MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Six4 (ENSMUSG00000034460)

Cross Reference

EMBL	AC159274
GO	GO:0003677, GO:0003700, GO:0005634, ...show all
goslim_goa	GO:0001071, GO:0002376, GO:0003674, ...show all
MGI_trans_name	Six4-002
OTTP	OTTMUSP00000058168
OTTT	OTTMUST00000104022
UniParc	UPI0004620EE1
Uniprot/SPTREMBL	H3BL91
Vega_transcript	OTTMUST00000104022, Six4-002
Vega_translation	213188, OTTMUSP00000058168

Definition

protein_id:ENSMUSP00000135699
translation:

MIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAAASRVSREE
GAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLDRLARFLWS
LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE
RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH
LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGA
SDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNG
VILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATT
SYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQ
FLNGSIGFSPLQLPPVSVAASQGKSFIWYQQCTRACVG

Chromosome

Length
Position(start - end)

4754
73108611 - 73113366

Orient to Chromosome

minus

Link

Location : (12:73108611-73113366)
/

Detail Map

name	Six4 (ENSMUSG00000034460)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Six4 note : sine oculis-related homeobox 4 [Source:MGI Symbol;Acc:MGI:106034]

name	Six4 (ENSMUSG00000034460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000043208

name	Six4 (ENSMUSG00000034460)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000175693

name	Six4 (ENSMUSG00000034460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS25974.1 Uniprot/SWISSPROT:Q61321 RefSeq_peptide:NP_035512 RefSeq_mRNA:NM_011382.2 RefSeq_peptide_predicted:XP_006515695.1 Vega_transcript:OTTMUST00000104021 Vega_transcript:Six4-001 UCSC:uc007nwb.1 EMBL:BC137931 EMBL:BC137934 EMBL:D50416 EMBL:D50417 EMBL:D50418 GO:GO:0000978 GO:GO:0001077 GO:GO:0003677 GO:GO:0003700 GO:GO:0005515 GO:GO:0005634 GO:GO:0005737 GO:GO:0006366 GO:GO:0007519 GO:GO:0008582 GO:GO:0008584 GO:GO:0010468 GO:GO:0030238 GO:GO:0030910 GO:GO:0032880 GO:GO:0034504 GO:GO:0042472 GO:GO:0043066 GO:GO:0043524 GO:GO:0043565 GO:GO:0043586 GO:GO:0045214 GO:GO:0045892 GO:GO:0045893 GO:GO:0045944 GO:GO:0046661 GO:GO:0048538 GO:GO:0048699 GO:GO:0048701 GO:GO:0048704 GO:GO:0048856 GO:GO:0050678 GO:GO:0051451 GO:GO:0060037 GO:GO:0061055 GO:GO:0061197 GO:GO:0061551 GO:GO:0072075 GO:GO:0072095 GO:GO:0072107 GO:GO:0090190 GO:GO:0098528 GO:GO:1902725 MGI_trans_name:Six4-001 Vega_translation:213187 Vega_translation:OTTMUSP00000058167 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0007010 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0009790 goslim_goa:GO:0022607 goslim_goa:GO:0030154 goslim_goa:GO:0034641 goslim_goa:GO:0040011 goslim_goa:GO:0043226 goslim_goa:GO:0048646 goslim_goa:GO:0048856 goslim_goa:GO:0048870 protein_id:AAI37932.1 protein_id:AAI37935.1 protein_id:BAA08915.1 protein_id:BAA08916.1 protein_id:BAA08917.1 OTTP:OTTMUSP00000058167 OTTT:OTTMUST00000104021 UniParc:UPI0000025868
definition	note : transcript_id=ENSMUST00000043208 protein_id : ENSMUSP00000036150 translation : MSSSSPTGQIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAAASRVSREEGAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGASDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNGVILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATTSYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQFLNGSIGFSPLQLPPVSVAASQGNLSVTPSTSDGSTFTSEPATVQHGKLFLSPLTPSAVVYTVPNSGQTVGAVKQEGLERGLVFSQLMPVNHSAQVNASLSSENLSGSGLHPLTSSLVNVSAAHGFSLTPPTLLNPTELNPDLAESQPVSAPVASKCTVSSVSNTNYATLQNCSLIPGQDLLSGPMTQAALGEIVPTAEEQVSHASTAVHQDFVREQRLVLQSVPNIKENFLQNSENKATNNLMMLDSKSKYVLDGMVEAGCEDLGTDKKELAKLQTVQLDEDMQDL

name	Six4 (ENSMUSG00000034460) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000104022 Vega_transcript:Six4-002 Uniprot/SPTREMBL:H3BL91 EMBL:AC159274 GO:GO:0003677 GO:GO:0003700 GO:GO:0005634 GO:GO:0007519 GO:GO:0008582 GO:GO:0010468 GO:GO:0032880 GO:GO:0042472 GO:GO:0043565 GO:GO:0045893 GO:GO:0045944 GO:GO:0048538 GO:GO:0048701 GO:GO:0048704 GO:GO:0048856 GO:GO:0051451 MGI_trans_name:Six4-002 Vega_translation:213188 Vega_translation:OTTMUSP00000058168 goslim_goa:GO:0001071 goslim_goa:GO:0002376 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0008150 goslim_goa:GO:0009790 goslim_goa:GO:0040011 goslim_goa:GO:0043226 goslim_goa:GO:0048856 goslim_goa:GO:0048870 OTTP:OTTMUSP00000058168 OTTT:OTTMUST00000104022 UniParc:UPI0004620EE1
definition	note : transcript_id=ENSMUST00000175693 protein_id : ENSMUSP00000135699 translation : MIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAAASRVSREEGAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGASDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNGVILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATTSYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQFLNGSIGFSPLQLPPVSVAASQGKSFIWYQQCTRACVG

name
type	STS
link
xref	UniSTS_NUM:124838 UniSTS:D50417
definition	note : map_weight=1 standard_name : D50417

name
type	misc_feature
link
xref
definition	note : contig AC159274.2 72601..200974(1)

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Six4 (ENSMUSG00000034460)
Transcript ID	ENSMUST00000175693

Reports
substitution
cSNPs	2
Insertion	9
Deletion	11
SNPs	+1kb 73115665(c.-2299T>A), 73115793(c.-2427C>G), 73116283(c.-2917C>T), 73116787(c.-3421C>A), 73116833(c.-3467G>A), 73117706(c.-4340T>C), 73117869(c.-4503A>G), 73117971(c.-4605C>T), 73118413(c.-5047C>T), 5'UTR CDS 73108974(c.1194T>C), 73112891(c.270A>G), 3'UTR 73104372(c.4239A>C), 73104554(c.4057A>T), 73104748(c.3863G>T), 73105107(c.3504A>G), 73105115(c.3496A>G), 73105116(c.3495T>A), 73105117(c.3494T>A), 73105119(c.3492G>A), 73105120(c.3491G>A), 73105215(c.3396T>C), 73105239(c.3372A>G), 73105253(c.3358T>C), 73105269(c.3342T>C), 73105287(c.3324T>C), 73105353(c.3258C>T), 73105382(c.3229G>A), 73105414(c.3197C>T), 73105418(c.3193C>T), 73106002(c.2609T>A), 73106003(c.2608T>A), 73106004(c.2607T>A), 73106065(c.2546T>C), 73106198(c.2413A>C), 73106229(c.2382T>A), 73106619(c.1992A>G), 73106632(c.1979C>A), 73107213(c.1398A>C), 73107244(c.1367G>C), 73107271(c.1340C>T), 73107551(c.1060T>C), 73107570(c.1041G>A), 73107713(c.898G>A), 73107747(c.864C>T), 73107797(c.814G>T), 73107801(c.810T>G), 73107802(c.809G>T), 73107828(c.783A>G), 73107896(c.715G>T), 73107984(c.627A>G), 73108099(c.512T>A), 73108524(c.87G>T), INTRON 73109469(c.819-120A>G), 73109720(c.819-371G>T), 73109721(c.819-372T>G), 73109774(c.819-425T>C), 73109873(c.819-524C>T), 73109916(c.819-567C>A), 73110029(c.819-680T>C), 73110048(c.819-699T>G), 73110135(c.819-786G>C), 73110204(c.819-855G>A), 73110546(c.819-1197C>A), 73110723(c.819-1374C>T), 73110724(c.819-1375A>C), 73110739(c.819-1390C>T), 73111015(c.818+1328G>A), 73111119(c.818+1224C>G), 73111246(c.818+1097C>T), 73111249(c.818+1094C>T), 73111252(c.818+1091C>T), 73111425(c.818+918T>A), 73111427(c.818+916T>A), 73111429(c.818+914T>A), 73111518(c.818+825G>A), 73111565(c.818+778C>T), 73111782(c.818+561T>C), 73111929(c.818+414G>T), -1kb 73098795(c.9816G>A), 73099479(c.9132G>T), 73099554(c.9057A>G), 73100047(c.8564C>T), 73100441(c.8170G>A), 73101225(c.7386A>T), 73101456(c.7155T>C), 73101549(c.7062A>G), 73101636(c.6975C>G), 73101688(c.6923G>A), 73101810(c.6801T>C), 73101892(c.6719A>G), 73101971(c.6640C>T), 73102068(c.6543A>T), 73102113(c.6498A>T), 73102212(c.6399A>T), 73102265(c.6346G>A), 73102438(c.6173A>G), 73102458(c.6153A>G), 73102590(c.6021T>C), 73102805(c.5806T>A), 73102846(c.5765G>A), 73103060(c.5551G>A), 73103438(c.*5173C>T),
Insertions	+1kb 73114024 (c.-659_-658insT), 73116924 (c.-3559_-3558insA), 5'UTR CDS 3'UTR 73104809 (c.3801_3802insCT), 73105125 (c.3485_3486insTG), 73105269 (c.3341dupG), INTRON -1kb 73101225 (c.7385dupT), 73101381 (c.7226_7229dupGTTT), 73102124 (c.6486_6487insTT), 73103202 (c.*5408dupA),
Deletions	+1kb 73114233 (c.-875_-868delATGTGTGT), 73117068 (c.-3706_-3703delAAAG), 73118441 (c.-5079_-5076delACTT), 5'UTR CDS 3'UTR 73105443 (c.3167delG), 73105940 (c.2668_2670delGTT), 73106326 (c.2281_2284delAAAA), 73107672 (c.938delA), INTRON -1kb 73099937 (c.8669_8673delAGTGT), 73100470 (c.8140delC), 73102132 (c.6467_6478delCTATGACTATGA), 73102577 (c.6032_*6033delTG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	0
synonymous substitutions	73108974 (p.Ser398Ser), 73112891 (p.Pro90Pro),
non-synonymous substitutions
B6 transcript (ENSMUST00000175693)	MIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAAASRVSREE GAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLDRLARFLWS LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGA SDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNG VILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATT SYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQ FLNGSIGFSPLQLPPVSVAASQGKSFIWYQQCTRACVG*
MSMv4 transcript	MIASAADIKQENGMESASEGQEAHREVAGGAAAGLSPPAPAPFPLEPGDAAAASRVSREE GAAAAGAADQVQLHSELLGRHQHAAAAQPPLAFSPDHVACVCEALQQGGNLDRLARFLWS LPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAE RARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRH LAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTEDESSKGHEDLSPHPLSGA SDGVTNLSLSSHVEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSPVFLNGNSFIQGHNG VILNGLNVGNTQTVSLNPPKMSSNIVGNGIAMTDILGSTSQDVKEFKVLQSSAVNSAATT SYSPSAPVSFPGLIPCTEVKREGIQTVASQDGGSVVTFTTPVQINQYGIVQIPNSGANGQ FLNGSIGFSPLQLPPVSVAASQGKSFIWYQQCTRACVG*
homology	100.00 (519 / 519)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Six4 (ENSMUSG00000034460)
Transcript ID	ENSMUST00000175693

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........TCCCAACTGAAGATAGCCACATTGCACCTCCTCCCTTCAGCCTCAACCCT GGCGGAGCAATCCTAGCAAGGGTTGCTGATTCTGTCCGGATCTCTTCCAATAGACCCGCA TATAGAGATGGTGTTCTTCCCAGACCTATCTATCACCTTCAAAGAGAAACTATTTATCCA TTCCAGCACCACATCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTAGGGGGGTGCTGATGGTATCCACATTTTGAATGTTTCTA CTATGGTAAATAGATTTATGCCCTAGTCCATTATAATTTAGCTCTCTTCTATACTACTTA CCCAGTATAAACATCCAGGTTTATTTTCTATATGCTTATTTGTATTAGGTCCATCTCAGG GTTTCTGCCTTTTTTTTTTTTTAATGCTTCTTGCCTTTGTCATCTCGGTGGGCTACACAC ACTGCTCATTTCAAGGTTTTTCAAGATCTCCCCCTCCGGAATTTTCATTACTACCAATGC TTCTCTATCAGAGCATTCCTTAGTGCTGTTCTTGACTCTTGAATACACATCCTTAATAAA GACATCCCTTAGTTTGGGGGGTGGGGGGAGGAGGTGCTGGGGAGCTTCGGAATTAGTCTC TGAAGTTTTGTTATCTACATACTGAGGGTGGTCTCTTTGTTAAAATTTTAGCTGTCCAGA CTTTAAGGTCACGCGATTAGTATTCCCTTGGGAATCACTGGGCCTTTCTTTGAAAGAGCT GTCCAATTTTCAGGCCACACTAAATAACTGCCCATTCAGAAGCTTGGCCAGAAAAGAATG TCGGTGTTTTCCGGCAGGTAAAGGTGCCTGGGGGTCAGGGAGAGAGGGAAAGGCAAGGGG TGGAGTGGGAGGCGGGTGATCGACAGGGATAGAAACGGTGTCTCCTCCTCCCACTGAATG CGAAATAGCCAATGGGGTGGCTCGGCCGGGCCGGCCGGGCGGCCAGTGCC
1	EXON 1	73113364	73113456	-	0	93	ATATAGTATGCAGCAACCGGAGGAGTCACGTTGGGGGAACGGCAGAAAGCAGCTATCCGT TTACACTACTTTGCTCTAGCAGCTATCTTAATG
	INTRON 1 - 2	73113158	73113363			206	GTGACTGCGTGGCCTGGGGGAAACC..........GTCCTCTTCCTCCCCCACCGGGCAG
2	EXON 2	73112343	73113157	0	2	815	ATTGCAAGTGCGGCGGACATCAAGCAGGAGAATGGGATGGAAAGCGCCTCGGAAGGACAG GAGGCGCACCGAGAAGTGGCGGGGGGCGCGGCGGCTGGGCTGAGCCCCCCGGCTCCAGCT CCTTTCCCCCTGGAGCCGGGGGACGCCGCGGCTGCCTCCAGGGTAAGCCGGGAGGAAGGG GCAGCGGCGGCGGGAGCGGCAGATCAGGTACAACTCCACTCGGAACTTCTGGGCAGGCAC CAGCACGCAGCCGCCGCGCAGCCCCCGCTGGCCTTCTCGCCGGACCATGTCGCCTGCGTG TGCGAGGCGTTGCAGCAGGGGGGCAACCTGGACCGCCTGGCCCGGTTTCTTTGGTCCCTG CCCCAGAGCGATCTGCTACGTGGCAACGAGAGCCTTCTGAAGGCGCGAGCGCTCGTGGCC TTCCACCAGGGCATCTACCCTGAGTTGTACAGCATCCTCGAGAGCCACAGCTTCGAGTCG GCCAACCATCCGCTGCTGCAGCAGCTCTGGTACAAGGCGCGCTACACCGAGGCCGAGCGA GCGCGCGGCCGGCCGCTGGGCGCCGTGGACAAGTACCGGCTGCGCAGGAAATTCCCCTTG CCCCGCACCATCTGGGACGGCGAGGAGACGGTGTATTGTTTCAAGGAGAAGTCGCGCAAC GCGCTCAAGGAGCTCTACAAGCAGAATCGCTACCCCTCGCCGGCTGAGAAGCGGCACCTG GCCAAGATCACCGGCCTCTCCCTCACCCAGGTCAGCAACTGGTTCAAGAACCGGCGGCAG CGTGACCGAAACCCCTCCGAGACCCAGTCCAAAAG
	INTRON 2 - 3	73109350	73112342			2993	GTGAGCGCCAACTTTCCTCCTCCCC..........AATGTCTTCTCCTCCCCCTGAACAG
3	EXON 3	73103441	73109349	2	-	5909	CGAATCGGATGGCAACCCCAGTACCGAGGATGAATCCAGCAAGGGACATGAGGATTTGTC TCCTCATCCACTTTCAGGCGCATCTGATGGCGTCACCAACCTCAGCCTCTCTAGCCACGT GGAGCCAGTATATATGCAACAAATTGGAAATGCTAAGATATCACTAAGCTCGTCTGGAGT TTTGTTGAATGGAAGCTTAGTACCTGCAAGTACTTCACCTGTCTTCCTTAATGGCAATTC TTTTATTCAGGGACACAATGGAGTTATCCTTAATGGACTGAATGTGGGAAATACACAGAC AGTGTCACTGAACCCACCCAAAATGTCTTCAAACATTGTGGGCAATGGCATAGCCATGAC AGACATCCTGGGATCCACCTCCCAGGATGTGAAAGAATTCAAAGTCCTCCAGAGTTCTGC TGTGAACTCAGCAGCCACCACCTCCTACAGCCCTAGTGCCCCTGTGTCATTCCCAGGGCT GATACCCTGCACTGAAGTGAAAAGAGAAGGCATTCAGACAGTGGCCTCCCAGGACGGTGG CTCTGTGGTGACTTTTACTACACCCGTGCAAATTAACCAGTATGGCATTGTCCAGATCCC TAATTCTGGAGCCAACGGCCAGTTCCTTAATGGGAGCATTGGATTCTCTCCACTGCAGCT GCCTCCTGTCTCAGTAGCAGCTTCACAAGGTAAAAGCTTCATTTGGTACCAGCAATGCAC CAGGGCATGTGTTGGTTAGTTGCTGTAAATGACAGGTTTAGTGAAAGCTATAGATCCGTG TTATTGTCCAGATACATCATTGGTTTACACAGTTACAGAACAGCCTTGATGTGTTTCCCA GTACCTAAATACTATCCAGCTTGCCTGACTTTCTTACATCCTGGGGAATGGCGTTTTATC TTCCCCCAAACAGAATGGAAAAGTACCGTTTCTAGCAGACCTTGCCAACTCTACAATTAT AGGAATATGGCAAGTCAATCAGTGCTTATAAAATAACCCAGTACTTGACGTTTTAAAATT AAAAATTAATAAAATTGCTAGGAACATAAAATTAGTCAAGCAGTTCTTTATTTGACCAGA AGACGTTTTAAAAAGAATAAACTAAAAGACAGAATGTAGTCTTGCTTGCATCGTGTTCTT CCTATAATTAACAGAAAAACCTAAAAAGACCTAAAAGAAATTTAGAAGAACATATGCTTT TCTGTTGCTCTGGATGTGTGTTGGTGTCTCCACTGTGTGGGTTTGTATTTATGAAAACAA TTGTGTCATTGTGTGTTTGTGGCTTTCCTAACTGCAGTCTGTTAGAGAAAGGAAGTAAGC CTGAGGCTGGCACATCAGTTCCTCAGGAATGTGAGTCAAATCTGTGTCACTTGTCATTTT TCTCTGTGTTGAAATAGGAACCGTTAGAATTGGGCATAGGATGCTGAGGAGCCTCATAGA GGTGGGAGATGGTTATCTTGTCCTCTCTCCTGAAAGCAGGTTTGAAAGCCCAGATTTTTA CCAAAGGTCAACCTGCAATAAGGTCAGGGTTTTGTTGTTGTTGTTGTTGTTGTTTTTGGT TTTTTTTTTTTTTACAAATCTCTCTTCTGTAGCCATGGTCTATTTCAACTATTAGAGGCA TTAGTGAAAAATAGTTACACATTTCATTCTGTGTATTTGTCTCTTTAGAGAAAAAAACCA GTAAGCCACCATGCTCCTGTAGTACACTCTTCAACTGTTTATAATCGCTCCAGATGATGT AAGAGTTAACCTAAGTCACACTCCAATTTAGGACAAAAGACAAACACCCCAGAGAAAGCC AAATTATTTATGACTCTAACCCATTTTGCCTCTTTATGAAAGTTTCCAAGCATTCTAGAG ACAACTAAGTTGCACAGAAAGTATGAGCATGGATGCATGTTAGCAGAGGAGAATGCAAAA TGCTTCTCATCTGTAATCAAGAAAAGTGCTATCACTTTAATAGCCAGAGTTGTCTTGGGG GTGGGGGTGGGAGTGGGGGAGTTGTTTTCCTCTTTTTTTTTTTTTTCCTTTCAGTTTTTC AAGACATGGTATCCCTGGCTGTCCTAGACCTGATTCTGTAGACCAGGCTGGCCTCAAACT CTGATCTGCTTGTCTCTGCTTCCAAGTGCTGGGATTCAAGTCATGAGCCACCACTGCCCA ACAATAGTTTTTCAACGGGATATTTACCAAGAGTAAGAATAACAAAAATAGCCAAGATCA AATGACCGGGCTCCCTACCCTTTGACTCTCTGGCATCAGTTTAACCAGATGGTTCCAGTA GGCAACTCCTTTGTAGTAGTTGAGTATTACAGATTGCTGGAAAGCATTTTGGAAATTTGG ACTTTATTTTTAAAAATACTAAGGTAGAGTATGGTGGTAAATGCCTGTCTATAATCCTAG CACTTAGGAGACTGAAGTTGGAAAATGGGGCTCAATGCCTGCCTGAGCTACCTAGTTTCA CAGAGCTACATTCAAGCTAAAGTAGGTTACATGGTGAGAGTCCATCTCCAAAAAATGTAC CAAACCAAAGCAAATCAAACTTACACTAAACATTCTTTAAAATTTCCAGAAACATAGTCC TTTCTTCCTAGATATAGGAAAATGTTATATAGGAAGTTATGAGGAAAAGCAGCCTGCTGA TATCTTTTTTCATTTTACAATCGGGATTTGGGGCTTTGTTTGTTTGTTTTTCTCCTTTAG CATCATTGTACAATTGTACTTTGCACCTGCGTTTGTTCTGTTCTGTTTTTGTACTGATTA ATTTGTACCTCAGTTGCAGCTATACTTAAATATCTTGTTCTAGCCAGGCATGGTGGGTGG CACATGTCTTTCATCCTCGCCCTTGGGAGGCAGAGGCAGACAGATCTCTGTGTGTTTCAG ATCAGCCTGGTCACAGAGTGAGTTCCACGACAGGCAGAGCTATATAGATAGACCCTGGCT TAAAACAGCAACAAGAACAAAATCATGTTTTATGTCTGAAGCCTTGGGTTCAATTCCCAG TCAGTACTGAAAAAAAAAAAAAATCATCCTTTGGAATATGAATCTGTTTTCCCCTTTATT TATATAAGTTGGTGTTTTTCCATGTTCAGAGAATGTTATTTTACTTGAGTTTAATAGCTG ATGGAGAAATGTTGCATATGTTGTTACTTATCACTATCAAAAACAATAATCATTTTGTGG GCATATTTGCTAGTGAACAGTTTCACAAACACACTCACACAAAGCAAAGATTAATTGTAG CTTTTTCCTCTTACAATGTTGAACTCTATAAGACTTTTAAAACACACTGAAAACCAAAGG TTTAAAATAGGGGCAGTTTGTTCATGTGTATGGCCTGGAAAAAAAAAATTTAAGTTAAAG AATATATGCAGAAATGTTTTTTTGTAAGTCTTTTTTTGTTGTTGTTGTTTTTGTTTTTTT GTTTTTTGAGACAGGGTATCTCTGTGTAGCCCTGGCTGTCATGGAACTCACTCTGTAGAC CAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAG GCATGCGCCACCACTGCCCGGCTCATAATAGTCTTTGTGTGATAATACTTATGTACTAGT AGTTAACATTTTTAAAGGAGTTCAAATATAGTCTTTTTTCTTTTGGTTTCTCATAGAAAG ACATTCCTTTGCTTATAAAAAGTGCTTAAAGATGTTGGAAGCCATGGGTGGCCCTGGGAA CTTCCTCACATACAGAGTACTGTCATCTAGACTACACAAATTCAAGAAGGGCAACGTTGA GTGACCCACTTAATTTTCTGCACTTGTAAAGGAGTTGATTAGATCTCTAATTGAAGAGTC AGGTAGATAAGTACCCCATATTAATTCTCCCCCAGAAAGCTCCCTAAATTCATCTTTCTC TCTCTGATAATATTTGGGGACCCAAGTCATCTGACTGCCATCAGTTCCCTTCCCCTTGTA AAGACTCAGGGGTTTATTTGATGGGGATTCCAGGGTTTTCATTGTCCCAAGTTCCTCACT TAAACATCTATTTTCTGCTTATACTTTTTCTTCTAGTCTCCACGGACCATTAAAGTGGGG TCTCAAAAGATGCACCCCTTTGACAGAGGCGTTAATTCTAGCCCTCTATGTTTTCCTTTA TTTTAAAAAGAGCACTCCAGGGTTACCATTCATTTCTCTGATTGCTACAACCCTGAAAAT TTAAAGCTAGCACAACAAATGGGGAGAGAGGATTGAAAAAAAGAAAAAGAAAAAACCTAG AGGGTTTTGTTGACTTGAGACTGCTTTATTGGTAGTTCGGTGGAAGTCAGAGACTTGTCT GTACAGGTTGATGTCGTTAACTTGTAAGTTCCAGAGAAACTCATTTTATGTGGTATTTTC GTTTACATTTTATGCTCAGTACCTGAGCAGTCCTAACGGAACTAGTTTGTTTTGCACTTT CTCTCATCCTAACTGGTAGAGTTAGTGATCACTAGCAACTGATTAAGAGATGGTAAGTCT GTGATAAAGAGCCAGAAGCTTGGACGGAATTTTCTCTCTTTTCTTTTTTTTCTTTTTCGT TGAGATAAGGTCTTACTGTGTAGCCCAGACTGGCCTCAAAATCAATCTTCCTGCCTCGGC TTTTATCCCCAGGTCCCACATACTTGCTTGTTTTTGATTGGTTGGCTTGTATTTTTGTTT GTTTTAATTTTTGGTGATGCTGAGGCGTGAACCCAAGGCCTGCACCTCGGTGATCCTCTC CCTAGGCCTGCTTCCTAAGCCCCCTGCAGTTCTTTCATTGGTCCTTACAATGGCATGGGA GGTTAACAAATGTAGATAAAATGTAGTTCAGTGACTGAATCTTTACCCAGCAGATAGAAA GCTCTGAGTTCAGTCAGCAGCAGTGCAAAAAGAAATACAAAATGTATCTAGAGAAAGTTA GTCGGCCTGCGTCCTCAGCCTGGGACTCTGCAGTTTACCATACTGAAGCTGAACTACCTT ACATATTTAAGTGTCACCTCTCCATAAATACTATACCTGAGGAAAAATCGTGTGTGCTAA AGGAGTGACTGTGTGTTTGTTTTTCTTTCTGTATCATTTTCATCAATGCTAATTGGTCCT CTTCCCCCTAGGTAATCTTTCAGTTACCCCAAGCACTTCGGACGGAAGCACATTTACAAG TGAGCCAGCCACAGTCCAGCACGGTAAACTTTTCCTGAGCCCTCTTACCCCCAGTGCAGT GGTATACACCGTTCCTAATTCAGGCCAGACTGTAGGAGCTGTGAAACAGGAAGGCTTAGA AAGAGGCCTGGTCTTTTCTCAGTTGATGCCTGTCAATCACAGTGCACAAGTAAATGCAAG CCTGTCTTCGGAAAATCTCTCTGGGAGTGGCCTCCATCCTCTGACCTCGTCGTTGGTTAA TGTGTCCGCCGCCCACGGTTTTTCCCTGACCCCCCCTACACTACTTAATCCCACTGAGCT CAACCCTGACCTTGCCGAGAGCCAGCCCGTGTCTGCACCTGTGGCAAGCAAATGTACTGT GTCATCTGTCAGCAACACTAACTATGCAACCCTTCAGAACTGTTCCCTTATTCCGGGGCA AGACCTATTGTCCGGCCCGATGACCCAGGCTGCCCTGGGTGAGATCGTACCCACAGCTGA AGAGCAGGTGAGCCACGCCTCAACAGCAGTCCACCAGGATTTTGTCAGAGAACAGCGCTT GGTTCTGCAGTCAGTCCCTAACATAAAAGAGAATTTCTTACAAAATTCTGAGAACAAAGC AACAAACAACTTAATGATGTTAGACTCGAAATCCAAGTACGTCCTGGACGGCATGGTTGA AGCCGGCTGTGAAGACCTGGGAACGGACAAAAAAGAGCTGGCCAAGCTCCAAACCGTCCA GTTGGATGAAGACATGCAAGACTTATAAG
	3' upstream sequence						CCTGATTCACTCCACATCCCTCCTTCTCTGCTTTAACAGGAGCAAATCCTTTTCTTTGCG AAGCCCCGAGGATGGAGAGCTTCTATTCATTTAGAGGAAAACACTGTACTTCTGCAAGCA AGCGCATCTGGCTTGGGCTGCATGAAGAGCGTAGTTAAATACACAGGAGTGGACCTGCAC TGCCGAAGCCCCTCTGGTCACATCGTGCTCGCTTTGAAACAGATGGGGCGAGGCAACAGT GAATGCATCCATCTAACCATCGTCTATCATTTAGTCAGCAGTATAACTCCACAGGCGAAA TGGAAGGTGACAGTATTTCAGATTTAAAATGCATACACCTAATTTAGGAGATTAAATAAT AGCTCCAGGCTCTTGGAAGCAATGCAGTTGGTTTTTTGTTTGTTTGTTTGTTTGTTTACT TTTACTCCATGGGCATTGAGATGGTTAAGAAACAATGGTACTCTAGACTATCATAAGGGT ATATTTTTCAAATTATGTAGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATA CACACATTCATCGTTTTCAGCATTTGGGGGAAAGGCTTGGTTTTAAGTCTCTACATGTTT CCAAATGTGATTGCTAATAGTCAAACGTGGCAGAGAAAGTTTGAGACGCCACTAAACTCT GACACAACTTGGGTACGAATGTAAATACAGGTCTCTAAGCAAGATCTGAGTAAGTACAGT GAGTTTTTATTTATACCTTGTATGTCTCCCTTCAGGCTCTGTGAACTGAAAAGAAAATGT CTTCTTACTGTTTAATTTATATTTATTGTTTGAGCGGGAATAGGACATCTTTGTTTCCAA CCAAGGTTTTCTTTTTGTTTTTGTTTTTTTTTGTTTTTGGTTTTTTTTTTTGTAATTGTT ATCAAGAGTCTATTGAGGTCAATATTAATTAACACTGAAACAGGAACTGTTAACCCCCAG TACTGGAACTTTGTCACTTCTCGTCACATCCTTCTTACTT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Six4 (ENSMUSG00000034460)
Transcript ID	ENSMUST00000175693

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 519 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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