Gene Symbol (Gene ID) | Trnt1 (ENSMUSG00000013736) | ||||||||||
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Cross Reference |
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Definition |
protein_id:ENSMUSP00000144850
translation: MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELR IAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENF EVTTLRIDVTTDGR |
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Chromosome | 6 | ||||||||||
Length Position(start - end) |
4608 106769856 - 106774465 |
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Orient to Chromosome | plus | ||||||||||
Link | Location :
(6:106769856-106774465) / |
Click to browse alignment view. |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | gene |
link |
VEGA
Ensembl MGI |
xref | |
definition |
locus_tag : Trnt1 note : tRNA nucleotidyl transferase, CCA-adding, 1 [Source:MGI Symbol;Acc:MGI:1917297] |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000113247 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000113249 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000113248 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000057578 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000205163 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | mRNA |
link |
VEGA
Ensembl MGI |
xref | |
definition |
note : transcript_id=ENSMUST00000204782 |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
CCDS:CCDS57443.1
Uniprot/SWISSPROT:Q8K1J6 RefSeq_peptide:NP_001229289 RefSeq_mRNA:NM_001242360.1 Vega_transcript:OTTMUST00000057362 Vega_transcript:Trnt1-002 UCSC:uc029vxx.1 Fantom:2610044E04 Fantom:7420417A21 Fantom:I1C0014N12 Fantom:I830083H20 EMBL:AB063106 EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804 EMBL:BC031764 GO:GO:0000049 GO:GO:0001680 GO:GO:0004810 GO:GO:0005524 GO:GO:0005622 GO:GO:0005739 GO:GO:0008033 GO:GO:0009022 GO:GO:0042780 GO:GO:0052927 GO:GO:0052928 GO:GO:0052929 MGI_trans_name:Trnt1-002 Vega_translation:198418 Vega_translation:OTTMUSP00000027661 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006399 goslim_goa:GO:0008150 goslim_goa:GO:0016779 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH31764.1 protein_id:BAB27827.3 protein_id:BAB70663.1 protein_id:BAE22664.1 protein_id:BAE31459.1 protein_id:BAE39032.1 OTTP:OTTMUSP00000027661 OTTT:OTTMUST00000057362 UniParc:UPI00005ABBE7 |
definition |
note : transcript_id=ENSMUST00000113247 protein_id : ENSMUSP00000108873 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRPGIVLGDLTTEK |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
CCDS:CCDS20397.1
Uniprot/SWISSPROT:Q8K1J6 RefSeq_peptide:NP_081572 RefSeq_mRNA:NM_027296.3 Vega_transcript:OTTMUST00000057363 Vega_transcript:Trnt1-003 UCSC:uc012epy.2 Fantom:2610044E04 Fantom:7420417A21 Fantom:I1C0014N12 Fantom:I830083H20 EMBL:AB063106 EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804 EMBL:BC031764 GO:GO:0000049 GO:GO:0001680 GO:GO:0004810 GO:GO:0005524 GO:GO:0005622 GO:GO:0005739 GO:GO:0008033 GO:GO:0009022 GO:GO:0042780 GO:GO:0052927 GO:GO:0052928 GO:GO:0052929 MGI_trans_name:Trnt1-003 Vega_translation:198419 Vega_translation:OTTMUSP00000027662 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006399 goslim_goa:GO:0008150 goslim_goa:GO:0016779 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH31764.1 protein_id:BAB27827.3 protein_id:BAB70663.1 protein_id:BAE22664.1 protein_id:BAE31459.1 protein_id:BAE39032.1 OTTP:OTTMUSP00000027662 OTTT:OTTMUST00000057363 UniParc:UPI0000028458 |
definition |
note : transcript_id=ENSMUST00000113249 protein_id : ENSMUSP00000108875 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLGVAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFVIDSREPDATARVCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRKVGISSGKEIGALLQQLREQWKKSGYRMEKDELLSYIKKT |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
CCDS:CCDS20397.1
Uniprot/SWISSPROT:Q8K1J6 Vega_transcript:OTTMUST00000057364 Vega_transcript:Trnt1-004 UCSC:uc009dcy.2 Fantom:2610044E04 Fantom:7420417A21 Fantom:I1C0014N12 Fantom:I830083H20 EMBL:AB063106 EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804 EMBL:BC031764 GO:GO:0000049 GO:GO:0001680 GO:GO:0004810 GO:GO:0005524 GO:GO:0005622 GO:GO:0005739 GO:GO:0008033 GO:GO:0009022 GO:GO:0042780 GO:GO:0052927 GO:GO:0052928 GO:GO:0052929 MGI_trans_name:Trnt1-004 Vega_translation:198420 Vega_translation:OTTMUSP00000027663 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006399 goslim_goa:GO:0008150 goslim_goa:GO:0016779 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH31764.1 protein_id:BAB27827.3 protein_id:BAB70663.1 protein_id:BAE22664.1 protein_id:BAE31459.1 protein_id:BAE39032.1 OTTP:OTTMUSP00000027663 OTTT:OTTMUST00000057364 UniParc:UPI0000028458 |
definition |
note : transcript_id=ENSMUST00000113248 protein_id : ENSMUSP00000108874 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLGVAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFVIDSREPDATARVCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRKVGISSGKEIGALLQQLREQWKKSGYRMEKDELLSYIKKT |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
CCDS:CCDS20397.1
Uniprot/SWISSPROT:Q8K1J6 RefSeq_peptide:NP_001229287 RefSeq_mRNA:NM_001242358.1 RefSeq_mRNA_predicted:XM_006506581.2 RefSeq_peptide_predicted:XP_006506644.1 Vega_transcript:OTTMUST00000057361 Vega_transcript:Trnt1-001 UCSC:uc009dcz.2 Fantom:2610044E04 Fantom:7420417A21 Fantom:I1C0014N12 Fantom:I830083H20 EMBL:AB063106 EMBL:AK011764 EMBL:AK135791 EMBL:AK152739 EMBL:AK166804 EMBL:BC031764 GO:GO:0000049 GO:GO:0000049 GO:GO:0001680 GO:GO:0001680 GO:GO:0004810 GO:GO:0004810 GO:GO:0005524 GO:GO:0005622 GO:GO:0005622 GO:GO:0005739 GO:GO:0005739 GO:GO:0008033 GO:GO:0009022 GO:GO:0042780 GO:GO:0042780 GO:GO:0052927 GO:GO:0052928 GO:GO:0052929 MGI_trans_name:Trnt1-001 Vega_translation:198421 Vega_translation:OTTMUSP00000027660 goslim_goa:GO:0003674 goslim_goa:GO:0003723 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005739 goslim_goa:GO:0006399 goslim_goa:GO:0008150 goslim_goa:GO:0016779 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:AAH31764.1 protein_id:BAB27827.3 protein_id:BAB70663.1 protein_id:BAE22664.1 protein_id:BAE31459.1 protein_id:BAE39032.1 OTTP:OTTMUSP00000027660 OTTT:OTTMUST00000057361 UniParc:UPI0000028458 |
definition |
note : transcript_id=ENSMUST00000057578 protein_id : ENSMUSP00000060900 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYADLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDRPGDHDHETLEAIAENAKGLAGISGERIWVELKKILTGDHVNHLIHLIYDLGVAPHIGLPANANLEEFNKVSKNVEGFSPKPMTLLASLFKVQDDVTKLDLRLKISKEEKNLGLFIVKNRKDLIKATDSSEPLKPYQDFVIDSREPDATARVCELLKYQGEHGLLKEMQQWSVPPFPVSGHDIRKVGISSGKEIGALLQQLREQWKKSGYRMEKDELLSYIKKT |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
Vega_transcript:OTTMUST00000139387
Vega_transcript:Trnt1-007 MGI_trans_name:Trnt1-007 Vega_translation:198422 Vega_translation:OTTMUSP00000073143 OTTP:OTTMUSP00000073143 OTTT:OTTMUST00000139387 |
definition |
note : transcript_id=ENSMUST00000205163 protein_id : ENSMUSP00000144943 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLN |
name | Trnt1 (ENSMUSG00000013736) (Detail) |
---|---|
type | CDS |
link |
VEGA
Ensembl MGI |
xref |
Vega_transcript:OTTMUST00000139388
Vega_transcript:Trnt1-008 MGI_trans_name:Trnt1-008 Vega_translation:198423 Vega_translation:OTTMUSP00000073144 OTTP:OTTMUSP00000073144 OTTT:OTTMUST00000139388 |
definition |
note : transcript_id=ENSMUST00000204782 protein_id : ENSMUSP00000144850 translation : MQSVLYPWHRQVLRCSWSRLCLLKRYLFTMKLQSPEFQSLFTEGLKSLTELFAKENHELRIAGGAVRDLLNGVKPQDVDFATTATPTQMKEMFQSAGIRMINNKGEKHGTITARLHEENFEVTTLRIDVTTDGR |
name | |
---|---|
type | misc_feature |
link | |
xref | |
definition |
note : contig AC153848.5 68621..187830(1) |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | misc_RNA |
link |
VEGA
Ensembl MGI |
xref |
Vega_transcript:OTTMUST00000057365
Vega_transcript:OTTMUST00000057365 MGI_trans_name:Trnt1-005 OTTT:OTTMUST00000057365 |
definition |
note : retained_intron note : transcript_id=ENSMUST00000147084 |
name | Trnt1 (ENSMUSG00000013736) |
---|---|
type | misc_RNA |
link |
VEGA
Ensembl MGI |
xref |
Vega_transcript:OTTMUST00000057366
Vega_transcript:OTTMUST00000057366 MGI_trans_name:Trnt1-006 OTTT:OTTMUST00000057366 |
definition |
note : processed_transcript note : transcript_id=ENSMUST00000154026 |