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name
Gm9947 (ENSMUSG00000054493)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gm9947
note
: predicted gene 9947 [Source:MGI Symbol;Acc:MGI:3642739]
name
Msc (ENSMUSG00000025930)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Msc
note
: musculin [Source:MGI Symbol;Acc:MGI:1333884]
name
Msc (ENSMUSG00000025930)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027062
name
Msc (ENSMUSG00000025930)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000190719
name
Msc (ENSMUSG00000025930)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14825.1
Uniprot/SWISSPROT:
O88940
RefSeq_peptide:
NP_034957
RefSeq_mRNA:
NM_010827.2
Vega_transcript:
Msc-001
Vega_transcript:
OTTMUST00000125487
UCSC:uc007aja.2
EMBL:
AF087035
EMBL:
AF108216
EMBL:
BC103592
EMBL:
BC103593
EMBL:
BC103594
EMBL:
BC103623
GO:
GO:0000122
GO:
GO:0000980
GO:
GO:0001206
GO:
GO:0005634
GO:
GO:0006351
GO:
GO:0014707
GO:
GO:0046983
GO:
GO:0060021
GO:
GO:0060539
MGI_trans_name:
Msc-001
Vega_translation:
178746
Vega_translation:
OTTMUSP00000068013
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAC69869.1
protein_id:
AAD10053.1
protein_id:
AAI03593.1
protein_id:
AAI03594.1
protein_id:
AAI03595.1
protein_id:
AAI03624.1
OTTP:
OTTMUSP00000068013
OTTT:
OTTMUST00000125487
UniParc:
UPI0000022748
definition
note
: transcript_id=ENSMUST00000027062
protein_id
: ENSMUSP00000027062
translation
: MSTGSVSDPEDSEMRGLQRVYPAPASKRPPLLRMERGYGSPSDISSAEEEDGEEEPGSLGAAGGCKRKRLRGADAGGAGGRAGGAGKKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHPVNLTWPFVVSGRPDSDSKDVSAANRLCGTSA
name
Msc (ENSMUSG00000025930)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Msc-003
Vega_transcript:
OTTMUST00000125488
Uniprot/SPTREMBL:
A0A087WRR6
EMBL:
AC115876
GO:
GO:0005634
MGI_trans_name:
Msc-003
Vega_translation:
178747
Vega_translation:
OTTMUSP00000068014
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000068014
OTTT:
OTTMUST00000125488
UniParc:
UPI0004620FDA
definition
note
: transcript_id=ENSMUST00000190719
protein_id
: ENSMUSP00000140741
translation
: AARHQAFQTGHAAPGFQLHRAPAPAAAGGPLRGQLCAPCEPEKSCGQPMRKA
name
type
misc_feature
link
xref
definition
note
: contig AC115876.18 18989..163698(1)
name
Gm9947 (ENSMUSG00000054493)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000125543
Vega_transcript:
OTTMUST00000125543
UCSC:uc007ajb.1
Clone_based_vega_transcript:RP24-356G6.1-002
MGI_trans_name:
Gm9947-002
OTTT:
OTTMUST00000125543
RNACentral:URS000075FC1F
definition
note
: antisense
note
: transcript_id=ENSMUST00000187401
name
Gm9947 (ENSMUSG00000054493)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000125491
Vega_transcript:
OTTMUST00000125491
Clone_based_vega_transcript:RP24-356G6.1-001
MGI_trans_name:
Gm9947-001
OTTT:
OTTMUST00000125491
RNACentral:URS000077A8E8
definition
note
: antisense
note
: transcript_id=ENSMUST00000067599
name
Msc (ENSMUSG00000025930)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000125490
Vega_transcript:
OTTMUST00000125490
MGI_trans_name:
Msc-002
OTTT:
OTTMUST00000125490
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000190471
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.