VariantTable
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BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Efhc1 (ENSMUSG00000041809)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Efhc1
note
: EF-hand domain (C-terminal) containing 1 [Source:MGI Symbol;Acc:MGI:1919127]
name
Efhc1 (ENSMUSG00000041809)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000038447
name
Efhc1 (ENSMUSG00000041809)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS48227.1
RefSeq_peptide:
NP_082250
RefSeq_mRNA:
NM_027974.1
Vega_transcript:
Efhc1-001
Vega_transcript:
OTTMUST00000074047
Uniprot/SPTREMBL:
B2CKC6
UCSC:uc007alf.2
EMBL:
AC156980
EMBL:
EU520262
GO:
GO:0005509
GO:
GO:0005515
GO:
GO:0005813
GO:
GO:0005813
GO:
GO:0005929
GO:
GO:0021795
GO:
GO:0021795
GO:
GO:0072686
GO:
GO:0072686
MGI_trans_name:
Efhc1-001
Vega_translation:
178815
Vega_translation:
OTTMUSP00000038413
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0005929
goslim_goa:
GO:0008150
goslim_goa:
GO:0040011
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
goslim_goa:
GO:0048870
protein_id:
ACB20692.1
OTTP:
OTTMUSP00000038413
OTTT:
OTTMUST00000074047
UniParc:
UPI0000024705
definition
note
: transcript_id=ENSMUST00000038447
protein_id
: ENSMUSP00000042343
translation
: MGTNPVHGLPFLPGSSFTDSTKTAFHRSQTLNYRNGYAVVRRPTMGIGGDRLHYNQLSQAELDELANKAPILTYGPLKQAPLAEFVPAHVAFDKKVLKFSAYFQEDVPISMEEHYRIRHVNIYYYLEDDSMSVIEPVVENSGIPQGKLIKRQRFTKNDMGDHYHWKDLNRGINLTVYGKTFRIVDCDRFTQDFLESQGIELNPSEKIPLDPYTQLRKEPVRKYVTPSDFDQLKQFLTFDKQVLRFYAIWDDTDSLFGECRHYIIHYYLMDDTVEIREVHERNNGRDPFPLLMNRQRMPKVLVENAKNFPKCVLEISDQEVLEWYTAKDFIVGKPLTILGRTFFIYDCDPFTRQFYKDKFGMPDLPPVDVTKKEPPPVKQELPPYNGYGLIEDSAQNCFALIPKAPRKDVVKMLMNDNKVLRYLAALESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKFLGRTKVVKSFSPVDNPIYYSPSDFFIGAVIEVFGHRFVILDTDEYVLKYMESNASQYSPEALASIQNRIQKPELPAPELESKQATGEPMVQGTEESKVQDLDALIDQIHMHLKYNSCKENLRETFQMYDKDESGYVDRETFFKICETLNVPVDDSLIKELIRLCTHGEGRINYYNFVRAFSN
name
type
misc_feature
link
xref
definition
note
: contig AC156980.9 1..183771(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.