAATGAAGCTCCAGG TCGCCAGGAGACGCATCTAGGACGGAACTTGATAGTCCCCAGCCCTTCTGCTCCATCCAC TTCGGCAGGAACTACAACGGAACTCATGGACTGTAACCACAGGATGGACCCCAGCAAAAC TGTGTCAGTATCTTCCACTTTGGCCACACTCCAGGAGAGAAGGTGTCTCTACGTGGTCCT TACGGATTCTCGCTGCTTCCTAGTGTGCATGTGTTTTCTGACTTTCATCCAGGCGTTAAT GGTCTCTGGGTACCTGAGCAGTGTCATCACCACCATTGAAAGGCGCTATAGCTTGAAGAG TTCTGAGTCAGGGCTGCTGGTCAGCTGCTTTGATATAGGAAACTTGGTGGTGGTGGTGTT CGTCAGCTACTTTGGTGGCCGTGGGCGAAGGCCCCTATGGCTGGCAGTGGGTGGACTTCT TATTGCCATCGGGGCTGCGCTCTTCGCTTTACCTCACTTTATCTCACCCCCCTATCAAAT CCAAGAGTTGAACGCTTCGGCCTCCAACGATGGCCTTTGTCAGAATGGCAACTCCACGGC CATCTTGGAGCCTCCTCCTTGTCCCAAGGACTCGGGAGGAAATAGTCACTGGATCTACGT GGCTTTATTCGTTTGTGCACAGGTTCTCATTGGAATGGGCTCTACACCAATTTACACCCT GGGACCAACCTATTTAGATGACAACGTCAAGAAAGACAATGCATCCTTGTACCTAG
	INTRON 1 - 2	12944113	12989579			45467	GTAAGACTTGGAATTCTCAGGCATG..........TCCCTTCCCCTCTCTCTCTCTCCAG
2	EXON 2	12943980	12944112	1	2	133	CCATCATGTATGTCATGGGAGCACTCGGCCCTGCAGTAGGATACTTACTAGGTGGGCTAC TCATTGGCTTTTATGTGGATCCCAGAAATCCTGTTCACCTTGACCAGAGTGACCCTCGTT TCATCGGAAACTG
	INTRON 2 - 3	12939201	12943979			4779	GTGAGTGTTTTCCACATTTTCTATT..........CAACTGACATTTCCCAATTTTTTAG
3	EXON 3	12938989	12939200	2	1	212	GTGGAGTGGATTCCTTCTTTGTGCCATTGCAATGTTTCTTGTGATATTCCCAATGTTTAC TTTTCCAAAAAAGCTTCCACCTCGACACAAGAAAAAGAAAAAATTTTCTGCCGATGTCGT TATCGACGATGACATCATCAAGGAGAAATCAAACACAAGTGAACAAATGAACAAAAAAGT TTCTCCAATGGGCTTTGGAAAGAATGTCAGAG
	INTRON 3 - 4	12921203	12938988			17786	GTAAAGTATATCTCTTAAATGAATC..........ATGTATTACTTCCTTCATTTTGTAG
4	EXON 4	12921038	12921202	1	1	165	ACCTACCAAGAGCAGCTGTCAGGATCTTAAGCAACATGACATTCCTTTTTGTGAGTCTGT CATACACAGCTGAGAGTGCCATTGTCACCGCTTTCATTACCTTCATCCCCAAGTTCATCG AGTCACAGTTTGGTATCCCAGCTTCCAATGCCAGCATCTACACTG
	INTRON 4 - 5	12894626	12921037			26412	GTAAGGCACTGCCGCTAGGGCTGCT..........AACCCTCTTTTCCTCTTCTTCCAAG
5	EXON 5	12894427	12894625	1	2	199	GTGTCATCATTGTCCCCAGTGCTGGTGTTGGTATTGTCCTGGGAGGCTACATCATAAAAA AACTGAAGCTTGGTGCAAGAGAATCTGCAAAGCTAGCCATGATCTGCAGCGGGGTTTCTC TGCTGTGCTTCTCCACCCTGTTCATTGTTGGCTGTGAAAGCATTAATCTAGGAGGCATAA ACATCCCTTACACAACGGG
	INTRON 5 - 6	12881453	12894426			12974	GTAAGTGCCTCTTAGGGGCATCATC..........CTCCCTCTCTCTCTCTCTCTCTCAG
6	EXON 6	12878595	12881452	2	-	2858	ACCTTCTCTGACCATGCCCCATAGGAATCTGACAGGAAGCTGTAATGTTAATTGTGGCTG TAAAATACACGAATATGAGCCAGTCTGTGGATCAGATGGGATCACATACTTCAACCCATG TCTGGCTGGCTGCATTAACAGTGGTAATCTTACCACTGGGGTGAGTAGACACCCTACGTT GTTCTTCTATTGTGAGGCCAGCATCATGAGACAGGTGATGGGACCCCAGGCACCCATGAT GACTTCAGTTTCCCTTGTTCATGAGGCTCCAAATAGCCCTCCAGGTACCTCTGAAAAACC TCTCCCGAGACAAAAAATTGTGCAGGGCTATTACTTTTGTCAAATGTGTTAGTAGGAGCT AGGTGTAGAGTTCTGGTCCTCATTAGCTGGATTCTGTTTTACATTCATGCCAACTCAGGG AAACTTGATAAGGTTGGACTCCAGGCTTCCCATTTCTTCCTCTGGCAGGGTCTTTTTAAT GAATCTGAAGGTCAAGGTTATCACTGTTGCCACTGAGAAAAGAGACTAGAGGCTGAGGAG GCTGGTCCGCTAAGTGGTGGCTGTGAAGATGGGCAATGGCCATTATTCATAAGCCCGTCA GTTAACTTTCTCCCCTACCCCTTAACTTCCAGAGTAAAGATATTTCTGTCAGCTGAAGAA TAGTCTATTTTGAGAATTTTCTTCCCTGTGAATTATAAATAGGCTTTAATACTGTGGGGG AAGGTTTTTTATATTCTACTCTATTCTTTACTGAGCCCAATTTGGCTGTTAGCATTAGAA CAGATAGGAGGTGACTGCCTTAATTTAAAGGTTAAAATGCATTTGCTTCTTCTGTGCCTA TCTAGAGACTATACCACTGACCGAGAGTTTAGGGGTGCCACTTTTTTTTTTCTCAGTTTG AAACCAGAGGGCAACATGGATATTACTATTGCTGGTTCCCAATGACATAGCTGGCAAGCT CTGGAGATTGACCTATTGAGGTCATGAGATCATTTCTTTGCAGTGAAGCCCCTGTTGCAT GGCATTGAATGAGACCTCGTGGACCCATTGTTATATTATTAAGGACTGAACATCCTTAAT GGCCTAAATGGCTAAATACCCCGTGCCCAACCTGCTCTTACCACTGTTTTAAGCAGGCAC CATGAGAACTAGTTCAGTTGATTTCCATTTAGTAAAAAGTAACATGATAGGCAGAGGATA AATTGGCCAGTTTAATATTTCTCATCTTGTTTGGTAACATCAAGTAACATCAAGAAGAGT TCCTGACCTTTGTGTCTTGCTCAGTAGACACAATGTGTGATTACTGGAGAAGACGTGGTC TTCTTTACCCCTCCGTCTTCAGTGCCCTCTAACAGCATGTCCTACATTAGTAGGGCCAGA CATATGTTGGAGAAAATAGACAAGCAATGTGGAGCCCAGCAGGGTTTTCAGACAGCTGGA GTCTGCCAGAGTCCAGAGAACTGGGCCGAGGCTGGAGTACAGACTGAAGTGATGACGACT CCATCCCTTCACCTGAAGGTCACCAGCTTGCTGAGGGGACTGAAAGGGGGGTAAACTGGA ATAGCCAACGGAACATCCCTCATCACTGTACTGAAACCAGCATCCCTAGGCCAGCCCATC TGCACACCGGAAGCCATCATGTGTGTGTTAGGAGTTTAATAGATGCTTATTTTAGGACTC ACTATGTGCTCAAACGTGTGTTAGGCACTCTGGTGAGCACACATAAAAATCAAGCTGGAT TCTGTTTTCAGGGCCTCGCTAACTGGGGAGTCTACAAGTTCAACAGCAATCAAAGCTGTG TGTATTTGTGACCCCAAATGAGCATGTAGCATGTCACAGAATTGAACTTTGAAGCTTCTT AGGGAAGTTTAGGATTAAACAGTCTAACTAGCAGGTTTTGATATTATCAAGGCAATCGTT GACCCATTAGTGCTGTTACCAAAGTATTTTGTGTGAATTATTAAACATTCTTTAAAATCC TATAGTTATTTTAAAGCATTCTTACTTTGTTAATATTTCCATGCCAGGCTTTATTCTTGA CTGGCCTATAACTTATCTTTATTTGCTACTCAGGTCCGAAATTACACAGAGTGCACCTGT GTCCAAAGTCGACAAGTGATCACCCCGCCCACAGTGGGGCAGCGCAGCCAGCTCCGAGTG GTCATCGTCAAAACCTATCTCAATGAGAACGGCTATGCTGTGTCTGGGAAGTGCAAACGC ACCTGCAATACCCTCATTCCCTTCCTGGTCTTCCTTTTCATAGTTACCTTCATCACAGCA TGTGCCCAACCATCAGCCATTATAGTGACTCTCAGGTGAGAACAGCTCCAGGCAGTGCTT GAGAGAGCCTATTGCAGAGGGACAGAAGTCAAACAAAGCAGGGGATAGGAAGGAAAAGCT GCTGGCAGGCACCCATACGTGCTCTTCTGGGCTTAAGGGAGAAAAGCTTTTATATCAGGG AGAAAAGGATGGCTGAAATACTGTCTATTCTAGAATCTTTTTTCAGCTGGGTGCTATTCT TATTATTTATCAAACTTTCTTTCTAGTGCTTTTAGTGTCCGAAGTCTTTGTGCTATGAAG TCAGACATCATGAGTTGAAAGCCCTGTTTATGGGGCTGGAGAGATGGCTCACCGTTCAGA GCATTGAATGCTCCTCCAGAGGGGCTGGGTTTGATTTCCAGTACCCACACACATAATCTT CTGTAATTCCAGTTACATGTGACACCTTCTTGTCCCCATCACAGGCACCAGACATGCAAA AGGTGCACATATATACATGTGGGTATACACATAAATTTAAATAATCTTAAAGAAAAATTG AAAGAAGAGAGAAAGAGGAAAGAAGGAATGAAAGAAAG
	3' upstream sequence						AAAGAAAGAAAGAAAGAAAAGGAAAGGAAAGAAAAGAAAAGAAAAGAAAAGAAGAAGAAA AGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGTCATCTCTATGTTAGCATC AAGAAGCCAGACCCTCAGGCAGGGCAGGAATACTTGGGAAAAGTGACTAGATTATGAATA TTGCAAAGGGTATTATTATCTCTGGCCTCATGGATAGTTAATATTGCACCTTTGGGATCA GTGAAGAATTATGCTGGGCTTGCATTTCAAAATGCTGAGTTCATTAATTTTACTACTGTA TGAAGTCCTGGAGCTGAATCAAGAACAGAATAGACTTGGAAATCTGAGCTTTCAGCTGGT CAGGCTGTGCTTTCACTGCTGTGTTGCATATCCTGGAGGAGGTTTTGTTTTGGTTTGTTT TTTTTTTTTTTTTCCTAGGAGAGGACTTGGAAGCTACTTTTGTTCTGTTCCATTGAGATC AGTTTGTTATTCCTTGCATTAAAAGCTGTGCATACATGGCCAGGTAGGAAAGGACAGGGT TGGAAGCCTGAAGAACACATTGTGGGTTAGAGGGAGGGAGCAGGGAGGTGGTGCAGAGAG AGCCTGAGGAAGAGAGTCTACCCGTGTTCCCTTTGCCTGGTTCTTCCAACCCCACAATGC TGGGCATTGGGCCCGGAAACATCATGTTCTCTGAGAGTGTTAGCCTGAATCATACACACT GTATCACACACACTGTATCACGCTCACTGTATCACGCACACTGAATCACACACACTGTAT CACACACACTGTATCACACACACTGTATCACGCACACTGGCTTCTTCCTCATTGGACCCC GAGATAGGCAGTTCCTGAGTGGGAGAAAGCAGGGCATTCAAGGCTCCCTGGTCTACTCAC TGTCAGCAGATCTTGATGGAGCAGCCCTGTATGCAGAGCTGGCAAATTGCTAGGAGACAC AGATAATATGAGGATGACAGTAAGGACACCAGGCTCAGAA..........

Sequence Detail Report

Gene Symbol (Gene ID)	Slco5a1 (ENSMUSG00000025938)
Transcript ID	ENSMUST00000136197

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 659 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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