VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Mgat4a (ENSMUSG00000026110)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Mgat4a
note
: mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
name
Mgat4a (ENSMUSG00000026110)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000151952
name
Mgat4a (ENSMUSG00000026110)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000042161
name
Mgat4a (ENSMUSG00000026110)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000154819
name
Mgat4a (ENSMUSG00000026110)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14893.1
Uniprot/SWISSPROT:
Q812G0
RefSeq_peptide:
NP_776295
RefSeq_mRNA:
NM_173870.3
RefSeq_mRNA_predicted:
XM_006496022.2
RefSeq_mRNA_predicted:
XM_006496024.1
RefSeq_mRNA_predicted:
XM_011238526.1
RefSeq_peptide_predicted:
XP_006496085.1
RefSeq_peptide_predicted:
XP_006496087.1
RefSeq_peptide_predicted:
XP_011236828.1
Vega_transcript:
Mgat4a-001
Vega_transcript:
OTTMUST00000085506
UCSC:uc007arv.3
Fantom:
B020014J19
EMBL:
AB053217
EMBL:
AB053225
EMBL:
AK163327
GO:
GO:0000139
GO:
GO:0006487
GO:
GO:0008375
GO:
GO:0008454
GO:
GO:0016021
GO:
GO:0046872
GO:
GO:0070062
GO:
GO:0070062
MGI_trans_name:
Mgat4a-001
Vega_translation:
179031
Vega_translation:
OTTMUSP00000046192
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005794
goslim_goa:
GO:0005975
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016757
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
BAC55018.1
protein_id:
BAC55085.1
protein_id:
BAE37301.1
OTTP:
OTTMUSP00000046192
OTTT:
OTTMUST00000085506
Reactome:
R-MMU-392499
Reactome:
R-MMU-446203
Reactome:
R-MMU-597592
Reactome:
R-MMU-948021
Reactome:
R-MMU-975576
Reactome:
R-MMU-975577
UniParc:
UPI0000001D01
definition
note
: transcript_id=ENSMUST00000151952
protein_id
: ENSMUSP00000114175
translation
: MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNTIVQQFRRAGAETNGSKTALSTISDNTIKLLKELTSKKSLRVPSIYYHLPHLLQNERSLQPAVQIGSGRTGVSIVMGIPTVKREVKSYLVETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANLEKEFSREISSGLLEIISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKVHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVDVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFRLSVIQNSAVWAILNEIHIKKVTS
name
Mgat4a (ENSMUSG00000026110)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14893.1
Uniprot/SWISSPROT:
Q812G0
RefSeq_mRNA_predicted:
XM_006496026.1
RefSeq_mRNA_predicted:
XM_011238526.1
RefSeq_peptide_predicted:
XP_006496089.1
RefSeq_peptide_predicted:
XP_011236828.1
UCSC:uc007arv.3
Fantom:
B020014J19
EMBL:
AB053217
EMBL:
AB053225
EMBL:
AK163327
GO:
GO:0000139
GO:
GO:0006487
GO:
GO:0008375
GO:
GO:0008454
GO:
GO:0016021
GO:
GO:0046872
GO:
GO:0070062
MGI_trans_name:
Mgat4a-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005794
goslim_goa:
GO:0005975
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016757
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
BAC55018.1
protein_id:
BAC55085.1
protein_id:
BAE37301.1
Reactome:
R-MMU-392499
Reactome:
R-MMU-446203
Reactome:
R-MMU-597592
Reactome:
R-MMU-948021
Reactome:
R-MMU-975576
Reactome:
R-MMU-975577
UniParc:
UPI0000001D01
definition
note
: transcript_id=ENSMUST00000042161
protein_id
: ENSMUSP00000038894
translation
: MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNTIVQQFRRAGAETNGSKTALSTISDNTIKLLKELTSKKSLRVPSIYYHLPHLLQNERSLQPAVQIGSGRTGVSIVMGIPTVKREVKSYLVETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANLEKEFSREISSGLLEIISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKVHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVDVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFRLSVIQNSAVWAILNEIHIKKVTS
name
Mgat4a (ENSMUSG00000026110)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS69882.1
Uniprot/SWISSPROT:
Q812G0
RefSeq_peptide:
NP_001277730
RefSeq_mRNA:
NM_001290801.1
RefSeq_mRNA_predicted:
XM_006496025
Vega_transcript:
Mgat4a-002
Vega_transcript:
OTTMUST00000085524
UCSC:uc007aru.2
Fantom:
B020014J19
EMBL:
AB053217
EMBL:
AB053225
EMBL:
AK163327
GO:
GO:0000139
GO:
GO:0006487
GO:
GO:0008375
GO:
GO:0008454
GO:
GO:0016021
GO:
GO:0046872
GO:
GO:0070062
MGI_trans_name:
Mgat4a-002
Vega_translation:
179032
Vega_translation:
OTTMUSP00000046206
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005794
goslim_goa:
GO:0005975
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016757
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
BAC55018.1
protein_id:
BAC55085.1
protein_id:
BAE37301.1
OTTP:
OTTMUSP00000046206
OTTT:
OTTMUST00000085524
Reactome:
R-MMU-392499
Reactome:
R-MMU-446203
Reactome:
R-MMU-597592
Reactome:
R-MMU-948021
Reactome:
R-MMU-975576
Reactome:
R-MMU-975577
UniParc:
UPI00001ED051
definition
note
: transcript_id=ENSMUST00000154819
protein_id
: ENSMUSP00000121181
translation
: MRLRNGTVATALVFVTSFLTLSWYTTWQNGKEKLIAYQREFLALKERLRVAEHRISQRSSELNTIVQQFRRAGAETNGNNTIKLLKELTSKKSLRVPSIYYHLPHLLQNERSLQPAVQIGSGRTGVSIVMGIPTVKREVKSYLVETLHSLIDNLYPEEKLDCVIVVFIGETDLDYVHSVVANLEKEFSREISSGLLEIISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLALVVEFILMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLTDKDYMKPLLLKVHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPTAGDYILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVDVLPLKSDSLEISKETKDKRLEDGYFRIGKFEYGVAEGIVDPGLNPISAFRLSVIQNSAVWAILNEIHIKKVTS
name
type
misc_feature
link
xref
definition
note
: contig AC140321.3 20652..215225(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.