MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

AU018091 (ENSMUSG00000054753)

Cross Reference

CCDS	CCDS39724.2
Clone_based_vega_transcript	CAAA01093181.2-001
EMBL	CAAA01093181
GO	GO:0000064, GO:0003674, GO:0005575, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005623, ...show all
MGI_trans_name	AU018091-001
OTTP	OTTMUSP00000073967
OTTT	OTTMUST00000141583
Reactome	R-MMU-352230, R-MMU-382551, R-MMU-425393, ...show all
RefSeq_mRNA	NM_001004153.2

RefSeq_mRNA_predicted	XM_006539984.2, XM_006544873.2
RefSeq_peptide	NP_001004153
RefSeq_peptide_predicted	XP_006540047.1, XP_006544936.1
UCSC	uc009euk.1
UniParc	UPI00001E42B9
Uniprot/SPTREMBL	E9PWS4
Vega_transcript	CAAA01093181.2-001, OTTMUST00000141583
Vega_translation	199700, OTTMUSP00000073967

Definition

protein_id:ENSMUSP00000126800
translation:

MLWVLPPPTLKNFQLLCSTDLELCPRNTSSTPGFHPVSAEFGSLHQALKMLWQNLHQFGQ
KLVRRRPLAANEQSESSLSRCLTTLDLVSLGVGSTLGAGVYVLAGEVAREKAGPSIIICF
LIAALSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVAR
AWSAAFDGLIGNHISQAMQTTFPIQVPSFLAKYPDFFALGLVIVLTGILALGARESALVT
RVFTGVNLLVLCFVSLSGLINGKLHNWQLTEDDYKLALLESNNTDSLGPMGSGGFMPFGL
KGILRGTATCFFAFIGFDCIASTGEEARCPQRSIPLGIVTSLFICFLMYFGVSGALTLMI
PYYQININSPLPQAFIHVGWGPARYAVAVGTLCALSSSLIGSIFPVPRVVYSMAEDGLLF
RKLAYVHPRTHTPVLATVLCGIIAAFMAFLVELSDLVDLSSIGTLLAYTLVTFSVLILRY
QPDQVLSSCKREKSESAAVELEPGLEPSSCMEPISPEGMPGIARTLCIPTNTTPTLRSGR
IVYGCASLLVFLLMLLCLILTQWSTQLFSGDPVLIAMAASLLLLTVGVITVIWRQPQSTT
PLHFKVPALPVLPALSIFVNIYLMMQMTSGTWFRFGIWMVIGFAIYFGYGIQHSLEEKND
QQPTASSSQTLQELQEHTPSVDLP

Chromosome

Length
Position(start - end)

13150
3155978 - 3169129

Orient to Chromosome

minus

Link

Location : (7:3155978-3169129)
/

Detail Map

name	AU018091 (ENSMUSG00000054753)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : AU018091 note : expressed sequence AU018091 [Source:MGI Symbol;Acc:MGI:2142124]

name	AU018091 (ENSMUSG00000054753)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000171749

name	AU018091 (ENSMUSG00000054753)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000203937

name	AU018091 (ENSMUSG00000054753) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS39724.2 RefSeq_peptide:NP_001004153 RefSeq_mRNA:NM_001004153.2 RefSeq_mRNA_predicted:XM_006539984.2 RefSeq_mRNA_predicted:XM_006544873.2 RefSeq_peptide_predicted:XP_006540047.1 RefSeq_peptide_predicted:XP_006544936.1 Vega_transcript:CAAA01093181.2-001 Vega_transcript:OTTMUST00000141583 Uniprot/SPTREMBL:E9PWS4 UCSC:uc009euk.1 Clone_based_vega_transcript:CAAA01093181.2-001 EMBL:CAAA01093181 GO:GO:0000064 GO:GO:0003674 GO:GO:0005575 GO:GO:0005887 GO:GO:0008150 GO:GO:0015181 GO:GO:0015189 GO:GO:0015297 GO:GO:0097638 GO:GO:1903352 GO:GO:1903401 MGI_trans_name:AU018091-001 Vega_translation:199700 Vega_translation:OTTMUSP00000073967 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0005886 goslim_goa:GO:0006810 goslim_goa:GO:0008150 goslim_goa:GO:0022857 goslim_goa:GO:0055085 OTTP:OTTMUSP00000073967 OTTT:OTTMUST00000141583 Reactome:R-MMU-352230 Reactome:R-MMU-382551 Reactome:R-MMU-425393 Reactome:R-MMU-425407 UniParc:UPI00001E42B9
definition	note : transcript_id=ENSMUST00000171749 protein_id : ENSMUSP00000126800 translation : MLWVLPPPTLKNFQLLCSTDLELCPRNTSSTPGFHPVSAEFGSLHQALKMLWQNLHQFGQKLVRRRPLAANEQSESSLSRCLTTLDLVSLGVGSTLGAGVYVLAGEVAREKAGPSIIICFLIAALSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVARAWSAAFDGLIGNHISQAMQTTFPIQVPSFLAKYPDFFALGLVIVLTGILALGARESALVTRVFTGVNLLVLCFVSLSGLINGKLHNWQLTEDDYKLALLESNNTDSLGPMGSGGFMPFGLKGILRGTATCFFAFIGFDCIASTGEEARCPQRSIPLGIVTSLFICFLMYFGVSGALTLMIPYYQININSPLPQAFIHVGWGPARYAVAVGTLCALSSSLIGSIFPVPRVVYSMAEDGLLFRKLAYVHPRTHTPVLATVLCGIIAAFMAFLVELSDLVDLSSIGTLLAYTLVTFSVLILRYQPDQVLSSCKREKSESAAVELEPGLEPSSCMEPISPEGMPGIARTLCIPTNTTPTLRSGRIVYGCASLLVFLLMLLCLILTQWSTQLFSGDPVLIAMAASLLLLTVGVITVIWRQPQSTTPLHFKVPALPVLPALSIFVNIYLMMQMTSGTWFRFGIWMVIGFAIYFGYGIQHSLEEKNDQQPTASSSQTLQELQEHTPSVDLP

name	AU018091 (ENSMUSG00000054753) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:CAAA01093181.2-003 Vega_transcript:OTTMUST00000141584 Clone_based_vega_transcript:CAAA01093181.2-003 MGI_trans_name:AU018091-003 Vega_translation:199701 Vega_translation:OTTMUSP00000073968 OTTP:OTTMUSP00000073968 OTTT:OTTMUST00000141584
definition	note : transcript_id=ENSMUST00000203937 protein_id : ENSMUSP00000144796 translation : TLKNFQLLCSTDLELCPRNTSSTPGFHPVSEFGSLHQALKMLWQNLHQFGQKLVRRRPLAANEQSESSLSRCLTTLDLVSLGVGSTLGAGVYVLAGEVAREKAGPSIIICFLIAALSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVARAWSAAFD

name
type	STS
link
xref	UniSTS_NUM:179514 UniSTS:AU018091 WI_MRC-RH:358149
definition	note : map_weight=1 standard_name : AU018091

name
type	misc_feature
link
xref
definition	note : contig CAAA01093181.1 1..29965(-1)

name
type	misc_feature
link
xref
definition	note : contig CAAA01093177.1 1..13619(-1)

name	AU018091 (ENSMUSG00000054753)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000141582 Vega_transcript:OTTMUST00000141582 Clone_based_vega_transcript:CAAA01093181.2-002 MGI_trans_name:AU018091-002 OTTT:OTTMUST00000141582
definition	note : processed_transcript note : transcript_id=ENSMUST00000205185

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	AU018091 (ENSMUSG00000054753)
Transcript ID	ENSMUST00000171749

Reports
substitution
cSNPs	4
Insertion	22
Deletion	31
SNPs	+1kb 3169262(c.-133A>G), 3169321(c.-192G>C), 3169536(c.-407C>T), 3169561(c.-432G>A), 3169857(c.-728T>C), 3169884(c.-755C>T), 3169946(c.-817G>A), 3170285(c.-1156A>G), 3170286(c.-1157A>C), 3170314(c.-1185T>C), 3170344(c.-1215T>G), 3170361(c.-1232A>G), 3170375(c.-1246A>C), 3170414(c.-1285T>C), 3170429(c.-1300C>G), 3170435(c.-1306T>C), 3170493(c.-1364A>T), 3170769(c.-1640C>T), 3170902(c.-1773A>G), 3171338(c.-2209T>C), 3171415(c.-2286G>C), 3171637(c.-2508C>T), 3171787(c.-2658C>A), 3171856(c.-2727T>C), 3171867(c.-2738T>C), 3172311(c.-3182G>C), 3172466(c.-3337A>G), 3172705(c.-3576C>A), 3172728(c.-3599G>T), 3173230(c.-4101C>T), 3173594(c.-4465C>G), 3174022(c.-4893C>T), 3174027(c.-4898C>G), 3174140(c.-5011C>T), 5'UTR CDS 3158069(c.1651T>C), 3159448(c.951C>T), 3161380(c.708T>C), 3164217(c.196C>A), 3'UTR 3154761(c.1217T>A), 3154809(c.1169C>T), 3155052(c.926T>C), 3155144(c.834A>T), 3155272(c.706A>C), 3155276(c.702T>G), 3155805(c.173C>G), 3155807(c.171C>G), INTRON 3156427(c.1816-53G>A), 3156518(c.1816-144C>T), 3156548(c.1816-174G>A), 3156563(c.1816-189C>T), 3156596(c.1816-222C>T), 3156838(c.1816-464G>A), 3157051(c.1816-677G>A), 3157339(c.1815+566T>G), 3157679(c.1815+226A>G), 3157837(c.1815+68C>T), 3157885(c.1815+20T>G), 3158126(c.1649-55C>T), 3158155(c.1648+63G>A), 3159558(c.858-17C>T), 3159742(c.858-201C>T), 3159791(c.858-250G>A), 3159851(c.858-310A>G), 3159992(c.858-451G>A), 3160039(c.858-498G>A), 3160118(c.858-577C>A), 3160200(c.858-659C>T), 3160295(c.858-754T>G), 3160755(c.857+476A>G), 3160756(c.857+475C>T), 3161415(c.680-7C>A), 3161964(c.679+238G>A), 3162048(c.679+154T>C), 3162374(c.521-14G>T), 3162479(c.521-119A>G), 3162515(c.521-155C>T), 3162848(c.521-488A>G), 3162854(c.521-494T>C), 3162968(c.521-608T>C), 3163101(c.521-741C>T), 3163839(c.520+54C>T), 3164405(c.116-108A>G), 3164440(c.116-143A>G), 3164505(c.116-208A>T), 3164598(c.116-301A>C), 3164618(c.116-321C>T), 3164764(c.116-467G>A), 3164765(c.116-468A>T), 3164850(c.116-553G>C), 3164948(c.116-651G>A), 3165441(c.116-1144A>G), 3166495(c.116-2198G>A), 3166616(c.116-2319T>C), 3166738(c.115+2277C>T), 3167885(c.115+1130G>A), 3168005(c.115+1010A>T), 3168455(c.115+560T>C), 3168497(c.115+518A>G), 3168625(c.115+390T>G), 3168778(c.115+237A>T), -1kb 3149954(c.6024C>G), 3150154(c.5824T>G), 3150193(c.5785T>C), 3150318(c.5660A>G), 3150324(c.5654G>A), 3150342(c.5636T>C), 3151233(c.4745A>G), 3151656(c.4322T>C), 3151860(c.4118T>A), 3151962(c.4016A>G), 3152092(c.3886G>A), 3152118(c.3860T>G), 3152119(c.3859C>T), 3152120(c.3858T>C), 3152141(c.3837A>G), 3152160(c.3818A>T), 3152179(c.3799A>G), 3152185(c.3793T>C), 3152189(c.3789G>T), 3152190(c.3788A>G), 3152612(c.3366G>A), 3152918(c.3060C>T), 3153141(c.2837G>T), 3153205(c.2773G>A), 3153468(c.2510T>C), 3153548(c.2430T>C), 3153817(c.2161G>A), 3153942(c.2036G>A), 3153957(c.2021A>G), 3154445(c.1533A>C), 3154471(c.1507C>T), 3154472(c.1506C>T), 3154484(c.1494C>T), 3154485(c.1493T>C),
Insertions	+1kb 3170161 (c.-1033_-1032insA), 3171733 (c.-2605_-2604insTTA), 3171990 (c.-2862_-2861insAACAAAA), 3174074 (c.-4946_-4945insTTTTCTTTT), 5'UTR CDS 3'UTR 3155375 (c.602_603insAG), 3155408 (c.569dupA), 3155417 (c.560_561insA), 3155915 (c.62_63insCCCT), INTRON 3156888 (c.1816-515_1816-514insG), 3156891 (c.1816-518dupG), 3157007 (c.1816-634_1816-633insAAAAA), 3157513 (c.1815+386_1815+391dupATAAAA), 3159721 (c.858-181_858-180insAT), 3165410 (c.116-1114dupT), 3166286 (c.116-1990_116-1989insTG), 3166972 (c.115+2040_115+2042dupAAA), 3167168 (c.115+1846_115+1847insG), -1kb 3152219 (c.3758_3759insT), 3152685 (c.3292_3293insT), 3154092 (c.1885_1886insAAGTTC), 3154213 (c.1764_1765insC), 3154485 (c.1492_*1493insCCT),
Deletions	+1kb 3169305 (c.-181_-177delGAGAG), 3169818 (c.-691_-690delAT), 3170161 (c.-1035_-1033delAAC), 3170185 (c.-1059_-1057delAAC), 3170205 (c.-1081_-1077delAAAAA), 3170388 (c.-1260delG), 3171294 (c.-2167_-2166delTT), 3171522 (c.-2394delG), 3172258 (c.-3130delC), 3173305 (c.-4177delT), 5'UTR CDS 3169105 (c.22_24delCCT), 3'UTR 3155041 (c.931_936delTTGTTT), 3155628 (c.347_349delCTT), INTRON 3156576 (c.1816-211_1816-203delCTGCACCCC), 3156787 (c.1816-420_1816-414delATAAAAG), 3159337 (c.971-64delA), 3160718 (c.857+509_857+512delAATT), 3161073 (c.857+156_857+157delTT), 3161080 (c.857+149_857+150delTT), 3164837 (c.116-541delC), 3164931 (c.116-636_116-635delTA), 3165022 (c.116-732_116-726delTGTGGGG), 3165198 (c.116-909_116-902delACATGCAC), 3165226 (c.116-930delA), 3166748 (c.115+2265_115+2266delGT), 3167027 (c.115+1982_115+1987delTAGTGA), 3167246 (c.115+1764_115+1768delAAAAA), 3167644 (c.115+1366_115+1370delAAAAG), -1kb 3150764 (c.5212_5213delTC), 3151732 (c.4238_4245delTTTTATTA), 3152775 (c.3195_3202delGTTTACAT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	3
non-synonymous num	1
synonymous substitutions	3159448 (p.Phe317Phe), 3161380 (p.Ser236Ser), 3164217 (p.Arg66Arg),
non-synonymous substitutions	3158069 (p.Phe551Leu),
B6 transcript (ENSMUST00000171749)	MLWVLPPPTLKNFQLLCSTDLELCPRNTSSTPGFHPVSAEFGSLHQALKMLWQNLHQFGQ KLVRRRPLAANEQSESSLSRCLTTLDLVSLGVGSTLGAGVYVLAGEVAREKAGPSIIICF LIAALSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVAR AWSAAFDGLIGNHISQAMQTTFPIQVPSFLAKYPDFFALGLVIVLTGILALGARESALVT RVFTGVNLLVLCFVSLSGLINGKLHNWQLTEDDYKLALLESNNTDSLGPMGSGGFMPFGL KGILRGTATCFFAFIGFDCIASTGEEARCPQRSIPLGIVTSLFICFLMYFGVSGALTLMI PYYQININSPLPQAFIHVGWGPARYAVAVGTLCALSSSLIGSIFPVPRVVYSMAEDGLLF RKLAYVHPRTHTPVLATVLCGIIAAFMAFLVELSDLVDLSSIGTLLAYTLVTFSVLILRY QPDQVLSSCKREKSESAAVELEPGLEPSSCMEPISPEGMPGIARTLCIPTNTTPTLRSGR IVYGCASLLVFLLMLLCLILTQWSTQLFSGDPVLIAMAASLLLLTVGVITVIWRQPQSTT PLHFKVPALPVLPALSIFVNIYLMMQMTSGTWFRFGIWMVIGFAIYFGYGIQHSLEEKND QQPTASSSQTLQELQEHTPSVDLP*
MSMv4 transcript	MLWVLPPPTLKNFQLLCSTDLELCPRNTSSTPGFHPVSAEFGSLHQALKMLWQNLHQFGQ KLVRRRPLAANEQSESSLSRCLTTLDLVSLGVGSTLGAGVYVLAGEVAREKAGPSIIICF LIAALSSVMSGLCYAEFGARVPCSGSAYLYSYVTVGQLLAFITGWNLILNYVIGAASVAR AWSAAFDGLIGNHISQAMQTTFPIQVPSFLAKYPDFFALGLVIVLTGILALGARESALVT RVFTGVNLLVLCFVSLSGLINGKLHNWQLTEDDYKLALLESNNTDSLGPMGSGGFMPFGL KGILRGTATCFFAFIGFDCIASTGEEARCPQRSIPLGIVTSLFICFLMYFGVSGALTLMI PYYQININSPLPQAFIHVGWGPARYAVAVGTLCALSSSLIGSIFPVPRVVYSMAEDGLLF RKLAYVHPRTHTPVLATVLCGIIAAFMAFLVELSDLVDLSSIGTLLAYTLVTFSVLILRY QPDQVLSSCKREKSESAAVELEPGLEPSSCMEPISPEGMPGIARTLCIPTNTTPTLRSGR IVYGCASLLVLLLMLLCLILTQWSTQLFSGDPVLIAMAASLLLLTVGVITVIWRQPQSTT PLHFKVPALPVLPALSIFVNIYLMMQMTSGTWFRFGIWMVIGFAIYFGYGIQHSLEEKND QQPTASSSQTLQELQEHTPSVDLP*
homology	99.85 (685 / 685)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	AU018091 (ENSMUSG00000054753)
Transcript ID	ENSMUST00000171749


..........AAACAAAACAAAACAAACAAACAAACAAACAAACAAACAAACAAAAAAAA
CAGAGAAGAGAACAGGGTCTCAACTATGTAGCCAGGGCTACTTGCCAGCCTGAACCTCAC
TATGGAGCTGAGGCCAAGCTAGTCTCAAATTCACAGAAATCTGTTTGAATCAGCTTCCGG
AATGCTGATTTAAAGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTGTTG
TTGTTTTTTGACACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGTACTGACTTTCTAT
ACCAGGCTGGCCTCGAACTCAGAAATCTATCTGCCTTTCCCTCCCAAGTGTTGGGACTAA
AGGCGTGCGCCACCACACCCTGCCCATATATATATTTTTTAAAGTCTTATTTTTCTACAT
TATGTGTATGTGTATGTGTGTGTGGGGGGTATATATAGTACTATTCATGCATGTACTCAC
AGAAGCCAGAGGCATCAGATCCACTGGAGTTTGAGTGATAGAATTTCAAGTGGCCAGGAA
TGGATGCTGGAAACAGAAACTCCATCCACTGGTAGAGTAGCAATTATCACCGAGCCAACC
CTCCAGTTCTGTAGTATTATTACTTTAATTGTAATTTTAAAAGTGCAAAGGTACTTCTAA
TCCCAGTTATCTGGAAGTAGAGGCAGGTGTCCACCTGTGAGTTTCTGTGAGTTTGAAGTC
AGCCTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAGAGAGAGA
GAGAGAGAGAGAGACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAAGAGA
GAGGAGAGAGACAAAGAGAGAGATAGAGACAGAGAGACAGAGAGAGACAGAGACAGAGAG
AGACAGAGACAGAGAGGGAATCTCCAGAACTAGGGGAAAGGTCTTTAGGA
CAGATGAGCTGTCAGCTGTCCCTCCCTGTTGGTCCCCACCCTACCCGCCAGGCACATTTCCGGTGGCTACTTGAATGCTGTGGGTCCTACCTCCTCCTACCTTAAAGAATTTTCAGCTTCTGTGCAGCACAGATCTGGAGCTCTGCCCCAGGAACACATCCAGCACTCCAGGATTTCATCCAGTGTCTG
GTAAGTCACTTGGAAGACTGTTTCA..........CAAGATTTCTCATCTTGTTTTCCAG
CAGAGTTTGGATCCCTCCACCAGGCACTAAAGATGTTATGGCAGAACCTCCATCAGTTTGGCCAGAAGTTGGTTCGCCGGAGGCCCCTGGCGGCAAACGAACAGTCTGAGTCTTCCTTGTCTCGATGTCTGACCACTTTGGACCTGGTGTCCTTGGGTGTGGGCAGTACCCTGGGTGCAGGCGTGTATGTCCTGGCCGGGGAGGTGGCCAGAGAGAAAGCTGGACCGTCCATCATCATCTGCTTCTTAATTGCTGCCCTGTCTTCAGTGATGTCAGGACTCTGTTATGCGGAGTTTGGGGCCAGGGTACCATGCTCGGGTTCCGCATATCTCTACAGCTATGTCACAGTGGGCCAGCTGTTGGCTTTCATCACTGGCTGGAACTTAATACTCAACTATGTCATTG
GTGAGGAGATGGGGGCAGGGTTTTA..........ATGAAGGTTCCTCTTCCTCTTGCAG
GTGCAGCCAGTGTGGCTCGGGCCTGGAGTGCAGCTTTTGATGGCCTCATAGGGAACCATATCTCCCAAGCCATGCAGACGACTTTCCCTATCCAAGTGCCCAGCTTTCTGGCCAAGTATCCAGACTTTTTTGCGCTTGGTCTGGTGATAGTTCTCACTG
GTGAGACAGGCTGGAGAGGGGTGGT..........CTTCTTTCCATTCCCTTTACCGCAG
GAATCCTCGCCCTGGGAGCACGAGAGTCCGCCCTGGTCACCAGGGTTTTCACAGGAGTGAATCTTTTGGTGCTGTGTTTCGTCTCCCTCTCTGGCCTCATTAATGGCAAGCTACACAACTGGCAGCTTACAGAGGATGACTACAAACTGGCTCTGTTAGAATCCAACAACACTGACAG
GTCAGGAGTCCCAAACAACACAGCT..........TTCCTCCTTCTTTCTCTTGCCACAG
CTTGGGACCAATGGGCTCTGGAGGGTTCATGCCTTTTGGCTTGAAGGGGATTCTCCGTGGTACAGCAACATGTTTCTTTGCCTTCATTGGGTTTGACTGTATTGCGAGTACAG
GTGAGTGAGCAGTAGTCCCTCTGTC..........ATCAAGGTCCGTTCCATCCCTGCAG
GGGAAGAGGCCCGCTGTCCCCAGCGTTCCATTCCATTGGGCATCGTGACCTCACTCTTCATTTGCTTTCTGATGTATTTTGGTGTTTCGGGGGCACTCACTCTCATGATACCCTACTACCAGATTAACATCAACAGCCCCTTGCCCCAGGCATTTATCCACGTTGGATGGGGGCCTGCTCGCTATGCAGTAGCTGTGGGAACCTTATGTGCCCTTTCATCCAG
GTTGGTATCAAAGGTTTTTCTCATT..........TTATGTCCCTATTCCCTAATAACAG
CCTCATAGGTTCCATTTTCCCTGTGCCTCGGGTGGTGTATTCCATGGCAGAGGATGGGCTCCTGTTCCGGAAACTTGCCTATGTTCATCCTCGAACACACACTCCGGTCCTAGCCACTGTCCTTTGTGGAATCATCGCAG
GTAAGACAGCCAGCCTTACCACTTT..........CCACCTTTTGTTCTTATCACTTTAG
CATTTATGGCTTTCCTCGTTGAGCTCAGTGATCTGGTGGACCTCTCGTCCATAGGGACCCTGCTGGCCTACACCTTAGTGACCTTCTCTGTTCTGATCCTCAG
GTGAGACTCCATCACGCCTTGGCTG..........TTCCCATGCTATATCGTTCGTTCAG
GTACCAGCCGGACCAGGTCTTAAGCTCTTGTAAGAGGGAGAAGTCTGAGAGTGCAGCTGTGGAGCTGGAGCCTGGACTTGAACCTTCTTCATGCATGGAGCCTATTTCTCCAGAAGGGATGCCAGGGATTGCAAGGACACTCTGTATCCCCACGAACACCACCCCAACTCTGAGATCTGGCCGGATTGTCTATGGATGTGCTTCCCTGCTCG
GTGATCACTGGGACTTTACTCCTTG..........GACTTCTCCCCGACTTGACTTGTAG
TCCTTCTTCTGATGCTCCTGTGCCTGATCCTGACCCAGTGGTCCACACAGCTATTCTCTGGGGACCCAGTTTTGATTGCCATGGCTGCTTCACTATTGCTTCTTACTGTCGGAGTGATCACTGTCATCTGGAGACAGCCTCAGAGCACCACTCCTCTCCACTTCAAG
GTAGGTGACTGACTTCTAAGATAAT..........TGGGATTTATAGGCCGTGTTTACAG
GTTCCAGCCCTGCCTGTGCTTCCTGCACTGAGTATCTTTGTGAATATCTACCTGATGATGCAAATGACTTCTGGGACCTGGTTTCGCTTTGGAATCTGGATGGTGATCG
GTGAGTAGCTTGCTGGGGAAGAGAT..........CACCTCACTGTCTATTCCCTTTTAG
GATTTGCTATCTACTTTGGATATGGGATACAGCACAGCTTGGAAGAGAAGAATGACCAACAGCCAACAGCCTCAAGCTCCCAGACTCTCCAGGAACTCCAGGAACATACTCCCAGTGTTGACTTACCTTAACTGGAGAAACGGGATGCTTCCAGGACCCCATGGGCATCAGTTTCCTTCCCTTCCCTTCCCTTTCCCTTTCCTCCCTCTTTCCCTTCCCCCTTTTCCTTTCCTCCCTCTTTCCCTTCCTTTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGGGGCGGGTTGGGAAGGCAGTACTGGGAATTGAACTTAGAGTCTTGTGCGTCTGAGGCAAATGCTCCATCACTGACCTAATCTCTTGTAGGTATCTTTAGGTCAAGGAAAAGTTTGAATATTTGTGGGCTGTAGATGGGACTTCTTTTCTTACTTTCTTTTTTTTTCTTCTTCTCTTTTTGGGACTTATATCATTGTAATTTTGTGAGCAAATTCCTTAACCTTTTTTTTTTTTTTGGTGTGTGTATTGAAATTGGATCCATGATTTTGCATATGCTAGGCAAGTAGTACTCTACCACTGAGCCACATCCCTAGTCCCTTTAGTTATTTAACTGACAGCAAAATTTAGGTATTTACATATTATAGAATGGTTAAAAAAACTGATTAATATATGTTTCTTTTTATGTTTGGGCAGTTAGTCTTCTATGGCTAAGGTCAGACTTGAACTTGATCTTCTGAACATTATTATTTATGGAGAGAGAGAAAACACATGTGTCACAGTGTTTGTGGAGGTCACAGGACAACTTTATAGGTTCCTTCTCCCTTTCCACTTTTCATGGATTGAACTCAGGTATTTAGGCTTTTGTGGCAACAGCTTTACCCACTGAGGCATCTTGTTGGCCCCTGTATCCCCTCCCCCACCCTTAAACAGTATCATAACTGAGAACTATCATGAACTCATGACCCTTCTGTCACCAGTTCTCCAAGTGTTGGTATTATAAGTGTGGACTGTGCTTGTTGTTGTTTTTTGTTCTGTTTTTCAAGACACAGGGTTTCTTGATGTAGTTCTGGCTATCCCTGTAACTTACTACAGTAAGTTAGATCAAGCTGGCCTTGAACACAGAGATCTCCCCCATGAGTGCTTAGATTAAAGGCATGTGCCACCTCTGGCCTATCTTCATGCTCAGTTACTGTGGTGCTAAACATTATGCCAGGGTTTTAAGCACATTTGGACAACCAATTTACCAACTGAGCTACATCCCCCAACCCTATGTTTATGTTTTGTGATGAAAACATTAAATTTTTTAAAACATTTTACAGATCTATAGTGCATTGTTCATCTGTGGCAACATGTATATGAACTTGGAGGATGTATATTATGTTAAGTGAAATAAATGAGGTTTGAACAAA
TATGACTTTATTTTTCTGTGTGTGTATGTGGGTACATCTGTGCTATGTGTGCATGTGGAC
ACCAGAGAACAGCTTGTGGGAGTCAGTTCTGTCTTGCCATGTGGGCTTCAGGCTTGAACT
CAGGTCATCAGACTTAGTAGCAAGTGCCTTGACTAGCTGAGCCATCTTGCCATCTTTTTT
TTTTTTTCCCAAAACACAGTTTCATTATTTAACCTAGGTTGGTCTCCAGCTCAGGCAACC
TTCCTGTATTGACCTCTTGAGTGCTGATTGTAGTGCATGCCACCACACCCAGCTAGATGG
CCTAATGCTCAATTCCTATAAGATTCAGAGACATGCTGGGTATGATGGCTGATACCTGAA
ACATATTTCTGGTAGAAGGATCACAAGTTTGAGGTCAGCTCAGCTTTCATGGTGATGCAG
GGAGGGAATATCAAACAAGCAAAAAAAAACAAGTATGGGCTGGAGAGATGGCTCCGTTAT
TAAACTTGCTACAGTACCTGGGTTTGATGCCCAGCATTCTCGTTGATGCCCAGCATTCTC
GTGGTGCTTCAACTCTCTGTTACTCTAAGGGATCCAGCACTTCCTTCTGGCCTCTGCAGG
CTCCTGAAAGCATGTGGTGCATGTACATACACTCAGTTATACACACACAAAACCAGAAAT
AACATGTAGAGACTGGGTGAACACAAAATTTACTATTGAAGCTTTATCAAAATGTAAACT
TTTTCTGCTGTGATGGGTGGGCATCAGAGCCAGAGACTTGCATCTTCCATGTAACTGCTC
TATTCCTGAGCTGCACTCCTACCCTGTTTATATATCAGAAAAACAAGTATGATAATCAAA
AGAAGGTTGATGTATTACTGTCATCTCAGAACAGTAGGCTAAGGCAGGATAATGCCCGGA
GTTGAAGACCAGCTTAGACTATGTAGTGAGACCCAGTTATAAAAAAGGGCCTGAGATAGA
TGGCTCAGTTGACAAGCATAAGGCCCTGACAAACATCAGA..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........AAACAAAACAAAACAAACAAACAAACAAACAAACAAACAAACAAAAAAAA CAGAGAAGAGAACAGGGTCTCAACTATGTAGCCAGGGCTACTTGCCAGCCTGAACCTCAC TATGGAGCTGAGGCCAAGCTAGTCTCAAATTCACAGAAATCTGTTTGAATCAGCTTCCGG AATGCTGATTTAAAGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGTTGTTG TTGTTTTTTGACACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGTACTGACTTTCTAT ACCAGGCTGGCCTCGAACTCAGAAATCTATCTGCCTTTCCCTCCCAAGTGTTGGGACTAA AGGCGTGCGCCACCACACCCTGCCCATATATATATTTTTTAAAGTCTTATTTTTCTACAT TATGTGTATGTGTATGTGTGTGTGGGGGGTATATATAGTACTATTCATGCATGTACTCAC AGAAGCCAGAGGCATCAGATCCACTGGAGTTTGAGTGATAGAATTTCAAGTGGCCAGGAA TGGATGCTGGAAACAGAAACTCCATCCACTGGTAGAGTAGCAATTATCACCGAGCCAACC CTCCAGTTCTGTAGTATTATTACTTTAATTGTAATTTTAAAAGTGCAAAGGTACTTCTAA TCCCAGTTATCTGGAAGTAGAGGCAGGTGTCCACCTGTGAGTTTCTGTGAGTTTGAAGTC AGCCTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAGAGAGAGA GAGAGAGAGAGAGACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAAGAGA GAGGAGAGAGACAAAGAGAGAGATAGAGACAGAGAGACAGAGAGAGACAGAGACAGAGAG AGACAGAGACAGAGAGGGAATCTCCAGAACTAGGGGAAAGGTCTTTAGGA
1	EXON 1	3169015	3169203	-	1	189	CAGATGAGCTGTCAGCTGTCCCTCCCTGTTGGTCCCCACCCTACCCGCCAGGCACATTTC CGGTGGCTACTTGAATGCTGTGGGTCCTACCTCCTCCTACCTTAAAGAATTTTCAGCTTC TGTGCAGCACAGATCTGGAGCTCTGCCCCAGGAACACATCCAGCACTCCAGGATTTCATC CAGTGTCTG
	INTRON 1 - 2	3164298	3169014			4717	GTAAGTCACTTGGAAGACTGTTTCA..........CAAGATTTCTCATCTTGTTTTCCAG
2	EXON 2	3163893	3164297	1	1	405	CAGAGTTTGGATCCCTCCACCAGGCACTAAAGATGTTATGGCAGAACCTCCATCAGTTTG GCCAGAAGTTGGTTCGCCGGAGGCCCCTGGCGGCAAACGAACAGTCTGAGTCTTCCTTGT CTCGATGTCTGACCACTTTGGACCTGGTGTCCTTGGGTGTGGGCAGTACCCTGGGTGCAG GCGTGTATGTCCTGGCCGGGGAGGTGGCCAGAGAGAAAGCTGGACCGTCCATCATCATCT GCTTCTTAATTGCTGCCCTGTCTTCAGTGATGTCAGGACTCTGTTATGCGGAGTTTGGGG CCAGGGTACCATGCTCGGGTTCCGCATATCTCTACAGCTATGTCACAGTGGGCCAGCTGT TGGCTTTCATCACTGGCTGGAACTTAATACTCAACTATGTCATTG
	INTRON 2 - 3	3162361	3163892			1532	GTGAGGAGATGGGGGCAGGGTTTTA..........ATGAAGGTTCCTCTTCCTCTTGCAG
3	EXON 3	3162202	3162360	1	1	159	GTGCAGCCAGTGTGGCTCGGGCCTGGAGTGCAGCTTTTGATGGCCTCATAGGGAACCATA TCTCCCAAGCCATGCAGACGACTTTCCCTATCCAAGTGCCCAGCTTTCTGGCCAAGTATC CAGACTTTTTTGCGCTTGGTCTGGTGATAGTTCTCACTG
	INTRON 3 - 4	3161409	3162201			793	GTGAGACAGGCTGGAGAGGGGTGGT..........CTTCTTTCCATTCCCTTTACCGCAG
4	EXON 4	3161231	3161408	1	2	178	GAATCCTCGCCCTGGGAGCACGAGAGTCCGCCCTGGTCACCAGGGTTTTCACAGGAGTGA ATCTTTTGGTGCTGTGTTTCGTCTCCCTCTCTGGCCTCATTAATGGCAAGCTACACAACT GGCAGCTTACAGAGGATGACTACAAACTGGCTCTGTTAGAATCCAACAACACTGACAG
	INTRON 4 - 5	3159542	3161230			1689	GTCAGGAGTCCCAAACAACACAGCT..........TTCCTCCTTCTTTCTCTTGCCACAG
5	EXON 5	3159429	3159541	2	1	113	CTTGGGACCAATGGGCTCTGGAGGGTTCATGCCTTTTGGCTTGAAGGGGATTCTCCGTGG TACAGCAACATGTTTCTTTGCCTTCATTGGGTTTGACTGTATTGCGAGTACAG
	INTRON 5 - 6	3159275	3159428			154	GTGAGTGAGCAGTAGTCCCTCTGTC..........ATCAAGGTCCGTTCCATCCCTGCAG
6	EXON 6	3159052	3159274	1	2	223	GGGAAGAGGCCCGCTGTCCCCAGCGTTCCATTCCATTGGGCATCGTGACCTCACTCTTCA TTTGCTTTCTGATGTATTTTGGTGTTTCGGGGGCACTCACTCTCATGATACCCTACTACC AGATTAACATCAACAGCCCCTTGCCCCAGGCATTTATCCACGTTGGATGGGGGCCTGCTC GCTATGCAGTAGCTGTGGGAACCTTATGTGCCCTTTCATCCAG
	INTRON 6 - 7	3158895	3159051			157	GTTGGTATCAAAGGTTTTTCTCATT..........TTATGTCCCTATTCCCTAATAACAG
7	EXON 7	3158755	3158894	2	1	140	CCTCATAGGTTCCATTTTCCCTGTGCCTCGGGTGGTGTATTCCATGGCAGAGGATGGGCT CCTGTTCCGGAAACTTGCCTATGTTCATCCTCGAACACACACTCCGGTCCTAGCCACTGT CCTTTGTGGAATCATCGCAG
	INTRON 7 - 8	3158658	3158754			97	GTAAGACAGCCAGCCTTACCACTTT..........CCACCTTTTGTTCTTATCACTTTAG
8	EXON 8	3158555	3158657	1	2	103	CATTTATGGCTTTCCTCGTTGAGCTCAGTGATCTGGTGGACCTCTCGTCCATAGGGACCC TGCTGGCCTACACCTTAGTGACCTTCTCTGTTCTGATCCTCAG
	INTRON 8 - 9	3158430	3158554			125	GTGAGACTCCATCACGCCTTGGCTG..........TTCCCATGCTATATCGTTCGTTCAG
9	EXON 9	3158218	3158429	2	1	212	GTACCAGCCGGACCAGGTCTTAAGCTCTTGTAAGAGGGAGAAGTCTGAGAGTGCAGCTGT GGAGCTGGAGCCTGGACTTGAACCTTCTTCATGCATGGAGCCTATTTCTCCAGAAGGGAT GCCAGGGATTGCAAGGACACTCTGTATCCCCACGAACACCACCCCAACTCTGAGATCTGG CCGGATTGTCTATGGATGTGCTTCCCTGCTCG
	INTRON 9 - 10	3158072	3158217			146	GTGATCACTGGGACTTTACTCCTTG..........GACTTCTCCCCGACTTGACTTGTAG
10	EXON 10	3157905	3158071	1	0	167	TCCTTCTTCTGATGCTCCTGTGCCTGATCCTGACCCAGTGGTCCACACAGCTATTCTCTG GGGACCCAGTTTTGATTGCCATGGCTGCTTCACTATTGCTTCTTACTGTCGGAGTGATCA CTGTCATCTGGAGACAGCCTCAGAGCACCACTCCTCTCCACTTCAAG
	INTRON 10 - 11	3156375	3157904			1530	GTAGGTGACTGACTTCTAAGATAAT..........TGGGATTTATAGGCCGTGTTTACAG
11	EXON 11	3156266	3156374	0	1	109	GTTCCAGCCCTGCCTGTGCTTCCTGCACTGAGTATCTTTGTGAATATCTACCTGATGATG CAAATGACTTCTGGGACCTGGTTTCGCTTTGGAATCTGGATGGTGATCG
	INTRON 11 - 12	3156109	3156265			157	GTGAGTAGCTTGCTGGGGAAGAGAT..........CACCTCACTGTCTATTCCCTTTTAG
12	EXON 12	3154658	3156108	1	-	1451	GATTTGCTATCTACTTTGGATATGGGATACAGCACAGCTTGGAAGAGAAGAATGACCAAC AGCCAACAGCCTCAAGCTCCCAGACTCTCCAGGAACTCCAGGAACATACTCCCAGTGTTG ACTTACCTTAACTGGAGAAACGGGATGCTTCCAGGACCCCATGGGCATCAGTTTCCTTCC CTTCCCTTCCCTTTCCCTTTCCTCCCTCTTTCCCTTCCCCCTTTTCCTTTCCTCCCTCTT TCCCTTCCTTTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TGTGTGTGTGTGTGTGTGTGTGGGGCGGGTTGGGAAGGCAGTACTGGGAATTGAACTTAG AGTCTTGTGCGTCTGAGGCAAATGCTCCATCACTGACCTAATCTCTTGTAGGTATCTTTA GGTCAAGGAAAAGTTTGAATATTTGTGGGCTGTAGATGGGACTTCTTTTCTTACTTTCTT TTTTTTTCTTCTTCTCTTTTTGGGACTTATATCATTGTAATTTTGTGAGCAAATTCCTTA ACCTTTTTTTTTTTTTTGGTGTGTGTATTGAAATTGGATCCATGATTTTGCATATGCTAG GCAAGTAGTACTCTACCACTGAGCCACATCCCTAGTCCCTTTAGTTATTTAACTGACAGC AAAATTTAGGTATTTACATATTATAGAATGGTTAAAAAAACTGATTAATATATGTTTCTT TTTATGTTTGGGCAGTTAGTCTTCTATGGCTAAGGTCAGACTTGAACTTGATCTTCTGAA CATTATTATTTATGGAGAGAGAGAAAACACATGTGTCACAGTGTTTGTGGAGGTCACAGG ACAACTTTATAGGTTCCTTCTCCCTTTCCACTTTTCATGGATTGAACTCAGGTATTTAGG CTTTTGTGGCAACAGCTTTACCCACTGAGGCATCTTGTTGGCCCCTGTATCCCCTCCCCC ACCCTTAAACAGTATCATAACTGAGAACTATCATGAACTCATGACCCTTCTGTCACCAGT TCTCCAAGTGTTGGTATTATAAGTGTGGACTGTGCTTGTTGTTGTTTTTTGTTCTGTTTT TCAAGACACAGGGTTTCTTGATGTAGTTCTGGCTATCCCTGTAACTTACTACAGTAAGTT AGATCAAGCTGGCCTTGAACACAGAGATCTCCCCCATGAGTGCTTAGATTAAAGGCATGT GCCACCTCTGGCCTATCTTCATGCTCAGTTACTGTGGTGCTAAACATTATGCCAGGGTTT TAAGCACATTTGGACAACCAATTTACCAACTGAGCTACATCCCCCAACCCTATGTTTATG TTTTGTGATGAAAACATTAAATTTTTTAAAACATTTTACAGATCTATAGTGCATTGTTCA TCTGTGGCAACATGTATATGAACTTGGAGGATGTATATTATGTTAAGTGAAATAAATGAG GTTTGAACAAA
	3' upstream sequence						TATGACTTTATTTTTCTGTGTGTGTATGTGGGTACATCTGTGCTATGTGTGCATGTGGAC ACCAGAGAACAGCTTGTGGGAGTCAGTTCTGTCTTGCCATGTGGGCTTCAGGCTTGAACT CAGGTCATCAGACTTAGTAGCAAGTGCCTTGACTAGCTGAGCCATCTTGCCATCTTTTTT TTTTTTTCCCAAAACACAGTTTCATTATTTAACCTAGGTTGGTCTCCAGCTCAGGCAACC TTCCTGTATTGACCTCTTGAGTGCTGATTGTAGTGCATGCCACCACACCCAGCTAGATGG CCTAATGCTCAATTCCTATAAGATTCAGAGACATGCTGGGTATGATGGCTGATACCTGAA ACATATTTCTGGTAGAAGGATCACAAGTTTGAGGTCAGCTCAGCTTTCATGGTGATGCAG GGAGGGAATATCAAACAAGCAAAAAAAAACAAGTATGGGCTGGAGAGATGGCTCCGTTAT TAAACTTGCTACAGTACCTGGGTTTGATGCCCAGCATTCTCGTTGATGCCCAGCATTCTC GTGGTGCTTCAACTCTCTGTTACTCTAAGGGATCCAGCACTTCCTTCTGGCCTCTGCAGG CTCCTGAAAGCATGTGGTGCATGTACATACACTCAGTTATACACACACAAAACCAGAAAT AACATGTAGAGACTGGGTGAACACAAAATTTACTATTGAAGCTTTATCAAAATGTAAACT TTTTCTGCTGTGATGGGTGGGCATCAGAGCCAGAGACTTGCATCTTCCATGTAACTGCTC TATTCCTGAGCTGCACTCCTACCCTGTTTATATATCAGAAAAACAAGTATGATAATCAAA AGAAGGTTGATGTATTACTGTCATCTCAGAACAGTAGGCTAAGGCAGGATAATGCCCGGA GTTGAAGACCAGCTTAGACTATGTAGTGAGACCCAGTTATAAAAAAGGGCCTGAGATAGA TGGCTCAGTTGACAAGCATAAGGCCCTGACAAACATCAGA..........

Sequence Detail Report

Gene Symbol (Gene ID)	AU018091 (ENSMUSG00000054753)
Transcript ID	ENSMUST00000171749

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 685 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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