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Target CDS Information

Gene Symbol (Gene ID) Asap1 (ENSMUSG00000022377)
Cross Reference
EMBL AC098728, AC131710, AC156573
GO GO:0043197, GO:0060271, GO:0061000
goslim_goa GO:0000902, GO:0005575, GO:0005623, ...show all
MGI_trans_name Asap1-010
OTTP OTTMUSP00000061495
OTTT OTTMUST00000110281
UniParc UPI0002467575
Uniprot/SPTREMBL H3BJM7
Vega_transcript Asap1-010, OTTMUST00000110281
Vega_translation 216970, OTTMUSP00000061495
Definition protein_id:ENSMUSP00000135047
translation:
MQAGLSGPQGLPSKAGFNGGQSYAFKGSWRPIPRTRMPDQISVSEFIAETTEDYNSPTTS
SFTTRLHNCRNTVTLLEEALDQDRTALQKVKKSVKAIY

Chromosome 15
Length
Position(start - end)
105140
64208497 - 64313638
Orient to Chromosome minus
Link Location : (15:64208497-64313638)
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Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Asap1 (ENSMUSG00000022377)
Transcript ID ENSMUST00000175963
Reports
substitution
cSNPs3
Insertion85
Deletion109
SNPs
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Insertions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
Deletions
+1kb
5'UTR
CDS
3'UTR
INTRON
-1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num1
non-synonymous num2
synonymous substitutions 64313600 (p.Ser13Ser),
non-synonymous substitutions 64313545 (p.Ile32Val), 64313569 (p.Ala24Thr),
B6 transcript
(ENSMUST00000175963)
MQAGLSGPQGLPSKAGFNGGQSYAFKGSWRPIPRTRMPDQISVSEFIAETTEDYNSPTTS
SFTTRLHNCRNTVTLLEEALDQDRTALQKVKKSVKAIY
MSMv4 transcript
MQAGLSGPQGLPSKAGFNGGQSYTFKGSWRPVPRTRMPDQISVSEFIAETTEDYNSPTTS
SFTTRLHNCRNTVTLLEEALDQDRTALQKVKKSVKAIY
homology97.96 (98 / 98)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Asap1 (ENSMUSG00000022377)
Transcript ID ENSMUST00000175963
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AACAACAGTTCATTTTTACTGTTTATGTCACACACATAGAGGAGTGCTGC
CAGCTCAGTAGACAGGGCAGGTACTAGATGACAACTGGGGTGTGGGGGGTGGGACCAGAC
TGGCTCACAGCCCTGAGGAAGACAAATCCTTTCAGAGGGAAGCCCCAGTGCTCACTGATT
TTTCTCGATGATTTGCTCTCAGTACTTTATAGGGGAGCATGGGATTTCTGAGGCGCAGGG
AGCTTAATTAGTCCAAGCTAGTGAGGGTCATATTTGTTCCAACTTACAGAATTTTCCAGA
TGCTGTGAGAAATGAGTTAGGATTCCCTTCTGGAATGTTCATTCTCCAAATGCTACATCT
TGCAGCCCTGGCAACCAGTGAGCCTGCCCTTGTGGGGTGGTCAGCTGCCAGTCTCCTCCT
GCCTTATTTTCTCCCTGAGAGCTTCACCCTCCATGTCTCCCAAACCAAACTTTTAAAGTA
CTGAGGGGAGAAAGTACTCTTGTTTATGTTTAACCTCTTTATTCACTAGTTTTTTTTAAA
AGGTCAGTTTGCCAGGGTTGTGTTTCTTTATGCTCATTCCCTTAGCAAGTTCTTCCTGTA
GTAGGCGGAGACACTTCCCTGCCTTGGAGAGCCCTGGTAGGAACCGCAGTGGAGGCACAG
TGCACACCCAATTCGGTCAAGCCAGGAAGAGAAACAGCACACATTTTAACCCATTTTTTC
CTATGCAGAGAGCAAGTCCTCATCCATGAACTCAGCCTCCTGCATGAGGGTCCCTGTCTT
CTACTTTCATGGGAGGCAGTTAGGGGTCCAAGATTCCCAGCCAACAGGGTATCGAGTGGT
GTATCCATTCTGTTCTGCACACTTTGACTGAGCCTTCTCTGACCATGGTTTATGTATGGC
TCTGTCATTTTCTCCTACTCCTCCTCTGTATTGCCTATTTGTCTGGTCCTCTGCTGCAAA
GCAAATTCCAAGACAGCAGGAATGTGGCCCTTGCCGACATCGCTCATCTC
1 EXON 1 64313532 64313810 - 2 279
AGAATTTGTCAGCTTGTGAGGCGAACCTTTTCCTCTTGACATGCAGTCTTCTCCTCCCTC
CCTGCCGGTCCTCACTCAAGACAAGCCCTCTCCGTGGGTCCCTGAGCCACACGACCCACA
CGCGGCCAGAAAGGCCAGCGAACACAACCTCTAGCTAGCTATATCGGACGGTATGCAGGC
AGGTCTGAGTGGGCCACAGGGCTTGCCTTCTAAAGCAGGCTTTAATGGAGGCCAGTCATA
CACTTTCAAGGGCTCCTGGAGGCCAGTCCCAAGGACTAG
INTRON 1 - 2 64312476 64313531 1056
GTGGGTTTTGTTGATACCATTCTCA..........TTGTGTCTCGTCCCTCCCGCGGCAG
2 EXON 2 64312349 64312475 2 0 127
GATGCCGGACCAGATCTCCGTGTCCGAGTTCATCGCCGAGACCACCGAGGACTACAACTC
GCCCACCACGTCCAGCTTCACCACGCGGCTGCACAACTGCAGGAACACCGTCACGCTGCT
GGAGGAG
INTRON 2 - 3 64208557 64312348 103792
GTAGGCGGCGGCCTGGCAGCTGGGT..........CCCTTTTCCTCTCTTTCTCTTTTAG
3 EXON 3 64208497 64208556 0 - 60
GCTCTAGACCAAGATAGAACAGCCCTACAGAAAGTGAAGAAATCTGTAAAAGCAATATAT
3' upstream sequence
AATTCCGGTCAAGGTAAGTACTTAACTCATCCTCCCACAACTCATTTATACGCTGTCACA
TTGTAGGATATTCACAAAAGACCTTAACAGGTGACAAAGATAAGTAGGCCAAAGAACTGA
GCTTCTCCCCTCTTGTCCCCGTCTCCACGCTCAGCCGAAGCCAGTCGTTGTTTCTGTAGT
ATAAGTCACTGTTAGTATCTTCTCAAGAACTCGGGAGAGTGGATGGAGGCTGGTGGTTAT
CACAGACGACAGGAGGTACCTACAGTCTCTTTGTGTGGTTGCTCAGCCTGTGATCTGGTA
ACTTCAGTCAAACATGGAATAGTCTCTTCCTTGTTGAGTGTGACTGTACACACTGAGAAC
CAGTACTGACCATGGACCCTGCAGGGGAGTTAGGGAGGGAGGGAAAAGGTTAAAATTCTT
ACCTTCACTGACTGCCCACTGTCATTTTTAAATGATGGTAGAGAACTTAGGTAACTAAAT
GTTTTAACATTGGTCCAGAGACCTTTTTGTAACTCTCTTAACAACATCATTTTGTTTTAT
AATAATGAATTATTAATTACATTATATATTATTTATATAATTTATGTTTATATACATGAA
TATTATTTATATAATGTAAATATTTTAGTATTTTAATTATATGGTAAATCCACATAAATT
AAATTAGTGGGTACCCACGAGAAGTGGTAGGCTCTAGCCCCCCAGGAAAGGGTTGGGACG
AATGTTTCAAGGTCTCTGAGTCACCTTGATACCGTTTTTTGCAGCCACAGCTTACTTGCA
GGAAGTCACTTCCCTAACACATCAGTTGTCTCTAGTGCACAGAAAGCCTGGAAGGGGAAG
ATGGCTGCCTGTGAAGGAAAGAGCGCTTGCTTTGAAGCCAACAGTGAACAGAAAAGTACC
GTGAACTGCTTACTCAGCTTTCTGTACACAGGGTAGGACCATTAGAGACTTGTTCCAGGA
CTTAGTGTACCTCATTTCTTGTTATATCACTGAAGTCTCA..........

Sequence Detail Report

Gene Symbol (Gene ID) Asap1 (ENSMUSG00000022377)
Transcript ID ENSMUST00000175963
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 98 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information